Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62022348 Chenopodium quinoa HOM05D005820 ORTHO05D007116 7.6e-97 357.1 169 100.0
AUR62042764 Chenopodium quinoa HOM05D005820 ORTHO05D007116 1.5e-44 183.3 97 93.8
AUR62033087 Chenopodium quinoa HOM05D005820 ORTHO05D007116 5.7e-44 181.4 97 92.8
EL10Ac4g08387 Beta vulgaris HOM05D005820 ORTHO05D007116 1.7e-40 169.9 97 85.6
EL10Ac2g03131 Beta vulgaris HOM05D005820 ORTHO05D007116 3.8e-40 168.7 97 85.6
Thecc.05G222900 Theobroma cacao HOM05D005820 ORTHO05D007116 8.6e-32 141.0 97 71.1
Gohir.A02G125300 Gossypium hirsutum HOM05D005820 ORTHO05D007116 1.6e-30 136.7 97 69.1
Gorai.003G057900 Gossypium raimondii HOM05D005820 ORTHO05D007116 1.6e-30 136.7 97 69.1
Cfa016076 Carpinus fangiana HOM05D005820 ORTHO05D007116 2.8e-30 136.0 98 71.4
COL.COLO4_15131 Corchorus olitorius HOM05D005820 ORTHO05D007116 2.8e-30 136.0 97 70.1
Haze_00369 Corylus avellana HOM05D005820 ORTHO05D007116 2.8e-30 136.0 98 71.4
Duzib106G1003 Durio zibethinus HOM05D005820 ORTHO05D007116 3.6e-30 135.6 97 68.0
TWI53G1480 Tripterygium wilfordii HOM05D005820 ORTHO05D007116 3.6e-30 135.6 98 71.4
Sabra13G0066100 Salix brachista HOM05D005820 ORTHO05D007116 4.7e-30 135.2 98 69.4
COL.COLO4_22345 Corchorus olitorius HOM05D005820 ORTHO05D007116 6.1e-30 134.8 98 68.4
Lj3A884T58 Lonicera japonica HOM05D005820 ORTHO05D007116 6.1e-30 134.8 103 66.0
Atru.chr12.1871 Acer truncatum HOM05D005820 ORTHO05D007116 1.4e-29 133.7 98 69.4
CiPaw.05G212600 Carya illinoinensis HOM05D005820 ORTHO05D007116 1.4e-29 133.7 98 70.4
Gohir.D03G055100 Gossypium hirsutum HOM05D005820 ORTHO05D007116 1.4e-29 133.7 97 67.0
Potri.013G077200 Populus trichocarpa HOM05D005820 ORTHO05D007116 3.1e-29 132.5 98 71.4
Ciclev10033588m.g Citrus clementina HOM05D005820 ORTHO05D007116 4.0e-29 132.1 97 69.1
MSTRG.19155 Avicennia marina HOM05D005820 ORTHO05D007116 6.8e-29 131.3 99 64.6
CSS0036845 Camellia sinensis var. sinensis HOM05D005820 ORTHO05D007116 1.5e-28 130.2 98 68.4
Atru.chr13.1435 Acer truncatum HOM05D005820 ORTHO05D007116 2.6e-28 129.4 98 67.3
PGR042G2204 Punica granatum HOM05D005820 ORTHO05D007116 2.6e-28 129.4 97 62.9
Manes.08G160700 Manihot esculenta HOM05D005820 ORTHO05D007116 4.4e-28 128.6 98 68.4
Prupe.2G329300 Prunus persica HOM05D005820 ORTHO05D007116 5.8e-28 128.3 98 69.4
RcHm_v2.0_Chr1g0384611 Rosa chinensis HOM05D005820 ORTHO05D007116 5.8e-28 128.3 98 68.4
TAR633G0012 Trochodendron aralioides HOM05D005820 ORTHO05D007116 1.3e-27 127.1 99 67.7
Actinidia08766 Actinidia chinensis HOM05D005820 ORTHO05D007116 1.7e-27 126.7 98 67.3
CANSAT54G2180 Cannabis sativa HOM05D005820 ORTHO05D007116 2.2e-27 126.3 98 69.4
Cpa.g.sc43.140 Carica papaya HOM05D005820 ORTHO05D007116 2.9e-27 125.9 103 63.1
Nn3g21157 Nelumbo nucifera HOM05D005820 ORTHO05D007116 2.9e-27 125.9 99 65.7
Aa31LG11G12940 Aethionema arabicum HOM05D005820 ORTHO05D007116 4.9e-27 125.2 99 63.6
Rhsim03G0224500 Rhododendron simsii HOM05D005820 ORTHO05D007116 4.9e-27 125.2 98 64.3
vmacro06371 Vaccinium macrocarpon HOM05D005820 ORTHO05D007116 4.9e-27 125.2 98 65.3
QL09p020654 Quercus lobata HOM05D005820 ORTHO05D007116 1.4e-26 123.6 98 68.4
SGA_v2.0_scaffold75G24867 Striga asiatica HOM05D005820 ORTHO05D007116 1.4e-26 123.6 98 63.3
THA.LOC104821161 Tarenaya hassleriana HOM05D005820 ORTHO05D007116 1.4e-26 123.6 97 62.9
Sc13g0011020 Simmondsia chinensis HOM05D005820 ORTHO05D007116 1.9e-26 123.2 98 63.3
TAR365G1018 Trochodendron aralioides HOM05D005820 ORTHO05D007116 1.9e-26 123.2 107 59.8
DCAR_020431 Daucus carota HOM05D005820 ORTHO05D007116 2.4e-26 122.9 98 65.3
Migut.J00550 Erythranthe guttata HOM05D005820 ORTHO05D007116 3.2e-26 122.5 99 62.6
FAN10G1332 Fragaria x ananassa HOM05D005820 ORTHO05D007116 3.2e-26 122.5 98 66.3
TAR365G1123 Trochodendron aralioides HOM05D005820 ORTHO05D007116 3.2e-26 122.5 99 63.6
Thhalv10012783m.g Eutrema salsugineum HOM05D005820 ORTHO05D007116 5.4e-26 121.7 98 62.2
Lj3g0016493 Lotus japonicus HOM05D005820 ORTHO05D007116 5.4e-26 121.7 98 65.3
SHI15005 Sapria himalayana HOM05D005820 ORTHO05D007116 7.0e-26 121.3 99 62.6
FvH4_7g34260 Fragaria vesca HOM05D005820 ORTHO05D007116 9.2e-26 120.9 98 65.3
Sp6g27470 Schrenkiella parvula HOM05D005820 ORTHO05D007116 1.2e-25 120.6 98 62.2
ECA233G1554 Erigeron canadensis HOM05D005820 ORTHO05D007116 1.6e-25 120.2 98 64.3
FAN01G2368 Fragaria x ananassa HOM05D005820 ORTHO05D007116 1.6e-25 120.2 98 65.3
MELO3C005455.2 Cucumis melo HOM05D005820 ORTHO05D007116 2.0e-25 119.8 98 64.3
Eucgr.A02992 Eucalyptus grandis HOM05D005820 ORTHO05D007116 2.7e-25 119.4 98 59.2
Hma1.2p1_0419F.1_g149500 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 2.7e-25 119.4 98 64.3
Hma1.2p1_0419F.1_g149510 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 2.7e-25 119.4 98 64.3
AL6G27690 Arabidopsis lyrata HOM05D005820 ORTHO05D007116 3.5e-25 119.0 98 60.2
ClCG01G004810 Citrullus lanatus HOM05D005820 ORTHO05D007116 3.5e-25 119.0 98 63.3
FAN03G2216 Fragaria x ananassa HOM05D005820 ORTHO05D007116 3.5e-25 119.0 98 65.3
CsaV3_5G005010 Cucumis sativus L. HOM05D005820 ORTHO05D007116 4.6e-25 118.6 98 63.3
BcaB08g36827 Brassica carinata HOM05D005820 ORTHO05D007116 6.0e-25 118.2 101 62.4
ECA232G1869 Erigeron canadensis HOM05D005820 ORTHO05D007116 6.0e-25 118.2 98 63.3
Glyma.12G014600 Glycine max HOM05D005820 ORTHO05D007116 6.0e-25 118.2 98 60.2
Lalb_Chr01g0000781 Lupinus albus HOM05D005820 ORTHO05D007116 6.0e-25 118.2 98 61.2
AT5G16690 Arabidopsis thaliana HOM05D005820 ORTHO05D007116 7.8e-25 117.9 98 60.2
arahy.Tifrunner.gnm1.ann1.9S7XN2 Arachis hypogaea HOM05D005820 ORTHO05D007116 1.0e-24 117.5 98 61.2
HanXRQChr15g0492741 Helianthus annuus HOM05D005820 ORTHO05D007116 1.7e-24 116.7 98 62.2
CARHR196510 Cardamine hirsuta HOM05D005820 ORTHO05D007116 3.9e-24 115.5 98 58.2
SalBow3G3950 Salvia bowleyana HOM05D005820 ORTHO05D007116 5.0e-24 115.2 104 53.8
Sed0005542 Sechium edule HOM05D005820 ORTHO05D007116 6.6e-24 114.8 98 59.2
Aqoxy2G01900 Aquilegia oxysepala HOM05D005820 ORTHO05D007116 1.5e-23 113.6 98 61.2
BolC9t58877H Brassica oleracea HOM05D005820 ORTHO05D007116 1.5e-23 113.6 99 59.6
C09p60450 Brassica napus HOM05D005820 ORTHO05D007116 1.9e-23 113.2 98 58.2
Ca_03104_v3 Cicer arietinum L. HOM05D005820 ORTHO05D007116 1.9e-23 113.2 98 61.2
Medtr5g082610 Medicago truncatula HOM05D005820 ORTHO05D007116 1.9e-23 113.2 98 59.2
Sopen12g007200 Solanum pennellii HOM05D005820 ORTHO05D007116 1.9e-23 113.2 98 60.2
TPR.G19809 Trifolium pratense HOM05D005820 ORTHO05D007116 1.9e-23 113.2 98 59.2
A10p22530 Brassica napus HOM05D005820 ORTHO05D007116 2.5e-23 112.8 98 58.2
BraA10t44315Z Brassica rapa HOM05D005820 ORTHO05D007116 3.3e-23 112.5 98 58.2
Carub.0006s1489 Capsella rubella HOM05D005820 ORTHO05D007116 4.3e-23 112.1 98 57.1
Solyc12g013880.2 Solanum lycopersicum HOM05D005820 ORTHO05D007116 5.6e-23 111.7 98 59.2
Peaxi162Scf00046g02624 Petunia axillaris HOM05D005820 ORTHO05D007116 1.2e-22 110.5 98 59.2
Nitab4.5_0010710g0030 Nicotiana tabacum HOM05D005820 ORTHO05D007116 1.6e-22 110.2 98 59.2
unitig_749.g14271 Utricularia gibba HOM05D005820 ORTHO05D007116 1.6e-22 110.2 99 51.5
Cc10_g10830 Coffea canephora HOM05D005820 ORTHO05D007116 2.1e-22 109.8 98 59.2
Lsat_1_v5_gn_9_46201 Lactuca sativa HOM05D005820 ORTHO05D007116 2.8e-22 109.4 98 58.2
Phvul.011G017500 Phaseolus vulgaris HOM05D005820 ORTHO05D007116 2.8e-22 109.4 98 58.2
Psat5g135040 Pisum sativum HOM05D005820 ORTHO05D007116 2.8e-22 109.4 98 57.1
CAN.G103.20 Capsicum annuum HOM05D005820 ORTHO05D007116 3.6e-22 109.0 98 58.2
MD07G1032700 Malus domestica HOM05D005820 ORTHO05D007116 3.6e-22 109.0 98 61.2
PSO210G4891 Papaver somniferum HOM05D005820 ORTHO05D007116 4.7e-22 108.6 99 56.6
Nitab4.5_0012358g0010 Nicotiana tabacum HOM05D005820 ORTHO05D007116 1.8e-21 106.7 98 57.1
PGSC0003DMG402015362 Solanum tuberosum HOM05D005820 ORTHO05D007116 3.1e-21 105.9 98 58.2
PSO339G0775 Papaver somniferum HOM05D005820 ORTHO05D007116 5.2e-21 105.1 99 55.6
VMungo1127G1342 Vigna mungo HOM05D005820 ORTHO05D007116 5.2e-21 105.1 105 55.2
PSO384G2364 Papaver somniferum HOM05D005820 ORTHO05D007116 1.2e-20 104.0 99 54.5
PSO170G6050 Papaver somniferum HOM05D005820 ORTHO05D007116 2.0e-20 103.2 96 56.2
Zm00001eb031810 Zea mays HOM05D005820 ORTHO05D007116 1.7e-19 100.1 140 39.3
ATR0829G080 Amborella trichopoda HOM05D005820 ORTHO05D007116 3.7e-19 99.0 98 50.0
MD01G1239300 Malus domestica HOM05D005820 ORTHO05D007116 7.8e-17 91.3 66 68.2
HPP92_000954 Vanilla planifolia HOM05D005820 ORTHO05D007116 7.8e-17 91.3 98 45.9
CDE02G0417 Ceratophyllum demersum HOM05D005820 ORTHO05D007116 5.1e-16 88.6 98 49.0
Os10g0402200 Oryza sativa ssp. japonica HOM05D005820 ORTHO05D007116 1.1e-15 87.4 97 42.3
Pp3c16_7630 Physcomitrium patens HOM05D005820 ORTHO05D007116 3.1e-13 79.3 102 42.2
Mapoly0140s0032 Marchantia polymorpha HOM05D005820 ORTHO05D007116 4.0e-13 79.0 102 37.3
AagrBONN_evm.TU.Sc2ySwM_368.2608 Anthoceros agrestis HOM05D005820 ORTHO05D007116 4.9e-11 72.0 102 37.3
CBR_g52284 Chara braunii HOM05D005820 ORTHO05D007116 6.4e-11 71.6 103 36.9
arahy.Tifrunner.gnm1.ann1.9KL91U Arachis hypogaea HOM05D005820 ORTHO05D007116 8.3e-11 71.2 49 69.4
arahy.Tifrunner.gnm1.ann1.CH4JFK Arachis hypogaea HOM05D005820 ORTHO05D007116 8.3e-11 71.2 49 69.4
SMO203G0218 Selaginella moellendorffii HOM05D005820 ORTHO05D007116 1.6e-06 57.0 103 32.0


User provided reference genes

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