Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020436 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.1e-215 751.5 381 100.0
AUR62043719 Chenopodium quinoa HOM05D008320 ORTHO05D012961 1.4e-122 443.7 339 69.0
AUR62042466 Chenopodium quinoa HOM05D008320 ORTHO05D012961 3.0e-93 346.3 308 60.7
AUR62028448 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.1e-90 337.8 228 73.7
AUR62038967 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.2e-75 287.0 237 57.4
AUR62015374 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.5e-71 273.5 282 50.0
AUR62035341 Chenopodium quinoa HOM05D008320 ORTHO05D009883 5.6e-71 272.3 348 50.3
AUR62042136 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.2e-60 238.0 277 45.1
AUR62019630 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.9e-59 233.4 237 51.5
AUR62033779 Chenopodium quinoa HOM05D008320 ORTHO05D009883 4.9e-59 232.6 234 55.1
AUR62039152 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.3e-56 223.8 289 42.2
EL10As14g24081 Beta vulgaris HOM05D008320 ORTHO05D009883 5.1e-56 222.6 274 45.3
EL10Ac1g01700 Beta vulgaris HOM05D008320 ORTHO05D009883 2.0e-52 210.7 345 37.4
AUR62041270 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.4e-50 203.8 286 42.0
AUR62038601 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.0e-48 198.4 273 41.4
AUR62042371 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.5e-44 184.5 180 55.6
AUR62033784 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.4e-44 183.3 250 40.8
AUR62037987 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.8e-43 179.9 242 42.1
AUR62034935 Chenopodium quinoa HOM05D008320 ORTHO05D009883 4.2e-34 149.8 320 34.4
AUR62034042 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.0e-32 143.7 122 54.1
AUR62017405 Chenopodium quinoa HOM05D008320 ORTHO05D009883 6.6e-32 142.5 249 35.7
AUR62037028 Chenopodium quinoa HOM05D008320 ORTHO05D012961 9.6e-31 138.7 289 32.2
AUR62039435 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.6e-30 136.7 160 47.5
EL10Ac6g14284 Beta vulgaris HOM05D001399 ORTHO05D009883 1.6e-25 121.3 242 34.7
AUR62042854 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.9e-24 116.7 159 44.0
AUR62037064 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.5e-23 114.0 98 53.1
AUR62041835 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.5e-23 114.0 268 31.3
AUR62033075 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.3e-23 113.6 89 62.9
AUR62014831 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.3e-22 111.7 241 33.6
AUR62017232 Chenopodium quinoa HOM05D008448 ORTHO05D009883 3.7e-22 110.2 268 30.2
AUR62041092 Chenopodium quinoa HOM05D008448 ORTHO05D009883 6.2e-22 109.4 301 29.2
AUR62038853 Chenopodium quinoa HOM05D008320 ORTHO05D009883 8.1e-22 109.0 126 45.2
AUR62029691 Chenopodium quinoa HOM05D008320 ORTHO05D012961 1.1e-21 108.6 284 32.0
AUR62044200 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.1e-21 108.6 243 30.5
AUR62025566 Chenopodium quinoa HOM05D008448 ORTHO05D009883 4.9e-19 99.8 253 31.2
Ah.01g016480 Amaranthus hybridus HOM05D008320 ORTHO05D009883 6.5e-19 99.4 108 48.1
Ah.01g016310 Amaranthus hybridus HOM05D008320 ORTHO05D009883 8.4e-19 99.0 108 48.1
AUR62025563 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.1e-18 98.6 250 30.8
ECA238G0783 Erigeron canadensis HOM05D007651 ORTHO05D000898 2.5e-18 97.4 227 32.2
AUR62019474 Chenopodium quinoa HOM05D008448 ORTHO05D009883 3.2e-18 97.1 222 33.3
Ah.01g016300 Amaranthus hybridus HOM05D008448 ORTHO05D009883 5.5e-18 96.3 130 39.2
Lsat_1_v5_gn_2_81300 Lactuca sativa HOM05D007651 ORTHO05D000898 1.2e-17 95.1 227 32.2
AUR62015725 Chenopodium quinoa HOM05D001371 ORTHO05D001319 2.1e-17 94.4 123 38.2
AUR62039782 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.1e-17 94.4 235 30.6
Lsat_1_v5_gn_4_155061 Lactuca sativa HOM05D007651 ORTHO05D000898 2.1e-17 94.4 219 33.3
CAN.G11.14 Capsicum annuum HOM05D007651 ORTHO05D001192 3.5e-17 93.6 216 32.9
AUR62018712 Chenopodium quinoa HOM05D008448 ORTHO05D009883 4.6e-17 93.2 204 32.4
HanXRQChr09g0262351 Helianthus annuus HOM05D007651 ORTHO05D000898 4.6e-17 93.2 219 32.4
QL02p048445 Quercus lobata HOM05D007651 ORTHO05D001192 4.6e-17 93.2 216 31.9
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 6.0e-17 92.8 219 32.9
HanXRQChr11g0325241 Helianthus annuus HOM05D007651 ORTHO05D000898 7.9e-17 92.4 297 29.0
Peaxi162Scf00104g01921 Petunia axillaris HOM05D007651 ORTHO05D000898 7.9e-17 92.4 208 33.7
Ah.01g016470 Amaranthus hybridus HOM05D008448 ORTHO05D009883 1.0e-16 92.0 130 37.7
Gohir.D06G186000 Gossypium hirsutum HOM05D007651 ORTHO05D000898 1.3e-16 91.7 216 31.9
Sopen03g007480 Solanum pennellii HOM05D007651 ORTHO05D000898 1.3e-16 91.7 208 32.7
PGSC0003DMG400016690 Solanum tuberosum HOM05D007651 ORTHO05D000898 1.3e-16 91.7 208 32.7
Nitab4.5_0000625g0020 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.8e-16 91.3 208 32.7
Nitab4.5_0000901g0120 Nicotiana tabacum HOM05D007651 ORTHO05D001192 1.8e-16 91.3 208 32.7
Solyc03g043600.3 Solanum lycopersicum HOM05D007651 ORTHO05D000898 2.3e-16 90.9 208 32.2
Manes.03G097100 Manihot esculenta HOM05D007651 ORTHO05D001192 3.0e-16 90.5 216 31.9
SGA_v2.0_scaffold174G39280 Striga asiatica HOM05D007651 ORTHO05D000898 3.0e-16 90.5 208 31.7
THA.LOC104805598 Tarenaya hassleriana HOM05D007651 ORTHO05D000898 3.0e-16 90.5 216 31.5
MD09G1260400 Malus domestica HOM05D007651 ORTHO05D001192 5.1e-16 89.7 219 32.0
Thecc.10G176700 Theobroma cacao HOM05D007651 ORTHO05D001192 5.1e-16 89.7 216 31.9
Gorai.010G218300 Gossypium raimondii HOM05D007651 ORTHO05D000898 8.7e-16 89.0 216 31.5
Glyma.10G201800 Glycine max HOM05D007651 ORTHO05D000898 1.1e-15 88.6 216 30.6
AUR62021183 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.5e-15 87.4 221 30.3
AUR62027995 Chenopodium quinoa HOM05D008448 ORTHO05D009883 7.4e-15 85.9 231 30.7
AUR62012049 Chenopodium quinoa HOM05D008320 ORTHO05D009883 9.6e-15 85.5 74 58.1
AUR62035592 Chenopodium quinoa HOM05D008448 ORTHO05D009883 9.6e-15 85.5 242 27.7
Nn3g19299 Nelumbo nucifera HOM05D007651 ORTHO05D000898 3.7e-14 83.6 223 29.1
AUR62035231 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-13 81.6 214 28.5
AUR62040974 Chenopodium quinoa HOM05D008320 ORTHO05D138408 6.9e-13 79.3 74 50.0
AUR62002655 Chenopodium quinoa HOM05D008320 ORTHO05D009883 5.8e-12 76.3 68 55.9
AUR62015292 Chenopodium quinoa HOM05D008448 ORTHO05D009883 7.6e-12 75.9 109 40.4
AUR62037412 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.0e-11 75.5 206 31.1
AUR62042631 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.0e-11 75.5 202 27.2
AUR62016684 Chenopodium quinoa HOM05D000554 ORTHO05D002829 2.2e-11 74.3 171 29.2
AUR62009170 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.9e-11 73.9 80 50.0
AUR62033089 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.8e-11 73.6 152 34.2
AUR62041020 Chenopodium quinoa HOM05D008448 ORTHO05D009883 5.0e-11 73.2 362 21.3
FAN20G1880 Fragaria x ananassa HOM05D004096 ORTHO05D000898 5.0e-11 73.2 215 28.8
AUR62030606 Chenopodium quinoa HOM05D008448 ORTHO05D009883 6.5e-11 72.8 225 27.6
FvH4_2g09911 Fragaria vesca HOM05D004096 ORTHO05D000898 6.5e-11 72.8 215 27.9
Os11g0307600 Oryza sativa ssp. japonica HOM05D002461 ORTHO05D009883 6.5e-11 72.8 243 28.4
AUR62030114 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-10 71.6 224 27.7
FAN24G1944 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.4e-10 71.6 215 27.4
FAN27G1870 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.9e-10 71.2 215 27.4
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 1.9e-10 71.2 214 28.5
AUR62005044 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.2e-10 70.1 202 28.7
AUR62028801 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.2e-10 69.3 204 29.9
AUR62006829 Chenopodium quinoa HOM05D002461 ORTHO05D000898 9.3e-10 68.9 202 28.7
AUR62027906 Chenopodium quinoa HOM05D006463 ORTHO05D002997 9.3e-10 68.9 189 28.6
AUR62033389 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.2e-09 68.6 202 28.2
AUR62040414 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.2e-09 68.6 189 28.0
Rhsim11G0015600 Rhododendron simsii HOM05D011344 ORTHO05D016379 1.2e-09 68.6 196 28.1
Ah.05g176190 Amaranthus hybridus HOM05D006463 ORTHO05D002997 2.1e-09 67.8 189 27.5
Ah.10g026780 Amaranthus hybridus HOM05D006463 ORTHO05D002997 2.1e-09 67.8 182 25.8
Ah.03g145400 Amaranthus hybridus HOM05D006463 ORTHO05D002997 2.7e-09 67.4 188 27.7
AUR62006070 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.7e-09 67.4 202 28.2
AUR62026206 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.7e-09 67.4 263 25.1
Ah.14g082230 Amaranthus hybridus HOM05D006463 ORTHO05D002997 3.5e-09 67.0 189 27.0
Ah.14g083500 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.5e-09 67.0 246 25.6
AUR62002947 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.5e-09 67.0 175 31.4
Ah.16g106940 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.6e-09 66.6 246 25.6
AUR62034039 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.6e-09 66.6 202 27.7
AUR62033155 Chenopodium quinoa HOM05D006463 ORTHO05D002997 6.1e-09 66.2 182 28.6
AUR62025070 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.3e-08 65.1 184 26.1
AUR62026690 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.3e-08 65.1 100 37.0
AUR62042613 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.3e-08 65.1 190 27.4
RcHm_v2.0_Chr6g0266661 Rosa chinensis HOM05D007993 ORTHO05D000898 1.3e-08 65.1 217 24.4
AUR62022496 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.8e-08 64.7 189 27.5
Os01g0152500 Oryza sativa ssp. japonica HOM05D008448 ORTHO05D009883 1.8e-08 64.7 239 23.0
AUR62011252 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.3e-08 64.3 202 28.2
vmacro09225 Vaccinium macrocarpon HOM05D007651 ORTHO05D000898 2.3e-08 64.3 203 25.6
AUR62017758 Chenopodium quinoa HOM05D007817 ORTHO05D010493 3.0e-08 63.9 189 23.8
AUR62034174 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.9e-08 63.5 202 28.2
Rhsim05G0160000 Rhododendron simsii HOM05D011344 ORTHO05D016379 3.9e-08 63.5 197 27.9
AUR62010784 Chenopodium quinoa HOM05D007817 ORTHO05D010493 5.1e-08 63.2 175 24.6
AUR62004005 Chenopodium quinoa HOM05D007817 ORTHO05D010493 6.7e-08 62.8 175 23.4
AUR62010454 Chenopodium quinoa HOM05D007817 ORTHO05D010493 6.7e-08 62.8 175 29.1
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 8.7e-08 62.4 178 29.2
AUR62003902 Chenopodium quinoa HOM05D007817 ORTHO05D010493 1.5e-07 61.6 189 23.8
Os02g0517900 Oryza sativa ssp. japonica HOM05D002461 ORTHO05D000898 1.5e-07 61.6 192 24.5
AUR62025987 Chenopodium quinoa HOM05D007817 ORTHO05D010493 2.5e-07 60.8 188 24.5
AUR62039822 Chenopodium quinoa HOM05D007817 ORTHO05D010493 2.5e-07 60.8 189 23.3
AUR62031912 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.3e-07 60.5 188 25.5
Hund23563 Selenicereus undatus HOM05D008410 ORTHO05D002997 3.3e-07 60.5 188 26.1
RhsimUnG0240000 Rhododendron simsii HOM05D009719 ORTHO05D011041 4.3e-07 60.1 205 23.9
AUR62031995 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.3e-06 58.5 97 33.0
Hund10315 Selenicereus undatus HOM05D008410 ORTHO05D013349 1.6e-06 58.2 203 25.6
AUR62021797 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.8e-06 57.4 181 28.2
Dinv35899 Davidia involucrata HOM05D007544 ORTHO05D009682 3.7e-06 57.0 81 34.6


User provided reference genes

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