Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019990 Chenopodium quinoa HOM05D004501 ORTHO05D004944 0.0e+00 1815.8 923 100.0
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 0.0e+00 1658.7 970 88.8
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 0.0e+00 1433.7 972 76.9
Hund14524 Selenicereus undatus HOM05D004501 ORTHO05D004944 0.0e+00 1251.5 971 67.8
Ah.12g054390 Amaranthus hybridus HOM05D004501 ORTHO05D004944 0.0e+00 1206.0 883 71.9
Sc01g0008260 Simmondsia chinensis HOM05D004501 ORTHO05D004944 1.0e-304 1050.0 913 61.1
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 2.7e-260 902.5 962 52.9
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 9.5e-258 894.0 978 52.4
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 4.7e-257 891.7 979 52.2
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 8.0e-257 891.0 1012 51.1
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 1.0e-256 890.6 974 52.3
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 1.4e-256 890.2 978 52.9
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 2.8e-254 882.5 979 51.8
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 1.6e-252 876.7 983 52.0
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 4.5e-252 875.2 989 52.3
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 1.1e-250 870.5 961 51.3
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 1.5e-250 870.2 978 51.8
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 2.8e-249 865.9 989 52.0
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 1.0e-248 864.0 975 50.6
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 9.8e-247 857.4 996 51.5
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 9.8e-247 857.4 980 50.4
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 3.2e-245 852.4 944 52.9
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 4.1e-245 852.0 978 50.7
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 5.4e-245 851.7 936 52.6
Rhsim07G0115200 Rhododendron simsii HOM05D004501 ORTHO05D004944 7.8e-244 847.8 961 50.9
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 1.5e-242 843.6 981 49.8
Thecc.03G247200 Theobroma cacao HOM05D004501 ORTHO05D004944 1.5e-242 843.6 984 50.6
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 2.1e-241 839.7 902 52.5
GSVIVG01005813001 Vitis vinifera HOM05D004501 ORTHO05D004944 2.1e-241 839.7 810 57.7
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 5.2e-240 835.1 980 50.1
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.5e-239 833.6 1007 50.0
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 9.8e-239 830.9 960 50.5
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 9.8e-239 830.9 969 50.3
Nitab4.5_0010602g0010 Nicotiana tabacum HOM05D004501 ORTHO05D004944 1.1e-237 827.4 935 51.1
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 9.2e-237 824.3 996 49.9
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 1.6e-236 823.5 982 49.6
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 2.0e-236 823.2 973 50.2
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 6.0e-236 821.6 962 48.9
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 1.3e-235 820.5 974 49.9
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 3.0e-235 819.3 997 49.6
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 3.9e-235 818.9 994 49.8
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 5.0e-235 818.5 978 49.2
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 8.6e-235 817.8 956 49.4
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.1e-234 817.4 994 49.6
ECA240G3755 Erigeron canadensis HOM05D004501 ORTHO05D004944 2.5e-234 816.2 924 51.1
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 7.3e-234 814.7 982 48.9
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 8.1e-233 811.2 943 49.7
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 2.3e-232 809.7 976 48.2
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 3.1e-232 809.3 980 48.6
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 5.2e-232 808.5 959 49.1
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 6.8e-232 808.1 939 50.8
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 5.8e-231 805.1 976 48.3
Nn1g00910 Nelumbo nucifera HOM05D004501 ORTHO05D004944 7.5e-231 804.7 962 49.1
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 9.8e-231 804.3 976 48.4
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 1.3e-230 803.9 958 49.8
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 2.9e-230 802.7 976 48.9
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 7.1e-229 798.1 975 48.4
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 3.0e-227 792.7 998 48.1
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 1.5e-226 790.4 952 48.1
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 5.6e-226 788.5 974 47.5
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 9.5e-226 787.7 1055 46.3
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 3.6e-225 785.8 964 47.9
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 1.4e-224 783.9 968 47.9
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 1.4e-224 783.9 973 48.2
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 8.9e-224 781.2 988 48.1
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 8.9e-224 781.2 988 48.1
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 2.6e-223 779.6 1000 46.2
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 1.3e-222 777.3 974 49.0
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 2.7e-220 769.6 982 48.3
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 1.0e-219 767.7 964 47.4
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 1.3e-219 767.3 953 47.7
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 1.7e-219 766.9 935 48.3
MSTRG.12127 Avicennia marina HOM05D004501 ORTHO05D004944 3.3e-218 762.7 658 60.3
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 2.1e-217 760.0 963 47.5
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 6.2e-217 758.4 975 47.2
Hma1.2p1_1196F.1_g265990 Hydrangea macrophylla HOM05D004501 ORTHO05D004944 1.8e-216 756.9 805 53.2
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 8.9e-216 754.6 812 53.3
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 1.2e-215 754.2 951 46.9
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 1.2e-215 754.2 977 46.5
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 1.1e-213 747.7 977 47.6
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 1.1e-213 747.7 970 46.7
Actinidia02160 Actinidia chinensis HOM05D004501 ORTHO05D004944 3.2e-213 746.1 973 46.5
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 4.2e-213 745.7 964 46.6
Peaxi162Scf00346g00112 Petunia axillaris HOM05D004501 ORTHO05D004944 6.0e-212 741.9 932 48.0
BcaB02g09084 Brassica carinata HOM05D004501 ORTHO05D004944 2.3e-211 740.0 936 47.0
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 3.0e-211 739.6 966 46.5
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 7.3e-210 734.9 970 46.3
Migut.A01144 Erythranthe guttata HOM05D004501 ORTHO05D004944 3.6e-209 732.6 658 58.2
A04p30230 Brassica napus HOM05D004501 ORTHO05D004944 1.8e-208 730.3 960 46.7
SalBow6G6502 Salvia bowleyana HOM05D004501 ORTHO05D004944 6.9e-208 728.4 667 57.4
C04p67630 Brassica napus HOM05D004501 ORTHO05D004944 1.2e-207 727.6 962 46.2
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.5e-207 727.2 982 46.4
Lsat_1_v5_gn_6_93441 Lactuca sativa HOM05D004501 ORTHO05D004944 2.0e-207 726.9 967 46.4
BraA04t18485Z Brassica rapa HOM05D004501 ORTHO05D004944 3.2e-205 719.5 979 45.7
BolC4t28262H Brassica oleracea HOM05D004501 ORTHO05D004944 1.2e-204 717.6 981 45.4
TPR.G18132 Trifolium pratense HOM05D004501 ORTHO05D004944 6.0e-204 715.3 956 46.7
Nitab4.5_0001590g0040 Nicotiana tabacum HOM05D004501 ORTHO05D004944 9.6e-202 708.0 961 44.8
ATR1145G029 Amborella trichopoda HOM05D004501 ORTHO05D004944 2.1e-201 706.8 1014 44.0
BcaB01g03573 Brassica carinata HOM05D004501 ORTHO05D004944 6.9e-200 701.8 917 45.4
SGA_v2.0_scaffold104G30193 Striga asiatica HOM05D004501 ORTHO05D004944 6.2e-193 678.7 715 51.7
BcaC01g05462 Brassica carinata HOM05D004501 ORTHO05D004944 1.3e-190 671.0 765 48.8
CSS0040587 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 2.8e-185 653.3 744 50.0
C03p26410 Brassica napus HOM05D004501 ORTHO05D004944 2.1e-180 637.1 741 48.0
CDE11G0214 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 3.6e-180 636.3 671 53.9
Rhsim13G0032200 Rhododendron simsii HOM05D004501 ORTHO05D004944 2.5e-173 613.6 624 55.3
Os03g0737200 Oryza sativa ssp. japonica HOM05D004501 ORTHO05D004944 3.7e-169 599.7 663 48.7
SEGI_38311 Sequoiadendron giganteum HOM05D004501 ORTHO05D004944 3.6e-164 583.2 673 47.4
CDE02G3094 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 3.8e-158 563.1 951 41.0
DCAR_020178 Daucus carota HOM05D004501 ORTHO05D004944 1.0e-155 555.1 687 45.4
Zm00001eb056470 Zea mays HOM05D004501 ORTHO05D004944 5.7e-154 549.3 959 38.3
Dinv39174 Davidia involucrata HOM05D004501 ORTHO05D004944 6.1e-148 529.3 461 61.6
Mapoly0088s0017 Marchantia polymorpha HOM05D004501 ORTHO05D004944 4.4e-146 523.1 778 40.9
HPP92_002600 Vanilla planifolia HOM05D004501 ORTHO05D004944 3.8e-142 510.0 647 44.7
BolC3t15027H Brassica oleracea HOM05D004501 ORTHO05D004944 1.5e-141 508.1 491 53.2
CSS0032615 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 6.1e-140 502.7 719 44.4
TAR374G0010 Trochodendron aralioides HOM05D004501 ORTHO05D004944 3.5e-135 486.9 450 58.7
Zm00001eb215300 Zea mays HOM05D004501 ORTHO05D004944 3.0e-131 473.8 535 47.5
Actinidia14399 Actinidia chinensis HOM05D004501 ORTHO05D004944 6.4e-129 466.1 755 40.9
SMO356G0217 Selaginella moellendorffii HOM05D004501 ORTHO05D004944 6.4e-129 466.1 620 42.9
Pp3c10_5410 Physcomitrium patens HOM05D004501 ORTHO05D004944 1.2e-127 461.8 652 43.1
Pp3c24_4970 Physcomitrium patens HOM05D004501 ORTHO05D004944 7.3e-125 452.6 674 40.9
MD06G1054200 Malus domestica HOM05D004501 ORTHO05D004944 4.0e-115 420.2 516 48.6
AagrBONN_evm.TU.Sc2ySwM_368.3343 Anthoceros agrestis HOM05D004501 ORTHO05D004944 3.3e-101 374.0 483 42.4
unitig_0.g1052 Utricularia gibba HOM05D004501 ORTHO05D004944 1.3e-97 362.1 664 36.9
TAR374G0951 Trochodendron aralioides HOM05D004501 ORTHO05D004944 1.4e-96 358.6 546 42.3
Cpa.g.sc776.4 Carica papaya HOM05D004501 ORTHO05D004944 4.2e-96 357.1 287 64.8
CBR_g20363 Chara braunii HOM05D004501 ORTHO05D004944 4.2e-96 357.1 724 32.6
C04p07690 Brassica napus HOM05D004501 ORTHO05D004944 1.1e-93 349.0 386 51.6
HanXRQChr15g0495741 Helianthus annuus HOM05D004501 ORTHO05D004944 7.7e-66 256.5 257 54.9
MD06G1054400 Malus domestica HOM05D004501 ORTHO05D004944 1.4e-62 245.7 280 52.5
BolC4t22385H Brassica oleracea HOM05D004501 ORTHO05D004944 9.4e-56 223.0 247 45.7
CSS0028018 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 7.7e-50 203.4 193 55.4
SHI29866 Sapria himalayana HOM05D004501 ORTHO05D004944 1.5e-45 189.1 236 50.0
DCAR_020177 Daucus carota HOM05D004501 ORTHO05D004944 2.0e-45 188.7 221 50.2
CAN.G201.38 Capsicum annuum HOM05D004501 ORTHO05D004944 1.2e-42 179.5 388 34.8
CSS0011270 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 9.4e-40 169.9 184 52.2
BolC4t22386H Brassica oleracea HOM05D004501 ORTHO05D004944 1.7e-36 159.1 245 43.3
FAN04G2417 Fragaria x ananassa HOM05D004501 ORTHO05D004944 6.1e-31 140.6 135 59.3
PRCOL_00000429 Prasinoderma coloniale HOM05D004501 ORTHO05D004944 2.8e-28 131.7 541 25.7
CSS0007149 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 9.1e-27 126.7 82 75.6
Cpa.g.sc776.5 Carica papaya HOM05D004501 ORTHO05D004944 1.2e-26 126.3 107 60.7
CAN.G26.29 Capsicum annuum HOM05D004501 ORTHO05D004944 3.5e-26 124.8 199 40.7
Sed0019349 Sechium edule HOM05D004501 ORTHO05D004944 1.2e-18 99.8 96 49.0
Zm00001eb142020 Zea mays HOM05D004501 ORTHO05D004944 3.5e-18 98.2 107 46.7
Zm00001eb047720 Zea mays HOM05D004501 ORTHO05D004944 2.3e-17 95.5 62 67.7
Cpa.g.sc776.3 Carica papaya HOM05D004501 ORTHO05D004944 1.8e-14 85.9 312 30.8
CSS0048159 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 8.9e-14 83.6 48 79.2
BcaC02g12114 Brassica carinata HOM05D004501 ORTHO05D023925 2.0e-10 72.4 346 25.7
Zm00001eb333660 Zea mays HOM05D000230 ORTHO05D010966 3.3e-08 65.1 42 61.9
MCO16G596 Micromonas commoda HOM05D004501 ORTHO05D004944 1.2e-07 63.2 307 25.4