Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 2.1e-123 445.7 218 100.0
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 4.1e-111 404.8 217 91.7
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 4.9e-96 354.8 219 79.0
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 1.0e-93 347.1 217 76.5
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 5.6e-84 314.7 217 70.0
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 2.7e-70 269.2 217 60.4
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 3.5e-70 268.9 217 59.9
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 3.0e-69 265.8 217 59.0
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 3.9e-69 265.4 217 59.9
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 3.9e-69 265.4 174 69.0
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 6.6e-69 264.6 218 59.6
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 1.1e-68 263.8 215 59.5
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 1.9e-68 263.1 217 58.5
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 5.6e-68 261.5 217 59.4
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 7.3e-68 261.2 160 72.5
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.3e-67 260.4 218 58.7
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.6e-67 260.0 218 59.2
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 4.8e-67 258.5 217 59.4
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 6.2e-67 258.1 174 66.1
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 1.1e-66 257.3 158 72.2
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 1.1e-66 257.3 158 72.2
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 1.8e-66 256.5 158 73.4
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 3.1e-66 255.8 217 59.0
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 5.3e-66 255.0 220 60.0
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 6.9e-66 254.6 218 56.9
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 9.0e-66 254.2 219 58.4
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 9.0e-66 254.2 158 71.5
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 1.5e-65 253.4 217 57.6
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.5e-65 253.4 174 66.1
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 5.8e-65 251.5 158 72.8
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 1.3e-64 250.4 161 66.5
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 1.7e-64 250.0 217 55.8
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 2.9e-64 249.2 225 58.2
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 4.9e-64 248.4 217 58.5
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 6.4e-64 248.1 222 56.3
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 8.4e-64 247.7 158 69.0
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 1.9e-63 246.5 161 70.2
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 3.2e-63 245.7 161 71.4
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 4.2e-63 245.4 217 53.9
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 4.2e-63 245.4 217 56.7
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 5.4e-63 245.0 162 69.8
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 5.4e-63 245.0 163 68.7
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 7.1e-63 244.6 222 55.4
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 9.3e-63 244.2 219 57.1
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 1.2e-62 243.8 214 57.0
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 1.6e-62 243.4 189 61.9
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 3.5e-62 242.3 204 59.8
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 3.5e-62 242.3 158 69.0
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 4.6e-62 241.9 217 54.8
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 4.6e-62 241.9 161 68.9
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 6.0e-62 241.5 204 59.3
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 6.0e-62 241.5 218 56.4
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 7.9e-62 241.1 217 55.3
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 1.0e-61 240.7 158 70.3
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.0e-61 240.7 218 56.4
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.0e-61 240.7 158 70.9
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 1.3e-61 240.4 156 70.5
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 1.3e-61 240.4 217 57.1
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 1.3e-61 240.4 156 70.5
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 1.3e-61 240.4 223 55.2
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.8e-61 240.0 158 70.3
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 3.9e-61 238.8 158 67.1
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 3.9e-61 238.8 217 55.8
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 6.7e-61 238.0 218 55.5
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 8.7e-61 237.7 217 56.7
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 8.7e-61 237.7 217 54.8
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 8.7e-61 237.7 162 65.4
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 1.5e-60 236.9 217 54.8
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 1.5e-60 236.9 217 54.4
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 1.9e-60 236.5 217 56.2
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 2.5e-60 236.1 196 61.2
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 3.3e-60 235.7 217 53.9
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 4.3e-60 235.3 222 55.9
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 7.4e-60 234.6 222 55.9
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 7.4e-60 234.6 222 55.9
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 2.8e-59 232.6 223 55.2
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 6.2e-59 231.5 217 53.5
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 8.1e-59 231.1 217 54.4
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 1.1e-58 230.7 217 52.5
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 1.8e-58 229.9 223 54.3
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 1.8e-58 229.9 217 53.9
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 1.2e-57 227.3 216 50.9
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 5.8e-57 224.9 202 54.0
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 5.8e-57 224.9 204 55.4
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 4.9e-56 221.9 179 55.9
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 1.1e-55 220.7 220 52.3
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 3.0e-53 212.6 223 49.8
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 6.7e-53 211.5 148 66.2
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 9.6e-52 207.6 200 55.5
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 9.0e-50 201.1 145 62.8
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 4.2e-47 192.2 158 57.0
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 6.7e-45 184.9 224 45.1
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 2.0e-41 173.3 151 55.0
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 1.3e-40 170.6 134 54.5
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 9.3e-39 164.5 115 67.0
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 7.9e-38 161.4 143 48.3
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 1.8e-37 160.2 152 51.3
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 9.7e-36 154.5 113 63.7
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 2.9e-32 142.9 137 48.2
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 6.9e-26 121.7 82 67.1
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 1.2e-25 120.9 145 39.3
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 1.7e-24 117.1 81 61.7
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 2.5e-23 113.2 157 42.7
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 4.4e-20 102.4 52 82.7
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 7.4e-20 101.7 155 38.1
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.7e-14 83.2 54 74.1
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 4.8e-11 72.4 44 72.7
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 2.7e-06 56.6 71 40.8


User provided reference genes

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