Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 0.0e+00 1405.2 700 100.0
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 0.0e+00 1296.2 700 92.9
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 2.0e-268 929.1 679 71.4
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 1.8e-221 773.1 692 59.8
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 3.6e-217 758.8 714 56.7
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.8e-213 746.5 708 56.9
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 1.6e-212 743.4 716 57.0
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 1.9e-210 736.5 703 57.0
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 8.9e-208 727.6 521 69.9
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 3.4e-207 725.7 721 55.1
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 2.9e-206 722.6 716 55.6
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 2.4e-205 719.5 701 55.9
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 2.1e-201 706.4 619 59.3
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 3.6e-201 705.7 711 54.0
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.9e-197 693.3 669 56.1
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 7.1e-197 691.4 716 53.5
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.6e-196 690.3 716 53.6
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 1.6e-196 690.3 714 52.5
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 2.1e-196 689.9 716 52.9
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 9.5e-194 681.0 648 54.8
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 1.6e-193 680.2 666 53.5
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 2.8e-193 679.5 715 53.1
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 4.7e-193 678.7 703 52.6
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 8.1e-193 677.9 715 53.0
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 8.1e-193 677.9 794 49.4
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.1e-192 677.6 645 55.7
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 8.9e-192 674.5 649 56.4
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 2.6e-191 672.9 716 51.5
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 2.6e-191 672.9 711 52.6
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 7.6e-191 671.4 713 51.9
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 6.4e-190 668.3 716 51.0
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 6.4e-190 668.3 705 51.5
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 8.4e-190 667.9 705 51.6
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 1.1e-189 667.5 660 52.9
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.4e-189 665.2 705 51.3
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 9.2e-189 664.5 661 53.1
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.7e-187 660.2 705 50.9
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 2.5e-186 656.4 637 53.1
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 7.3e-186 654.8 720 51.0
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 7.3e-186 654.8 720 50.7
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 3.6e-185 652.5 721 51.2
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 1.8e-184 650.2 732 50.5
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 3.1e-184 649.4 668 52.7
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 6.8e-184 648.3 644 53.6
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 1.5e-183 647.1 656 52.1
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 2.6e-183 646.4 719 50.9
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 4.4e-183 645.6 668 52.5
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 1.7e-182 643.7 713 50.6
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 3.8e-182 642.5 712 50.0
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 4.6e-180 635.6 708 49.7
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 3.3e-178 629.4 617 54.6
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 7.3e-178 628.2 640 52.8
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.6e-177 627.1 664 51.2
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 2.1e-177 626.7 665 51.1
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 2.8e-177 626.3 627 55.7
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 1.8e-176 623.6 643 53.7
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 9.3e-173 611.3 732 47.8
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.7e-171 607.1 705 47.9
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 3.3e-170 602.8 701 49.2
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 7.4e-170 601.7 630 51.3
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 3.6e-169 599.4 630 50.8
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 1.4e-168 597.4 656 49.8
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.8e-168 597.0 689 48.9
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.2e-167 594.3 665 48.7
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.5e-167 594.0 665 48.7
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 2.6e-167 593.2 660 48.9
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 3.4e-167 592.8 706 47.3
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 6.4e-166 588.6 721 46.0
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 8.4e-166 588.2 666 48.3
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 8.4e-166 588.2 707 46.1
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.6e-164 583.9 666 47.9
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 2.7e-164 583.2 654 49.5
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.3e-163 580.9 619 51.1
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 6.2e-161 572.0 688 46.4
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 6.2e-161 572.0 667 48.0
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 6.2e-161 572.0 671 48.3
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 1.4e-160 570.9 644 49.1
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 5.5e-157 558.9 476 61.6
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 8.7e-155 551.6 496 56.7
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.9e-154 550.4 648 47.7
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 2.1e-153 547.0 666 46.5
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 6.5e-150 535.4 671 44.7
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 8.5e-150 535.0 495 56.8
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 1.6e-148 530.8 685 45.1
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.1e-144 518.1 535 52.3
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 8.5e-142 508.4 609 48.6
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 5.7e-138 495.7 609 48.1
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 9.4e-133 478.4 506 50.8
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 2.0e-130 470.7 491 51.7
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.4e-128 464.5 378 60.6
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 3.5e-127 459.9 345 66.7
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 1.5e-122 444.5 310 70.0
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 8.3e-113 412.1 404 56.2
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 1.6e-108 397.9 294 66.3
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.1e-101 375.2 306 61.4
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 3.3e-101 373.6 651 37.5
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 1.0e-99 368.6 648 36.0
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 3.0e-94 350.5 342 54.4
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 2.6e-90 337.4 339 54.3
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 4.4e-90 336.7 693 33.0
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.7e-86 324.7 629 34.3
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 3.2e-80 303.9 378 46.8
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 2.4e-75 287.7 377 45.9
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 8.4e-73 279.3 312 52.2
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 2.5e-69 267.7 327 45.9
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.2e-66 258.8 608 31.1
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 4.4e-66 256.9 563 31.8
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 9.9e-58 229.2 384 39.8
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 1.1e-45 189.1 142 61.3
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.8e-43 181.8 329 36.8
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 9.0e-43 179.5 189 48.7
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 3.4e-42 177.6 184 57.1
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-40 171.8 273 38.8
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 3.1e-35 154.5 235 38.7
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 7.2e-32 143.3 152 47.4
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 1.4e-30 139.0 120 54.2
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 5.1e-30 137.1 134 52.2
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 8.8e-30 136.3 188 44.1
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 1.4e-19 102.4 168 36.3
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 7.7e-18 96.7 78 59.0
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 1.3e-17 95.9 131 42.7
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 2.2e-17 95.1 123 43.1
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.6e-15 89.0 77 61.0
Mapoly0061s0136 Marchantia polymorpha HOM05D028917 ORTHO05D023487 1.5e-13 82.4 357 24.1
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 2.6e-13 81.6 58 62.1
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 1.7e-12 79.0 214 29.4
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 3.5e-10 71.2 157 35.7
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 3.5e-10 71.2 220 25.0
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 8.5e-09 66.6 66 47.0
AagrBONN_evm.TU.Sc2ySwM_362.2567 Anthoceros agrestis HOM05D028917 ORTHO05D023487 4.2e-08 64.3 153 28.8


User provided reference genes

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