Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 8.3e-57 223.4 107 100.0
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 1.0e-38 163.3 86 88.4
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 4.7e-36 154.5 84 84.5
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 1.5e-34 149.4 81 86.4
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 2.4e-32 142.1 84 75.0
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 4.2e-32 141.4 84 78.6
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 7.1e-32 140.6 84 78.6
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 7.1e-32 140.6 84 76.2
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 1.2e-31 139.8 84 75.0
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 1.6e-31 139.4 84 75.0
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 2.1e-31 139.0 84 72.6
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 2.1e-31 139.0 88 69.3
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 2.7e-31 138.7 84 76.2
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 3.5e-31 138.3 86 72.1
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 6.0e-31 137.5 84 75.0
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 7.8e-31 137.1 84 73.8
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.0e-30 136.7 82 73.2
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 1.7e-30 136.0 79 77.2
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 1.7e-30 136.0 79 77.2
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 2.3e-30 135.6 82 76.8
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 2.3e-30 135.6 79 75.9
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 2.3e-30 135.6 79 75.9
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 2.3e-30 135.6 79 75.9
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 2.3e-30 135.6 82 75.6
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 3.0e-30 135.2 84 75.0
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 3.0e-30 135.2 79 77.2
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 3.9e-30 134.8 81 74.1
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 5.1e-30 134.4 86 70.9
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 5.1e-30 134.4 86 70.9
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 5.1e-30 134.4 84 71.4
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 5.1e-30 134.4 84 71.4
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 5.1e-30 134.4 82 74.4
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 6.6e-30 134.0 79 74.7
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 8.7e-30 133.7 84 73.8
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 1.5e-29 132.9 84 71.4
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 1.5e-29 132.9 84 69.0
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 1.9e-29 132.5 84 72.6
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 1.9e-29 132.5 88 68.2
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 1.9e-29 132.5 85 71.8
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 1.9e-29 132.5 80 75.0
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 1.9e-29 132.5 100 62.0
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 2.5e-29 132.1 84 72.6
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 2.5e-29 132.1 82 72.0
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 2.5e-29 132.1 79 75.9
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 3.3e-29 131.7 77 79.2
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 3.3e-29 131.7 84 73.8
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 3.3e-29 131.7 81 70.4
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 4.3e-29 131.3 84 73.8
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 4.3e-29 131.3 82 70.7
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 4.3e-29 131.3 82 75.6
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 4.3e-29 131.3 80 73.8
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 5.6e-29 131.0 84 70.2
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 5.6e-29 131.0 84 67.9
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 5.6e-29 131.0 80 75.0
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 5.6e-29 131.0 80 73.8
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 7.3e-29 130.6 91 64.8
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 7.3e-29 130.6 79 70.9
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 7.3e-29 130.6 100 62.0
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 9.6e-29 130.2 81 69.1
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 9.6e-29 130.2 83 71.1
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 9.6e-29 130.2 82 73.2
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 1.3e-28 129.8 80 71.2
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 1.3e-28 129.8 80 71.2
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.3e-28 129.8 80 71.2
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 1.6e-28 129.4 84 71.4
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 1.6e-28 129.4 81 72.8
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.6e-28 129.4 79 69.6
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 1.6e-28 129.4 80 73.8
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 2.1e-28 129.0 82 70.7
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 2.1e-28 129.0 84 69.0
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 2.1e-28 129.0 84 71.4
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.1e-28 129.0 84 69.0
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 2.1e-28 129.0 79 73.4
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 2.1e-28 129.0 82 72.0
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.1e-28 129.0 79 74.7
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.1e-28 129.0 79 74.7
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 2.8e-28 128.6 83 71.1
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 2.8e-28 128.6 81 70.4
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.8e-28 128.6 84 69.0
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.8e-28 128.6 84 69.0
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 3.6e-28 128.3 79 73.4
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 3.6e-28 128.3 79 73.4
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 3.6e-28 128.3 80 72.5
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 4.8e-28 127.9 84 67.9
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 4.8e-28 127.9 80 70.0
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 4.8e-28 127.9 82 69.5
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 6.2e-28 127.5 81 72.8
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 6.2e-28 127.5 84 70.2
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 6.2e-28 127.5 84 67.9
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 6.2e-28 127.5 81 69.1
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 6.2e-28 127.5 81 69.1
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 8.1e-28 127.1 81 71.6
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 8.1e-28 127.1 79 73.4
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 1.1e-27 126.7 84 70.2
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.1e-27 126.7 80 70.0
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 1.1e-27 126.7 79 72.2
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 1.4e-27 126.3 84 69.0
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 1.4e-27 126.3 84 69.0
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 1.4e-27 126.3 79 72.2
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 2.4e-27 125.6 84 70.2
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 2.4e-27 125.6 81 70.4
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 4.0e-27 124.8 79 70.9
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 5.3e-27 124.4 84 66.7
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 5.3e-27 124.4 81 69.1
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 5.3e-27 124.4 79 72.2
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 6.9e-27 124.0 81 69.1
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 6.9e-27 124.0 82 72.0
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 9.0e-27 123.6 81 67.9
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 1.2e-26 123.2 81 70.4
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 1.2e-26 123.2 81 71.6
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 1.5e-26 122.9 81 70.4
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 1.5e-26 122.9 81 67.9
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 2.0e-26 122.5 79 69.6
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 2.0e-26 122.5 82 68.3
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 2.0e-26 122.5 80 68.8
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 2.6e-26 122.1 79 69.6
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 2.6e-26 122.1 84 65.5
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 4.5e-26 121.3 77 70.1
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 4.5e-26 121.3 77 70.1
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 5.8e-26 120.9 82 65.9
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 7.6e-26 120.6 82 64.6
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 7.6e-26 120.6 79 68.4
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 7.6e-26 120.6 81 67.9
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 1.3e-25 119.8 84 64.3
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 1.3e-25 119.8 82 67.1
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.3e-25 119.8 84 66.7
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 1.7e-25 119.4 79 68.4
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 1.7e-25 119.4 67 79.1
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 1.7e-25 119.4 81 65.4
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 3.8e-25 118.2 84 63.1
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 4.9e-25 117.9 83 66.3
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 6.4e-25 117.5 79 67.1
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 6.4e-25 117.5 79 67.1
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 6.4e-25 117.5 80 63.8
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 1.1e-24 116.7 79 62.0
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 1.1e-24 116.7 83 65.1
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 1.4e-24 116.3 79 64.6
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 1.9e-24 115.9 69 78.3
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 1.9e-24 115.9 79 65.8
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 9.3e-24 113.6 83 62.7
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 9.3e-24 113.6 79 67.1
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 9.3e-24 113.6 79 63.3
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.2e-23 113.2 84 60.7
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 3.5e-23 111.7 70 72.9
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 1.3e-22 109.8 79 58.2
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 1.8e-22 109.4 79 63.3
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 2.3e-22 109.0 87 62.1
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 3.0e-22 108.6 79 60.8
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 1.1e-21 106.7 65 73.8
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 3.3e-21 105.1 79 58.2
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 5.6e-21 104.4 72 70.8
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 2.1e-20 102.4 79 55.7
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 4.8e-20 101.3 67 65.7
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 8.1e-20 100.5 79 62.0
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.4e-19 99.8 74 58.1
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 1.8e-19 99.4 69 63.8
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 3.1e-19 98.6 72 62.5
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 4.9e-17 91.3 74 55.4
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 6.4e-17 90.9 73 58.9
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 1.1e-16 90.1 72 61.1
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.9e-16 89.4 62 62.9
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 4.6e-15 84.7 64 64.1
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 3.9e-14 81.6 69 53.6
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 3.9e-14 81.6 61 63.9
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 3.3e-13 78.6 97 42.3
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 9.6e-13 77.0 76 46.1
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.3e-12 76.6 51 72.5
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 1.3e-12 76.6 51 72.5
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 1.5e-10 69.7 39 76.9
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 1.3e-09 66.6 71 40.8
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 4.2e-08 61.6 100 34.0
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.2e-07 60.1 69 39.1
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 1.6e-07 59.7 69 39.1


User provided reference genes

Program Settings