Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 0.0e+00 1077.0 550 100.0
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 2.8e-281 971.5 550 91.6
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 4.5e-263 911.0 600 79.5
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 4.2e-245 851.3 597 74.4
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 1.6e-204 716.5 589 63.0
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 8.3e-201 704.1 590 61.0
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 4.5e-199 698.4 591 61.4
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 5.9e-199 698.0 586 62.3
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 1.3e-198 696.8 590 61.2
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 6.5e-198 694.5 594 62.0
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 5.5e-197 691.4 595 60.7
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 2.1e-196 689.5 587 60.8
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 2.1e-196 689.5 595 60.3
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 1.0e-195 687.2 585 60.3
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 1.2e-194 683.7 590 60.8
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 5.7e-194 681.4 592 60.6
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 5.7e-194 681.4 576 61.8
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 7.5e-194 681.0 572 62.9
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 2.8e-193 679.1 594 59.1
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 1.4e-192 676.8 583 61.6
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 1.4e-192 676.8 584 61.5
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 1.4e-192 676.8 571 62.5
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 1.4e-192 676.8 582 61.0
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 5.4e-192 674.9 571 61.8
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 7.0e-192 674.5 587 59.1
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 9.2e-192 674.1 593 59.4
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 1.6e-191 673.3 583 61.1
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 2.0e-191 672.9 587 60.0
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 2.3e-190 669.5 587 59.6
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 8.6e-190 667.5 573 62.0
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 1.5e-189 666.8 581 60.2
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 1.9e-189 666.4 578 60.4
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 7.3e-189 664.5 566 61.5
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 4.7e-188 661.8 586 58.2
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 2.3e-187 659.4 591 59.1
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 6.8e-187 657.9 615 58.0
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.6e-186 656.0 588 59.5
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 2.6e-186 656.0 586 58.2
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 4.4e-186 655.2 583 60.2
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 1.7e-185 653.3 578 60.2
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 1.7e-185 653.3 597 59.6
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 8.3e-185 651.0 593 58.2
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 8.3e-185 651.0 586 57.5
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 2.4e-184 649.4 589 58.9
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 4.1e-184 648.7 573 61.4
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 7.0e-184 647.9 578 58.3
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 7.0e-184 647.9 584 58.2
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 2.7e-183 646.0 608 57.2
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 3.9e-182 642.1 588 57.7
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 1.1e-181 640.6 586 57.8
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 4.3e-181 638.6 590 57.6
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 5.6e-181 638.3 595 57.6
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 1.6e-180 636.7 587 57.8
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 1.8e-179 633.3 581 58.3
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 2.3e-179 632.9 581 59.6
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 3.1e-179 632.5 596 56.7
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 8.9e-179 630.9 588 57.8
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 1.2e-178 630.6 588 56.8
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 2.0e-178 629.8 608 55.1
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 2.0e-178 629.8 591 56.3
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 9.8e-178 627.5 585 56.8
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 2.9e-177 625.9 591 57.0
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 2.9e-177 625.9 589 56.5
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 4.9e-177 625.2 592 56.1
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 4.9e-177 625.2 588 56.6
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 8.3e-177 624.4 598 57.0
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 5.4e-176 621.7 578 56.2
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 5.4e-176 621.7 578 56.4
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 9.2e-176 620.9 579 56.8
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 9.2e-176 620.9 598 56.7
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 8.6e-174 614.4 586 55.1
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 1.5e-173 613.6 588 55.3
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 9.5e-173 610.9 590 55.6
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 6.2e-172 608.2 591 55.2
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 2.3e-171 606.3 451 67.8
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 8.9e-171 604.4 592 54.4
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 8.9e-171 604.4 592 55.2
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 1.2e-170 604.0 591 54.8
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 3.4e-170 602.4 525 60.6
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 4.4e-170 602.1 523 60.6
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 9.9e-170 600.9 601 54.4
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.6e-167 593.6 567 55.6
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 5.1e-166 588.6 598 52.8
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 1.1e-165 587.4 598 52.8
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 5.6e-165 585.1 568 56.0
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 4.7e-164 582.0 574 54.9
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 1.1e-163 580.9 540 56.9
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 4.0e-163 578.9 442 67.6
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 1.2e-162 577.4 550 54.4
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 3.4e-162 575.9 613 52.5
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 7.6e-162 574.7 523 58.5
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 1.7e-161 573.5 520 58.7
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 1.1e-160 570.9 585 53.3
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 1.3e-158 563.9 564 53.4
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 6.6e-158 561.6 551 53.9
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 3.9e-150 535.8 525 55.2
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 3.8e-145 519.2 549 51.4
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 2.2e-113 413.7 606 41.3
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 4.5e-98 362.8 280 63.6
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 1.0e-81 308.5 426 40.8
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 1.0e-81 308.5 426 40.8
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 2.1e-71 274.2 453 37.1
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 2.2e-52 211.1 546 29.7
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 3.8e-36 157.1 281 38.8
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 6.6e-33 146.4 140 55.0
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 5.8e-29 133.3 230 39.6
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 3.7e-15 87.4 223 31.4
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 6.2e-15 86.7 310 28.1
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.4e-11 75.5 99 45.5
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 1.9e-11 75.1 133 37.6
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 1.8e-09 68.6 400 24.0
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 6.7e-09 66.6 106 33.0
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 3.3e-08 64.3 65 49.2
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 5.7e-08 63.5 77 42.9
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 8.2e-07 59.7 50 50.0


User provided reference genes

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