Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 3.9e-184 648.3 401 100.0
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 3.5e-156 555.4 405 86.2
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 2.2e-155 552.7 373 93.6
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 2.7e-148 529.3 406 84.5
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 1.9e-138 496.5 403 79.2
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 1.2e-129 467.2 334 75.1
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 1.6e-129 466.8 328 77.1
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 1.6e-129 466.8 331 77.6
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 1.6e-129 466.8 331 77.0
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 3.6e-129 465.7 323 77.7
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 8.0e-129 464.5 328 76.5
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 4.0e-128 462.2 330 77.9
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 4.0e-128 462.2 337 75.1
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 4.9e-126 455.3 333 75.7
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 6.4e-126 454.9 328 75.6
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 1.9e-125 453.4 333 76.6
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 1.9e-125 453.4 336 75.0
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 2.4e-125 453.0 330 75.2
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 4.1e-125 452.2 395 75.9
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 4.1e-125 452.2 328 76.5
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 4.1e-125 452.2 330 77.6
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 4.1e-125 452.2 330 77.6
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 5.4e-125 451.8 337 73.6
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 7.0e-125 451.4 334 74.0
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 1.2e-124 450.7 337 73.9
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 2.7e-124 449.5 332 75.6
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 4.6e-124 448.7 334 73.7
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 7.8e-124 448.0 334 73.7
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 1.0e-123 447.6 355 70.1
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 1.3e-123 447.2 295 81.7
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 1.3e-123 447.2 295 81.7
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.3e-123 447.2 331 73.7
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 1.3e-123 447.2 331 75.2
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 2.3e-123 446.4 337 73.6
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 2.3e-123 446.4 332 74.7
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 3.0e-123 446.0 266 85.7
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.9e-123 445.7 336 73.2
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.9e-123 445.7 336 73.2
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 5.0e-123 445.3 329 74.2
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 5.0e-123 445.3 335 74.3
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 6.6e-123 444.9 331 74.3
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 1.1e-122 444.1 365 69.0
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 1.5e-122 443.7 338 72.8
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 1.5e-122 443.7 336 72.3
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 1.5e-122 443.7 276 83.0
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 7.3e-122 441.4 280 80.0
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 7.3e-122 441.4 336 71.7
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 9.5e-122 441.0 362 69.3
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 1.6e-121 440.3 333 73.0
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 1.6e-121 440.3 328 73.5
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 2.1e-121 439.9 343 72.3
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 3.6e-121 439.1 334 74.9
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.1e-120 437.6 281 82.6
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 1.8e-120 436.8 266 84.6
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 3.1e-120 436.0 304 77.6
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 6.8e-120 434.9 338 72.8
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 8.9e-120 434.5 341 71.8
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 1.5e-119 433.7 270 83.0
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 4.4e-119 432.2 326 73.3
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 9.8e-119 431.0 332 73.8
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 1.7e-118 430.3 329 72.6
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 2.9e-118 429.5 339 72.0
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 3.7e-118 429.1 331 71.9
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 8.3e-118 427.9 341 69.8
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 1.9e-117 426.8 329 70.5
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 2.4e-117 426.4 333 71.8
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 4.1e-117 425.6 332 71.1
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 7.1e-117 424.9 330 71.8
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 9.2e-117 424.5 331 70.4
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 2.1e-116 423.3 334 71.0
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 3.5e-116 422.5 337 69.7
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.5e-116 422.5 346 69.7
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 6.0e-116 421.8 334 70.4
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 1.3e-115 420.6 324 70.7
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 6.6e-115 418.3 409 60.9
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 1.1e-114 417.5 363 66.1
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.2e-113 414.1 330 68.8
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 1.2e-113 414.1 332 68.7
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.6e-113 413.7 331 68.6
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 6.2e-113 411.8 332 68.4
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 8.1e-113 411.4 333 67.9
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 2.3e-112 409.8 296 73.3
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 2.3e-112 409.8 330 71.8
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 7.6e-111 404.8 442 61.1
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 3.8e-110 402.5 331 67.1
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 4.9e-110 402.1 335 65.7
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 1.1e-109 401.0 335 65.7
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 4.1e-109 399.1 336 65.5
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 9.2e-109 397.9 328 67.1
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 6.0e-108 395.2 334 65.9
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 2.3e-107 393.3 331 64.7
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 5.6e-106 388.7 241 80.1
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 9.6e-106 387.9 308 70.8
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 2.1e-105 386.7 318 66.4
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 3.6e-105 386.0 247 79.4
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 8.9e-104 381.3 324 66.0
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.5e-103 380.6 308 70.5
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 9.9e-103 377.9 395 68.4
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 9.6e-98 361.3 333 61.0
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 1.2e-95 354.4 296 64.5
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 2.6e-95 353.2 268 66.0
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.7e-92 343.2 227 78.9
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 6.2e-89 332.0 270 64.4
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 3.1e-88 329.7 334 58.4
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 5.3e-88 328.9 271 62.7
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.0e-87 327.0 358 53.6
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.0e-87 327.0 358 53.6
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 3.8e-86 322.8 365 55.9
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 2.5e-82 310.1 276 60.9
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 1.8e-80 303.9 334 53.0
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 5.3e-80 302.4 266 59.4
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 2.5e-77 293.5 335 51.3
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 1.8e-75 287.3 249 64.3
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.5e-74 284.3 337 56.1
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.4e-72 276.9 218 70.2
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 2.5e-69 266.9 170 84.7
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 7.9e-68 261.9 283 57.6
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 2.2e-62 243.8 212 62.7
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 4.7e-52 209.5 228 53.1
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 8.2e-49 198.7 167 67.1
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 4.7e-44 183.0 115 75.7
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.0e-31 141.0 112 71.4
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 4.7e-28 129.8 75 80.0
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 6.1e-28 129.4 112 57.1
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 9.5e-21 105.5 103 66.0
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 3.6e-20 103.6 255 31.4
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 9.8e-18 95.5 62 67.7
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 2.2e-17 94.4 119 45.4
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 3.7e-17 93.6 239 29.3
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 3.9e-06 57.0 38 68.4


User provided reference genes

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