Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019423 Chenopodium quinoa HOM05D006113 ORTHO05D031674 1.2e-118 429.9 220 100.0
EL10Ac4g08179 Beta vulgaris HOM05D055373 ORTHO05D031674 8.8e-29 131.3 99 71.7
AUR62018751 Chenopodium quinoa HOM05D006113 ORTHO05D007828 7.5e-28 128.3 76 80.3
AUR62007248 Chenopodium quinoa HOM05D006113 ORTHO05D007828 1.4e-26 124.0 76 76.3
Ah.12g054610 Amaranthus hybridus HOM05D006113 ORTHO05D007828 1.3e-24 117.5 76 71.1
Dinv28932 Davidia involucrata HOM05D006113 ORTHO05D007828 2.3e-24 116.7 76 72.4
Oeu062745.2 Olea europaea HOM05D006113 ORTHO05D007828 5.0e-24 115.5 85 63.5
vmacro14161 Vaccinium macrocarpon HOM05D006113 ORTHO05D007828 5.0e-24 115.5 76 68.4
CSS0010269 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 2.5e-23 113.2 76 68.4
EL10Ac1g02288 Beta vulgaris HOM05D006113 ORTHO05D007828 5.6e-23 112.1 74 68.9
Rhsim07G0124800 Rhododendron simsii HOM05D006113 ORTHO05D007828 5.6e-23 112.1 76 67.1
CSS0019238 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 9.5e-23 111.3 76 65.8
CSS0023186 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 9.5e-23 111.3 76 65.8
Cc08_g02430 Coffea canephora HOM05D006113 ORTHO05D007828 9.5e-23 111.3 76 67.1
DCAR_008285 Daucus carota HOM05D006113 ORTHO05D007828 2.1e-22 110.2 74 68.9
Sc22g0001480 Simmondsia chinensis HOM05D006113 ORTHO05D007828 2.8e-22 109.8 77 67.5
SGA_v2.0_scaffold385G50460 Striga asiatica HOM05D006113 ORTHO05D007828 2.8e-22 109.8 76 64.5
MSTRG.12007 Avicennia marina HOM05D006113 ORTHO05D007828 3.6e-22 109.4 76 65.8
Migut.E01131 Erythranthe guttata HOM05D006113 ORTHO05D007828 2.3e-21 106.7 69 68.1
Prupe.1G552500 Prunus persica HOM05D006113 ORTHO05D007828 5.2e-21 105.5 77 66.2
Peaxi162Scf00102g00639 Petunia axillaris HOM05D006113 ORTHO05D007828 6.8e-21 105.1 74 64.9
Hund14417 Selenicereus undatus HOM05D006113 ORTHO05D007828 8.9e-21 104.8 85 57.6
SalBow1G7584 Salvia bowleyana HOM05D006113 ORTHO05D007828 1.2e-20 104.4 76 61.8
CAN.G845.35 Capsicum annuum HOM05D006113 ORTHO05D007828 3.4e-20 102.8 74 62.2
MD09G1232600 Malus domestica HOM05D006113 ORTHO05D007828 3.4e-20 102.8 85 58.8
QL12p006235 Quercus lobata HOM05D006113 ORTHO05D007828 4.4e-20 102.4 84 60.7
PGSC0003DMG400020501 Solanum tuberosum HOM05D006113 ORTHO05D007828 5.7e-20 102.1 76 61.8
Solyc08g007010.4 Solanum lycopersicum HOM05D006113 ORTHO05D007828 7.5e-20 101.7 76 60.5
GSVIVG01013180001 Vitis vinifera HOM05D006113 ORTHO05D007828 7.5e-20 101.7 69 62.3
Lsat_1_v5_gn_3_16601 Lactuca sativa HOM05D006113 ORTHO05D007828 9.8e-20 101.3 118 49.2
Sopen08g002980 Solanum pennellii HOM05D006113 ORTHO05D007828 9.8e-20 101.3 133 45.1
unitig_52.g17240 Utricularia gibba HOM05D006113 ORTHO05D007828 1.3e-19 100.9 76 59.2
Carub.0001s3091 Capsella rubella HOM05D006113 ORTHO05D007828 1.7e-19 100.5 70 65.7
AT1G32500 Arabidopsis thaliana HOM05D006113 ORTHO05D007828 2.2e-19 100.1 70 64.3
HanXRQChr06g0167341 Helianthus annuus HOM05D006113 ORTHO05D007828 2.2e-19 100.1 75 62.7
CANSAT21G0754 Cannabis sativa HOM05D006113 ORTHO05D007828 2.9e-19 99.8 70 61.4
Cfa012411 Carpinus fangiana HOM05D006113 ORTHO05D007828 2.9e-19 99.8 86 57.0
Eucgr.E00301 Eucalyptus grandis HOM05D006113 ORTHO05D007828 3.7e-19 99.4 75 62.7
FAN09G0007 Fragaria x ananassa HOM05D006113 ORTHO05D007828 3.7e-19 99.4 72 62.5
TAR371G0010 Trochodendron aralioides HOM05D006113 ORTHO05D007828 3.7e-19 99.4 77 61.0
Haze_08267 Corylus avellana HOM05D006113 ORTHO05D007828 4.9e-19 99.0 128 46.1
Lj2g0019507 Lotus japonicus HOM05D006113 ORTHO05D007828 8.3e-19 98.2 86 54.7
RcHm_v2.0_Chr6g0269051 Rosa chinensis HOM05D006113 ORTHO05D007828 8.3e-19 98.2 77 59.7
AL1G46750 Arabidopsis lyrata HOM05D006113 ORTHO05D007828 1.1e-18 97.8 70 64.3
Aa31LG2G13450 Aethionema arabicum HOM05D006113 ORTHO05D007828 1.4e-18 97.4 70 62.9
FAN02G2000 Fragaria x ananassa HOM05D006113 ORTHO05D007828 1.4e-18 97.4 72 61.1
FvH4_6g31710 Fragaria vesca HOM05D006113 ORTHO05D007828 1.8e-18 97.1 72 61.1
FAN05G0306 Fragaria x ananassa HOM05D006113 ORTHO05D007828 2.4e-18 96.7 72 61.1
CARHR031950 Cardamine hirsuta HOM05D006113 ORTHO05D007828 4.1e-18 95.9 70 62.9
ECA246G3200 Erigeron canadensis HOM05D006113 ORTHO05D007828 4.1e-18 95.9 118 47.5
Nitab4.5_0000535g0010 Nicotiana tabacum HOM05D006113 ORTHO05D007828 4.1e-18 95.9 127 44.1
THA.LOC104814434 Tarenaya hassleriana HOM05D006113 ORTHO05D007828 4.1e-18 95.9 71 62.0
THA.LOC104807962 Tarenaya hassleriana HOM05D006113 ORTHO05D007828 5.4e-18 95.5 70 62.9
MBI18_g17018_MAGBIO Magnolia biondii HOM05D006113 ORTHO05D007828 7.0e-18 95.1 60 65.0
Sp1g28400 Schrenkiella parvula HOM05D006113 ORTHO05D007828 7.0e-18 95.1 70 61.4
Duzib205G1867 Durio zibethinus HOM05D006113 ORTHO05D007828 9.2e-18 94.7 77 55.8
Thecc.03G231000 Theobroma cacao HOM05D006113 ORTHO05D007828 9.2e-18 94.7 77 55.8
Ciclev10031360m.g Citrus clementina HOM05D006113 ORTHO05D007828 1.2e-17 94.4 72 56.9
CsaV3_3G049370 Cucumis sativus L. HOM05D006113 ORTHO05D007828 1.6e-17 94.0 70 61.4
BcaC05g27850 Brassica carinata HOM05D006113 ORTHO05D007828 2.0e-17 93.6 72 59.7
A05p24790 Brassica napus HOM05D006113 ORTHO05D007828 2.0e-17 93.6 70 61.4
C05p38480 Brassica napus HOM05D006113 ORTHO05D007828 2.0e-17 93.6 72 59.7
BolC5t32582H Brassica oleracea HOM05D006113 ORTHO05D007828 2.0e-17 93.6 72 59.7
BraA05t21362Z Brassica rapa HOM05D006113 ORTHO05D007828 2.0e-17 93.6 70 61.4
ClCG09G012180 Citrullus lanatus HOM05D006113 ORTHO05D007828 2.0e-17 93.6 70 61.4
MELO3C003389.2 Cucumis melo HOM05D006113 ORTHO05D007828 2.0e-17 93.6 70 61.4
Nitab4.5_0000804g0060 Nicotiana tabacum HOM05D006113 ORTHO05D007828 2.0e-17 93.6 127 44.1
Atru.chr6.1754 Acer truncatum HOM05D006113 ORTHO05D007828 3.5e-17 92.8 71 59.2
TWI81G0082 Tripterygium wilfordii HOM05D006113 ORTHO05D007828 3.5e-17 92.8 70 55.7
Aqoxy3G00478 Aquilegia oxysepala HOM05D006113 ORTHO05D007828 4.6e-17 92.4 75 58.7
BcaB03g13726 Brassica carinata HOM05D006113 ORTHO05D007828 4.6e-17 92.4 70 61.4
COL.COLO4_17073 Corchorus olitorius HOM05D006113 ORTHO05D007828 4.6e-17 92.4 77 55.8
Gohir.D08G178600 Gossypium hirsutum HOM05D006113 ORTHO05D007828 5.9e-17 92.0 77 53.2
Gorai.004G186900 Gossypium raimondii HOM05D006113 ORTHO05D007828 5.9e-17 92.0 77 53.2
HanXRQChr17g0535731 Helianthus annuus HOM05D006113 ORTHO05D007828 5.9e-17 92.0 75 60.0
Thhalv10007401m.g Eutrema salsugineum HOM05D006113 ORTHO05D007828 7.8e-17 91.7 70 60.0
Nn3g17324 Nelumbo nucifera HOM05D006113 ORTHO05D007828 7.8e-17 91.7 77 54.5
TWI60G1370 Tripterygium wilfordii HOM05D006113 ORTHO05D007828 7.8e-17 91.7 70 55.7
Psat2g173560 Pisum sativum HOM05D006113 ORTHO05D007828 1.0e-16 91.3 75 58.7
Cpa.g.sc90.55 Carica papaya HOM05D006113 ORTHO05D007828 1.3e-16 90.9 70 54.3
CiPaw.11G091200 Carya illinoinensis HOM05D006113 ORTHO05D007828 1.3e-16 90.9 75 56.0
PGR042G1735 Punica granatum HOM05D006113 ORTHO05D007828 1.7e-16 90.5 70 57.1
Gohir.A08G158300 Gossypium hirsutum HOM05D006113 ORTHO05D007828 2.3e-16 90.1 77 53.2
Ca_24644_v3 Cicer arietinum L. HOM05D006113 ORTHO05D007828 6.6e-16 88.6 76 60.5
Sed0027774 Sechium edule HOM05D006113 ORTHO05D007828 1.1e-15 87.8 70 58.6
PSO478G3605 Papaver somniferum HOM05D006113 ORTHO05D007828 1.5e-15 87.4 75 56.0
Medtr5g014290 Medicago truncatula HOM05D006113 ORTHO05D007828 1.9e-15 87.0 75 57.3
PSO017G4443 Papaver somniferum HOM05D006113 ORTHO05D007828 2.5e-15 86.7 74 56.8
Lj8A291G57 Lonicera japonica HOM05D006113 ORTHO05D007828 7.3e-15 85.1 74 56.8
PSO478G2563 Papaver somniferum HOM05D006113 ORTHO05D007828 1.6e-14 84.0 75 53.3
Sabra01G0112900 Salix brachista HOM05D006113 ORTHO05D007828 2.1e-14 83.6 74 51.4
Manes.05G117026 Manihot esculenta HOM05D006113 ORTHO05D007828 2.8e-14 83.2 59 57.6
TPR.G17447 Trifolium pratense HOM05D006113 ORTHO05D007828 2.8e-14 83.2 75 56.0
arahy.Tifrunner.gnm1.ann1.C9Y7N1 Arachis hypogaea HOM05D006113 ORTHO05D007828 4.7e-14 82.4 81 46.9
arahy.Tifrunner.gnm1.ann1.LSM77P Arachis hypogaea HOM05D006113 ORTHO05D007828 4.7e-14 82.4 81 46.9
Lalb_Chr05g0214021 Lupinus albus HOM05D006113 ORTHO05D007828 8.0e-14 81.6 75 50.7
Potri.001G144500 Populus trichocarpa HOM05D006113 ORTHO05D007828 8.0e-14 81.6 74 50.0
Potri.003G089700 Populus trichocarpa HOM05D006113 ORTHO05D007828 8.0e-14 81.6 74 50.0
HPP92_003349 Vanilla planifolia HOM05D006113 ORTHO05D007828 8.9e-13 78.2 63 57.1
Glyma.11G042400 Glycine max HOM05D006113 ORTHO05D007828 2.4e-10 70.1 74 45.9
BcaC05g27849 Brassica carinata HOM05D006113 ORTHO05D007828 3.2e-10 69.7 54 55.6
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 4.1e-10 69.3 46 80.4
Glyma.01G199500 Glycine max HOM05D006113 ORTHO05D007828 4.1e-10 69.3 59 47.5
Phvul.002G006200 Phaseolus vulgaris HOM05D006113 ORTHO05D007828 3.5e-09 66.2 71 43.7
SEGI_13135 Sequoiadendron giganteum HOM05D006113 ORTHO05D007828 4.6e-09 65.9 58 55.2
VMungo1215G1026 Vigna mungo HOM05D006113 ORTHO05D007828 1.1e-07 61.2 61 42.6


User provided reference genes

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