Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021789 Chenopodium quinoa HOM05D006217 ORTHO05D008480 5.9e-28 129.8 142 100.0
AUR62021792 Chenopodium quinoa HOM05D006217 ORTHO05D008480 5.9e-28 129.8 142 100.0
Ah.11g046350 Amaranthus hybridus HOM05D006217 ORTHO05D008480 2.2e-27 127.9 142 97.9
AUR62008306 Chenopodium quinoa HOM05D006217 ORTHO05D008480 2.2e-27 127.9 142 99.3
EL10Ac5g10869 Beta vulgaris HOM05D006217 ORTHO05D008480 4.7e-25 120.2 142 95.8
PGR044G0185 Punica granatum HOM05D006217 ORTHO05D008480 1.5e-23 115.2 142 93.0
Hund02699 Selenicereus undatus HOM05D006217 ORTHO05D008480 3.7e-22 110.5 142 90.8
THA.LOC104809230 Tarenaya hassleriana HOM05D006217 ORTHO05D008480 8.2e-22 109.4 142 90.1
PSO832G0921 Papaver somniferum HOM05D006217 ORTHO05D008480 1.1e-21 109.0 141 85.8
Sc12g0005700 Simmondsia chinensis HOM05D006217 ORTHO05D008480 1.4e-21 108.6 142 91.5
arahy.Tifrunner.gnm1.ann1.C8Z94U Arachis hypogaea HOM05D006217 ORTHO05D008480 2.4e-21 107.8 142 90.1
arahy.Tifrunner.gnm1.ann1.KCM1HB Arachis hypogaea HOM05D006217 ORTHO05D008480 2.4e-21 107.8 142 90.1
Nn4g22966 Nelumbo nucifera HOM05D006217 ORTHO05D008480 2.4e-21 107.8 142 87.3
Lj9C455T7 Lonicera japonica HOM05D006217 ORTHO05D008480 3.1e-21 107.5 142 88.7
TAR622G0668 Trochodendron aralioides HOM05D006217 ORTHO05D008480 3.1e-21 107.5 142 90.1
Manes.06G099200 Manihot esculenta HOM05D006217 ORTHO05D008480 4.1e-21 107.1 142 90.8
Cpa.g.sc35.13 Carica papaya HOM05D006217 ORTHO05D008480 7.0e-21 106.3 142 89.4
Hma1.2p1_0572F.1_g181080 Hydrangea macrophylla HOM05D006217 ORTHO05D008480 7.0e-21 106.3 142 85.2
Hma1.2p1_0572F.1_g181090 Hydrangea macrophylla HOM05D006217 ORTHO05D008480 7.0e-21 106.3 142 85.2
Aqoxy3G03170 Aquilegia oxysepala HOM05D006217 ORTHO05D008480 2.0e-20 104.8 142 86.6
Ca_21873_v3 Cicer arietinum L. HOM05D006217 ORTHO05D008480 2.0e-20 104.8 142 89.4
CSS0020542 Camellia sinensis var. sinensis HOM05D006217 ORTHO05D008480 2.6e-20 104.4 142 87.3
CiPaw.11G034100 Carya illinoinensis HOM05D006217 ORTHO05D008480 2.6e-20 104.4 142 86.6
PSO591G0410 Papaver somniferum HOM05D006217 ORTHO05D008480 2.6e-20 104.4 141 83.7
Haze_07417 Corylus avellana HOM05D006217 ORTHO05D008480 4.5e-20 103.6 142 90.8
Lj4g0005624 Lotus japonicus HOM05D006217 ORTHO05D008480 4.5e-20 103.6 142 88.7
Lalb_Chr12g0201281 Lupinus albus HOM05D006217 ORTHO05D008480 5.9e-20 103.2 142 88.7
Rhsim08G0164000 Rhododendron simsii HOM05D006217 ORTHO05D008480 5.9e-20 103.2 142 85.2
Dinv13121 Davidia involucrata HOM05D006217 ORTHO05D008480 7.7e-20 102.8 142 86.6
Medtr4g107210 Medicago truncatula HOM05D006217 ORTHO05D008480 7.7e-20 102.8 142 89.4
Prupe.5G181900 Prunus persica HOM05D006217 ORTHO05D008480 7.7e-20 102.8 142 88.7
TPR.G38418 Trifolium pratense HOM05D006217 ORTHO05D008480 7.7e-20 102.8 142 90.1
AL2G34730 Arabidopsis lyrata HOM05D006217 ORTHO05D008480 1.0e-19 102.4 142 90.1
AT1G74850 Arabidopsis thaliana HOM05D006217 ORTHO05D008480 1.0e-19 102.4 142 90.1
CSS0050348 Camellia sinensis var. sinensis HOM05D006217 ORTHO05D008480 1.0e-19 102.4 142 85.2
Gohir.A12G276600 Gossypium hirsutum HOM05D006217 ORTHO05D008480 1.0e-19 102.4 141 91.5
Gorai.008G298300 Gossypium raimondii HOM05D006217 ORTHO05D008480 1.0e-19 102.4 141 91.5
MD14G1189200 Malus domestica HOM05D006217 ORTHO05D008480 1.0e-19 102.4 142 88.7
Psat4g055880 Pisum sativum HOM05D006217 ORTHO05D008480 1.0e-19 102.4 142 88.7
Carub.0002s2163 Capsella rubella HOM05D006217 ORTHO05D008480 1.3e-19 102.1 142 90.1
Duzib205G0682 Durio zibethinus HOM05D006217 ORTHO05D008480 1.3e-19 102.1 142 89.4
Thhalv10018112m.g Eutrema salsugineum HOM05D006217 ORTHO05D008480 1.3e-19 102.1 142 89.4
DCAR_016511 Daucus carota HOM05D006217 ORTHO05D008480 1.7e-19 101.7 142 87.3
Potri.015G069100 Populus trichocarpa HOM05D006217 ORTHO05D008480 1.7e-19 101.7 142 88.7
Thecc.03G001400 Theobroma cacao HOM05D006217 ORTHO05D008480 1.7e-19 101.7 142 88.7
BcaC08g46912 Brassica carinata HOM05D006217 ORTHO05D008480 2.2e-19 101.3 142 89.4
A07p40490 Brassica napus HOM05D006217 ORTHO05D008480 2.2e-19 101.3 142 89.4
C06p48860 Brassica napus HOM05D006217 ORTHO05D008480 2.2e-19 101.3 142 89.4
BolC6t39922H Brassica oleracea HOM05D006217 ORTHO05D008480 2.2e-19 101.3 142 89.4
BraA07t31592Z Brassica rapa HOM05D006217 ORTHO05D008480 2.2e-19 101.3 142 89.4
Gohir.D12G277600 Gossypium hirsutum HOM05D006217 ORTHO05D008480 2.2e-19 101.3 141 90.8
Sp5g29980 Schrenkiella parvula HOM05D006217 ORTHO05D008480 2.2e-19 101.3 142 88.7
BcaC08g46950 Brassica carinata HOM05D006217 ORTHO05D008480 2.9e-19 100.9 142 89.4
Eucgr.K02896 Eucalyptus grandis HOM05D006217 ORTHO05D008480 2.9e-19 100.9 142 88.7
vmacro19344 Vaccinium macrocarpon HOM05D006217 ORTHO05D008480 2.9e-19 100.9 142 85.2
Aa31LG4G5060 Aethionema arabicum HOM05D006217 ORTHO05D008480 3.8e-19 100.5 142 88.7
FvH4_5g16180 Fragaria vesca HOM05D006217 ORTHO05D008480 3.8e-19 100.5 142 88.0
FAN08G1390 Fragaria x ananassa HOM05D006217 ORTHO05D008480 3.8e-19 100.5 142 88.0
FAN18G2370 Fragaria x ananassa HOM05D006217 ORTHO05D008480 3.8e-19 100.5 142 88.0
CSS0026115 Camellia sinensis var. sinensis HOM05D006217 ORTHO05D008480 5.0e-19 100.1 141 84.4
CARHR068170 Cardamine hirsuta HOM05D006217 ORTHO05D008480 5.0e-19 100.1 142 87.3
COL.COLO4_26823 Corchorus olitorius HOM05D006217 ORTHO05D008480 6.5e-19 99.8 142 89.4
MELO3C002229.2 Cucumis melo HOM05D006217 ORTHO05D008480 6.5e-19 99.8 142 87.3
CsaV3_1G008120 Cucumis sativus L. HOM05D006217 ORTHO05D008480 6.5e-19 99.8 142 87.3
FAN13G2523 Fragaria x ananassa HOM05D006217 ORTHO05D008480 6.5e-19 99.8 142 88.0
BcaC08g46908 Brassica carinata HOM05D006217 ORTHO05D008480 8.5e-19 99.4 142 52.1
CAN.G853.39 Capsicum annuum HOM05D006217 ORTHO05D008480 8.5e-19 99.4 142 87.3
Sed0019903 Sechium edule HOM05D006217 ORTHO05D008480 8.5e-19 99.4 142 86.6
Glyma.17G094300 Glycine max HOM05D006217 ORTHO05D008480 1.1e-18 99.0 142 87.3
ClCG01G014190 Citrullus lanatus HOM05D006217 ORTHO05D008480 1.5e-18 98.6 142 86.6
Glyma.05G032300 Glycine max HOM05D006217 ORTHO05D008480 1.5e-18 98.6 142 85.2
RcHm_v2.0_Chr7g0179951 Rosa chinensis HOM05D006217 ORTHO05D008480 1.5e-18 98.6 142 87.3
FAN04G0516 Fragaria x ananassa HOM05D006217 ORTHO05D008480 1.9e-18 98.2 142 87.3
MD06G1183200 Malus domestica HOM05D006217 ORTHO05D008480 1.9e-18 98.2 142 88.0
Peaxi162Scf00017g02228 Petunia axillaris HOM05D006217 ORTHO05D008480 2.5e-18 97.8 142 85.9
PGSC0003DMG400024573 Solanum tuberosum HOM05D006217 ORTHO05D008480 3.2e-18 97.4 142 85.2
CANSAT80G1888 Cannabis sativa HOM05D006217 ORTHO05D008480 4.2e-18 97.1 142 88.0
HanXRQChr16g0503451 Helianthus annuus HOM05D006217 ORTHO05D008480 4.2e-18 97.1 142 85.2
Solyc03g113630.3 Solanum lycopersicum HOM05D006217 ORTHO05D008480 4.2e-18 97.1 142 85.2
Sopen03g032670 Solanum pennellii HOM05D006217 ORTHO05D008480 4.2e-18 97.1 142 85.2
QL10p013967 Quercus lobata HOM05D006217 ORTHO05D008480 5.5e-18 96.7 141 87.2
VMungo1215G2521 Vigna mungo HOM05D006217 ORTHO05D008480 5.5e-18 96.7 142 85.9
Sabra15G0093400 Salix brachista HOM05D006217 ORTHO05D008480 7.2e-18 96.3 140 85.0
Lsat_1_v5_gn_4_74540 Lactuca sativa HOM05D006217 ORTHO05D008480 1.2e-17 95.5 142 85.2
ECA232G4291 Erigeron canadensis HOM05D006217 ORTHO05D008480 1.6e-17 95.1 142 86.6
Ciclev10018817m.g Citrus clementina HOM05D006217 ORTHO05D008480 2.1e-17 94.7 142 83.8
Atru.BG.200.p Acer truncatum HOM05D006217 ORTHO05D008480 2.7e-17 94.4 142 86.6
MSTRG.23079 Avicennia marina HOM05D006217 ORTHO05D008480 3.6e-17 94.0 142 80.3
SalBow5G1548 Salvia bowleyana HOM05D006217 ORTHO05D008480 4.7e-17 93.6 142 83.8
TWI15G0191 Tripterygium wilfordii HOM05D006217 ORTHO05D008480 4.7e-17 93.6 142 88.0
Phvul.003G195800 Phaseolus vulgaris HOM05D006217 ORTHO05D008480 6.1e-17 93.2 142 81.0
Migut.I00075 Erythranthe guttata HOM05D006217 ORTHO05D008480 1.8e-16 91.7 142 81.0
AagrBONN_evm.TU.Sc2ySwM_362.2637 Anthoceros agrestis HOM05D006217 ORTHO05D008480 6.7e-16 89.7 142 83.1
CDE10G0055 Ceratophyllum demersum HOM05D006217 ORTHO05D008480 6.7e-16 89.7 48 72.9
CDE10G0083 Ceratophyllum demersum HOM05D006217 ORTHO05D008480 6.7e-16 89.7 48 72.9
ATR0681G229 Amborella trichopoda HOM05D006217 ORTHO05D008480 8.8e-16 89.4 141 53.9
unitig_750.g28484 Utricularia gibba HOM05D006217 ORTHO05D008480 4.4e-15 87.0 48 70.8
SGA_v2.0_scaffold56G20089 Striga asiatica HOM05D006217 ORTHO05D008480 5.7e-15 86.7 142 80.3
MBI15_g21026_MAGBIO Magnolia biondii HOM05D006217 ORTHO05D008480 7.4e-15 86.3 48 72.9
SEGI_07964 Sequoiadendron giganteum HOM05D006217 ORTHO05D008480 1.7e-14 85.1 142 51.4
Pp3c11_11830 Physcomitrium patens HOM05D006217 ORTHO05D008480 1.8e-13 81.6 142 80.3
SMO353G0114 Selaginella moellendorffii HOM05D006217 ORTHO05D008480 3.1e-13 80.9 48 66.7
Mapoly0003s0152 Marchantia polymorpha HOM05D006217 ORTHO05D008480 4.1e-13 80.5 142 80.3
Lsat_1_v5_gn_3_59501 Lactuca sativa HOM05D001195 ORTHO05D001138 5.3e-13 80.1 48 66.7
CBR_g63077 Chara braunii HOM05D006217 ORTHO05D008480 2.2e-11 74.7 48 62.5
HPP92_019917 Vanilla planifolia HOM05D006217 ORTHO05D008480 1.1e-10 72.4 48 60.4
Actinidia04949 Actinidia chinensis HOM05D006217 ORTHO05D008480 8.0e-09 66.2 132 78.0
Zm00001eb331750 Zea mays HOM05D006217 ORTHO05D008480 1.8e-08 65.1 43 62.8
Os03g0824100 Oryza sativa ssp. japonica HOM05D006217 ORTHO05D008480 3.0e-08 64.3 40 67.5


User provided reference genes

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