Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020525 Chenopodium quinoa HOM05D006362 ORTHO05D008295 0.0e+00 1149.4 595 100.0
AUR62015672 Chenopodium quinoa HOM05D006362 ORTHO05D008295 1.1e-278 963.0 556 91.7
Ah.06g182950 Amaranthus hybridus HOM05D006362 ORTHO05D008295 2.1e-266 922.2 558 85.7
EL10Ac4g07932 Beta vulgaris HOM05D006362 ORTHO05D008295 3.3e-264 914.8 557 86.0
Sc14g0006480 Simmondsia chinensis HOM05D006362 ORTHO05D008295 9.1e-246 853.6 556 79.0
GSVIVG01001989001 Vitis vinifera HOM05D006362 ORTHO05D008295 1.1e-238 830.1 553 77.4
Prupe.4G206200 Prunus persica HOM05D006362 ORTHO05D008295 1.3e-236 823.2 551 78.0
Manes.15G074800 Manihot esculenta HOM05D006362 ORTHO05D008295 2.3e-236 822.4 553 77.6
Thecc.07G046200 Theobroma cacao HOM05D006362 ORTHO05D008295 9.5e-235 817.0 555 75.7
QL08p012554 Quercus lobata HOM05D006362 ORTHO05D008295 2.8e-234 815.5 551 76.6
Gorai.002G084800 Gossypium raimondii HOM05D006362 ORTHO05D008295 6.1e-234 814.3 554 75.6
Gohir.A01G076501 Gossypium hirsutum HOM05D006362 ORTHO05D008295 6.8e-233 810.8 554 75.1
Dinv40729 Davidia involucrata HOM05D006362 ORTHO05D008295 1.5e-232 809.7 552 75.5
TAR626G1624 Trochodendron aralioides HOM05D006362 ORTHO05D008295 2.0e-232 809.3 553 76.7
Ciclev10007871m.g Citrus clementina HOM05D006362 ORTHO05D008295 7.5e-232 807.4 553 76.3
THA.LOC104818092 Tarenaya hassleriana HOM05D006362 ORTHO05D008295 2.2e-231 805.8 554 76.0
Potri.011G135800 Populus trichocarpa HOM05D006362 ORTHO05D008295 2.8e-231 805.4 551 75.9
Cfa020397 Carpinus fangiana HOM05D006362 ORTHO05D008295 3.7e-231 805.1 548 76.5
Duzib268G0905 Durio zibethinus HOM05D006362 ORTHO05D008295 6.3e-231 804.3 554 74.0
TWI38G1299 Tripterygium wilfordii HOM05D006362 ORTHO05D008295 8.3e-231 803.9 548 76.5
Hma1.2p1_1344F.1_g277040 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 9.2e-230 800.4 558 75.3
CANSAT11G0353 Cannabis sativa HOM05D006362 ORTHO05D008295 4.5e-229 798.1 552 75.0
RcHm_v2.0_Chr4g0399351 Rosa chinensis HOM05D006362 ORTHO05D008295 4.5e-229 798.1 560 76.1
MD03G1209000 Malus domestica HOM05D006362 ORTHO05D008295 5.9e-229 797.7 547 76.2
Gohir.D01G064000 Gossypium hirsutum HOM05D006362 ORTHO05D008295 7.8e-229 797.3 554 74.5
Atru.chr2.3247 Acer truncatum HOM05D006362 ORTHO05D008295 1.0e-228 797.0 552 74.6
FvH4_4g07170 Fragaria vesca HOM05D006362 ORTHO05D008295 3.9e-228 795.0 560 75.7
FAN12G0341 Fragaria x ananassa HOM05D006362 ORTHO05D008295 6.6e-228 794.3 560 75.7
FAN22G0212 Fragaria x ananassa HOM05D006362 ORTHO05D008295 6.6e-228 794.3 565 75.0
Sed0025840 Sechium edule HOM05D006362 ORTHO05D008295 2.1e-226 789.3 553 72.5
CsaV3_1G044730 Cucumis sativus L. HOM05D006362 ORTHO05D008295 2.8e-226 788.9 553 73.4
AT3G15160 Arabidopsis thaliana HOM05D006362 ORTHO05D008295 8.0e-226 787.3 549 74.1
Eucgr.F03442 Eucalyptus grandis HOM05D006362 ORTHO05D008295 1.0e-225 786.9 554 74.7
Solyc10g006410.3 Solanum lycopersicum HOM05D006362 ORTHO05D008295 1.4e-225 786.6 550 72.2
Aqoxy1G03661 Aquilegia oxysepala HOM05D006362 ORTHO05D008295 1.8e-225 786.2 547 73.5
CARHR090140 Cardamine hirsuta HOM05D006362 ORTHO05D008295 1.8e-225 786.2 547 74.4
Thhalv10020417m.g Eutrema salsugineum HOM05D006362 ORTHO05D008295 2.3e-225 785.8 549 74.5
MELO3C018085.2 Cucumis melo HOM05D006362 ORTHO05D008295 4.0e-225 785.0 553 72.9
AL3G27550 Arabidopsis lyrata HOM05D006362 ORTHO05D008295 6.8e-225 784.3 549 74.5
Aa31LG8G2360 Aethionema arabicum HOM05D006362 ORTHO05D008295 8.9e-225 783.9 549 73.4
Carub.0003s1481 Capsella rubella HOM05D006362 ORTHO05D008295 8.9e-225 783.9 549 74.1
Sopen10g002360 Solanum pennellii HOM05D006362 ORTHO05D008295 5.8e-224 781.2 550 71.6
Nn1g07069 Nelumbo nucifera HOM05D006362 ORTHO05D008295 9.8e-224 780.4 555 73.0
BolC3t17030H Brassica oleracea HOM05D006362 ORTHO05D008295 1.7e-223 779.6 549 74.0
Sp3g13370 Schrenkiella parvula HOM05D006362 ORTHO05D008295 1.7e-223 779.6 549 74.5
A03p39180 Brassica napus HOM05D006362 ORTHO05D008295 2.9e-223 778.9 549 74.0
Nitab4.5_0002342g0020 Nicotiana tabacum HOM05D006362 ORTHO05D008295 2.9e-223 778.9 550 72.5
BraA03t13067Z Brassica rapa HOM05D006362 ORTHO05D008295 3.7e-223 778.5 549 73.8
C03p47540 Brassica napus HOM05D006362 ORTHO05D008295 4.9e-223 778.1 549 73.8
PGR031G2573 Punica granatum HOM05D006362 ORTHO05D008295 6.4e-223 777.7 549 75.0
Lalb_Chr03g0030071 Lupinus albus HOM05D006362 ORTHO05D008295 1.9e-222 776.2 554 73.1
CAN.G1781.12 Capsicum annuum HOM05D006362 ORTHO05D008295 4.1e-222 775.0 547 71.3
Glyma.06G271800 Glycine max HOM05D006362 ORTHO05D008295 9.2e-222 773.9 550 72.9
arahy.Tifrunner.gnm1.ann1.GJJ2CM Arachis hypogaea HOM05D006362 ORTHO05D008295 1.2e-221 773.5 551 72.2
arahy.Tifrunner.gnm1.ann1.Z96I2W Arachis hypogaea HOM05D006362 ORTHO05D008295 3.5e-221 771.9 548 72.4
Phvul.011G136800 Phaseolus vulgaris HOM05D006362 ORTHO05D008295 4.6e-221 771.5 552 72.8
TPR.G25875 Trifolium pratense HOM05D006362 ORTHO05D008295 7.8e-221 770.8 553 71.1
Oeu021406.2 Olea europaea HOM05D006362 ORTHO05D008295 1.3e-220 770.0 554 70.2
Psat7g162880 Pisum sativum HOM05D006362 ORTHO05D008295 1.3e-220 770.0 553 71.1
Ca_18860_v3 Cicer arietinum L. HOM05D006362 ORTHO05D008295 3.0e-220 768.8 553 70.7
Cc05_g13400 Coffea canephora HOM05D006362 ORTHO05D008295 5.0e-220 768.1 550 71.8
Lj3g0015245 Lotus japonicus HOM05D006362 ORTHO05D008295 3.3e-219 765.4 549 72.3
Medtr4g081050 Medicago truncatula HOM05D006362 ORTHO05D008295 9.5e-219 763.8 553 70.7
Haze_09637 Corylus avellana HOM05D006362 ORTHO05D008295 1.2e-218 763.5 601 69.2
PSO832G4364 Papaver somniferum HOM05D006362 ORTHO05D008295 2.8e-218 762.3 552 71.4
HanXRQChr13g0407741 Helianthus annuus HOM05D006362 ORTHO05D008295 1.2e-216 756.9 546 71.2
BcaC01g03890 Brassica carinata HOM05D006362 ORTHO05D008295 1.1e-214 750.4 571 69.5
Gorai.009G425700 Gossypium raimondii HOM05D006362 ORTHO05D008295 4.1e-214 748.4 555 70.8
DCAR_022536 Daucus carota HOM05D006362 ORTHO05D008295 1.6e-213 746.5 574 68.5
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 2.7e-213 745.7 555 70.6
Hund23291 Selenicereus undatus HOM05D006362 ORTHO05D008295 1.0e-212 743.8 497 78.5
ECA240G1610 Erigeron canadensis HOM05D006362 ORTHO05D008295 1.5e-211 740.0 546 70.0
ATR0697G203 Amborella trichopoda HOM05D006362 ORTHO05D008295 9.5e-211 737.3 547 69.1
Peaxi162Scf00387g00613 Petunia axillaris HOM05D006362 ORTHO05D008295 6.8e-209 731.1 541 69.5
CDE05G0917 Ceratophyllum demersum HOM05D006362 ORTHO05D008295 4.4e-208 728.4 549 68.3
HPP92_009387 Vanilla planifolia HOM05D006362 ORTHO05D008295 2.2e-207 726.1 550 68.9
FAN17G1244 Fragaria x ananassa HOM05D006362 ORTHO05D008295 3.0e-204 715.7 586 68.3
Gohir.A04G020300 Gossypium hirsutum HOM05D006362 ORTHO05D008295 3.0e-204 715.7 555 69.0
Os04g0626900 Oryza sativa ssp. japonica HOM05D006362 ORTHO05D008295 8.6e-204 714.1 554 66.8
Rhsim06G0213400 Rhododendron simsii HOM05D006362 ORTHO05D008295 1.1e-203 713.8 593 65.8
SGA_v2.0_scaffold80G25930 Striga asiatica HOM05D006362 ORTHO05D008295 1.9e-203 713.0 552 66.7
Lj1C868T5 Lonicera japonica HOM05D006362 ORTHO05D008295 6.4e-199 698.0 522 71.3
ClCG05G014560 Citrullus lanatus HOM05D006362 ORTHO05D008295 3.2e-198 695.7 571 65.8
Lsat_1_v5_gn_5_81640 Lactuca sativa HOM05D006362 ORTHO05D008295 2.1e-197 693.0 550 66.4
Sabra11G0122000 Salix brachista HOM05D006362 ORTHO05D008295 1.3e-196 690.3 588 66.0
Nitab4.5_0002229g0190 Nicotiana tabacum HOM05D006362 ORTHO05D008295 1.6e-194 683.3 571 64.4
Migut.M01793 Erythranthe guttata HOM05D006362 ORTHO05D008295 2.9e-191 672.5 548 64.2
CiPaw.11G185900 Carya illinoinensis HOM05D006362 ORTHO05D008295 1.8e-185 653.3 430 79.1
Gohir.D05G366200 Gossypium hirsutum HOM05D006362 ORTHO05D008295 1.3e-170 604.0 430 72.8
Mapoly0021s0009 Marchantia polymorpha HOM05D006362 ORTHO05D008295 1.4e-166 590.5 554 57.6
Pp3c24_12510 Physcomitrium patens HOM05D006362 ORTHO05D008295 1.6e-157 560.5 551 54.1
vmacro11753 Vaccinium macrocarpon HOM05D006362 ORTHO05D008295 8.2e-154 548.1 671 48.6
SMO115G0345 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 3.1e-153 546.2 545 56.0
Pp3c23_6050 Physcomitrium patens HOM05D006362 ORTHO05D008295 8.2e-138 495.0 550 51.8
AagrBONN_evm.TU.Sc2ySwM_117.2426 Anthoceros agrestis HOM05D006362 ORTHO05D008295 7.7e-136 488.4 555 48.8
BolC3t17019H Brassica oleracea HOM05D006362 ORTHO05D008295 4.1e-121 439.5 321 72.9
PGSC0003DMG403014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 1.2e-104 384.8 260 73.8
HPP92_009392 Vanilla planifolia HOM05D006362 ORTHO05D008295 2.3e-103 380.6 275 69.5
Zm00001eb070060 Zea mays HOM05D006362 ORTHO05D008295 1.2e-93 348.2 310 59.0
CSS0013960 Camellia sinensis var. sinensis HOM05D006362 ORTHO05D008295 3.5e-88 330.1 221 74.7
PGSC0003DMG402014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 8.1e-69 265.8 195 66.7
SEGI_18975 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 6.5e-50 203.0 165 64.8
CBR_g57499 Chara braunii HOM05D006362 ORTHO05D008295 3.3e-46 190.7 240 42.1
Rhsim12G0205700 Rhododendron simsii HOM05D006362 ORTHO05D008295 2.2e-45 188.0 298 45.6
Gorai.002G084600 Gossypium raimondii HOM05D006362 ORTHO05D008295 3.0e-39 167.5 120 70.0
Gohir.D01G063866 Gossypium hirsutum HOM05D006362 ORTHO05D008295 9.7e-38 162.5 120 68.3
Cpa.g.sc131.92 Carica papaya HOM05D006362 ORTHO05D008295 2.4e-36 157.9 116 72.4
SHI31860 Sapria himalayana HOM05D006362 ORTHO05D008295 5.3e-36 156.8 147 57.1
SEGI_13710 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 5.0e-34 150.2 131 58.0
VMungo0251G2436 Vigna mungo HOM05D006362 ORTHO05D008295 1.4e-31 142.1 115 67.0
Hma1.2p1_1609F.1_g293480 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 4.8e-29 133.7 103 69.9
SMO347G0562 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.6e-24 118.6 176 44.3
SMO228G0126 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.5e-22 112.1 190 38.9
HPP92_009393 Vanilla planifolia HOM05D006362 ORTHO05D008295 6.3e-21 106.7 84 65.5
CBR_g57501 Chara braunii HOM05D006362 ORTHO05D008295 1.7e-18 98.6 117 47.0
SMO167G0061 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.2e-16 92.4 138 45.7
SMO111G0176 Selaginella moellendorffii HOM05D013632 ORTHO05D008295 1.6e-16 92.0 96 51.0
HanXRQChr16g0507081 Helianthus annuus HOM05D006362 ORTHO05D008295 3.6e-16 90.9 82 62.2
SMO122G0015 Selaginella moellendorffii HOM05D006362 ORTHO05D374567 7.0e-12 76.6 97 46.4
Cc02_g13940 Coffea canephora HOM05D006362 ORTHO05D008295 1.6e-11 75.5 55 72.7
BcaB04g20946 Brassica carinata HOM05D006362 ORTHO05D008295 6.5e-10 70.1 45 71.1
SMO014G0021 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 8.5e-10 69.7 176 32.4
SMO009G0006 Selaginella moellendorffii HOM05D013632 ORTHO05D379378 1.9e-09 68.6 161 37.3
SMO118G0508 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 2.5e-09 68.2 208 29.3
SMO144G0005 Selaginella moellendorffii HOM05D013632 ORTHO05D378182 1.0e-07 62.8 96 40.6


User provided reference genes

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