Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62019383 Chenopodium quinoa HOM05D007280 ORTHO05D009108 1.9e-225 786.2 616 100.0
AUR62006107 Chenopodium quinoa HOM05D007280 ORTHO05D009108 4.7e-213 745.0 616 96.6
Ah.13g070140 Amaranthus hybridus HOM05D007280 ORTHO05D009108 1.6e-115 421.0 366 58.5
Ah.07g205740 Amaranthus hybridus HOM05D007280 ORTHO05D009108 5.6e-97 359.4 346 56.1
Potri.010G098700 Populus trichocarpa HOM05D007280 ORTHO05D009108 4.5e-78 296.6 581 53.0
Cpa.g.sc2.97 Carica papaya HOM05D007280 ORTHO05D009108 1.7e-77 294.7 568 54.6
Sabra08G0108200 Salix brachista HOM05D007280 ORTHO05D009108 1.8e-74 284.6 560 54.3
Cfa015100 Carpinus fangiana HOM05D007280 ORTHO05D009108 1.9e-73 281.2 562 55.5
Hma1.2p1_0319F.1_g123900 Hydrangea macrophylla HOM05D007280 ORTHO05D009108 4.6e-67 260.0 347 42.1
Haze_01575 Corylus avellana HOM05D007280 ORTHO05D009108 1.0e-66 258.8 558 53.2
Solyc04g008570.4 Solanum lycopersicum HOM05D007280 ORTHO05D009108 1.0e-66 258.8 351 40.7
Nn4g24834 Nelumbo nucifera HOM05D007280 ORTHO05D009108 2.3e-66 257.7 333 42.0
PGSC0003DMG400031369 Solanum tuberosum HOM05D007280 ORTHO05D009108 3.9e-66 256.9 351 40.5
Lj2g0005518 Lotus japonicus HOM05D007280 ORTHO05D009108 8.7e-66 255.8 338 41.1
Peaxi162Scf00329g00097 Petunia axillaris HOM05D007280 ORTHO05D009108 1.5e-65 255.0 291 44.3
Sopen04g003730 Solanum pennellii HOM05D007280 ORTHO05D009108 1.5e-65 255.0 351 40.2
Thecc.09G239200 Theobroma cacao HOM05D007280 ORTHO05D009108 1.5e-65 255.0 354 41.5
CAN.G458.1 Capsicum annuum HOM05D007280 ORTHO05D009108 4.3e-65 253.4 364 40.7
Lj3P855T51 Lonicera japonica HOM05D007280 ORTHO05D009108 9.6e-65 252.3 337 41.5
Cc11_g02870 Coffea canephora HOM05D007280 ORTHO05D009108 1.6e-64 251.5 338 45.0
Glyma.20G010600 Glycine max HOM05D007280 ORTHO05D009108 1.1e-63 248.8 563 49.7
TWI74G1184 Tripterygium wilfordii HOM05D007280 ORTHO05D009108 2.4e-63 247.7 320 40.3
FAN12G0470 Fragaria x ananassa HOM05D007280 ORTHO05D009108 9.0e-63 245.7 348 40.8
Prupe.1G342100 Prunus persica HOM05D007280 ORTHO05D009108 9.0e-63 245.7 331 41.7
SalBow3G1417 Salvia bowleyana HOM05D007280 ORTHO05D009108 1.2e-62 245.4 583 56.9
FAN07G2371 Fragaria x ananassa HOM05D007280 ORTHO05D009108 3.4e-62 243.8 331 41.4
Ca_12458_v3 Cicer arietinum L. HOM05D007280 ORTHO05D009108 4.5e-62 243.4 351 39.0
Medtr1g033840 Medicago truncatula HOM05D007280 ORTHO05D009108 1.0e-61 242.3 371 38.5
VMungo1215G2162 Vigna mungo HOM05D007280 ORTHO05D009108 1.0e-61 242.3 336 39.0
FvH4_4g36140 Fragaria vesca HOM05D007280 ORTHO05D009108 1.3e-61 241.9 348 40.8
DCAR_023520 Daucus carota HOM05D007280 ORTHO05D009108 1.7e-61 241.5 347 39.5
CSS0013384 Camellia sinensis var. sinensis HOM05D007280 ORTHO05D009108 3.8e-61 240.4 358 40.2
Lalb_Chr17g0338341 Lupinus albus HOM05D007280 ORTHO05D009108 4.9e-61 240.0 341 40.8
HanXRQChr16g0526501 Helianthus annuus HOM05D007280 ORTHO05D009108 8.4e-61 239.2 374 38.2
Phvul.003G013000 Phaseolus vulgaris HOM05D007280 ORTHO05D009108 1.1e-60 238.8 336 39.0
THA.LOC104819105 Tarenaya hassleriana HOM05D007280 ORTHO05D009108 3.2e-60 237.3 351 37.6
Psat6g095680 Pisum sativum HOM05D007280 ORTHO05D009108 1.2e-59 235.3 338 39.6
MD16G1008400 Malus domestica HOM05D007280 ORTHO05D009108 7.9e-59 232.6 293 42.7
MSTRG.17728 Avicennia marina HOM05D007280 ORTHO05D009108 2.3e-58 231.1 336 39.6
Eucgr.B02618 Eucalyptus grandis HOM05D007280 ORTHO05D009108 2.3e-58 231.1 325 41.8
Sabra10G0071200 Salix brachista HOM05D007280 ORTHO05D009108 5.1e-58 229.9 581 49.6
Rhsim04G0168900 Rhododendron simsii HOM05D007280 ORTHO05D009108 6.7e-58 229.6 379 38.5
Aa31sc65G20 Aethionema arabicum HOM05D007280 ORTHO05D009108 3.3e-57 227.3 305 40.0
ECA246G2688 Erigeron canadensis HOM05D007280 ORTHO05D009108 4.3e-57 226.9 291 47.8
Ciclev10004581m.g Citrus clementina HOM05D007280 ORTHO05D009108 1.6e-56 224.9 349 39.5
MD13G1010900 Malus domestica HOM05D007280 ORTHO05D009108 2.8e-56 224.2 315 40.6
TPR.G35854 Trifolium pratense HOM05D007280 ORTHO05D009108 6.3e-56 223.0 337 37.7
Sabra08G0108600 Salix brachista HOM05D007280 ORTHO05D009108 2.4e-55 221.1 344 38.1
Lsat_1_v5_gn_3_27640 Lactuca sativa HOM05D007280 ORTHO05D009108 5.3e-55 219.9 326 45.4
PGR044G2110 Punica granatum HOM05D007280 ORTHO05D009108 3.2e-52 210.7 343 39.1
A02p02170 Brassica napus HOM05D007280 ORTHO05D009108 9.3e-52 209.1 287 38.7
Sp6g30250 Schrenkiella parvula HOM05D007280 ORTHO05D009108 9.3e-52 209.1 345 36.8
Thhalv10016019m.g Eutrema salsugineum HOM05D007280 ORTHO05D009108 1.6e-51 208.4 346 36.7
BraA02t05191Z Brassica rapa HOM05D007280 ORTHO05D009108 2.1e-51 208.0 287 38.3
C02p06420 Brassica napus HOM05D007280 ORTHO05D009108 3.9e-50 203.8 288 37.8
BolC2t06588H Brassica oleracea HOM05D007280 ORTHO05D009108 3.9e-50 203.8 288 37.8
AT5G13770 Arabidopsis thaliana HOM05D007280 ORTHO05D009108 8.7e-50 202.6 343 35.3
AL6G24390 Arabidopsis lyrata HOM05D007280 ORTHO05D009108 1.9e-49 201.4 343 35.0
Carub.0006s1195 Capsella rubella HOM05D007280 ORTHO05D009108 1.9e-49 201.4 344 35.8
Manes.17G093400 Manihot esculenta HOM05D007280 ORTHO05D009108 4.8e-48 196.8 291 38.8
Glyma.07G177100 Glycine max HOM05D007280 ORTHO05D009108 6.3e-48 196.4 287 38.7
CDE08G0845 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 2.0e-46 191.4 339 35.4
QL03p041451 Quercus lobata HOM05D007280 ORTHO05D009108 7.7e-46 189.5 267 40.4
ATR0705G126 Amborella trichopoda HOM05D007280 ORTHO05D009108 2.9e-45 187.6 325 35.7
BcaNung04186 Brassica carinata HOM05D007280 ORTHO05D009108 2.9e-45 187.6 288 36.1
Gohir.D09G108900 Gossypium hirsutum HOM05D007280 ORTHO05D009108 8.5e-45 186.0 352 35.2
Os04g0583101 Oryza sativa ssp. japonica HOM05D007280 ORTHO05D009108 8.5e-45 186.0 519 45.7
Gohir.A09G112200 Gossypium hirsutum HOM05D007280 ORTHO05D009108 1.1e-44 185.7 291 37.5
Gohir.D06G095050 Gossypium hirsutum HOM05D007280 ORTHO05D009108 1.4e-44 185.3 358 34.4
Gorai.006G126500 Gossypium raimondii HOM05D007280 ORTHO05D009108 2.5e-44 184.5 352 34.9
Potri.008G142900 Populus trichocarpa HOM05D007280 ORTHO05D009108 2.5e-44 184.5 271 38.0
MELO3C027064.2 Cucumis melo HOM05D007280 ORTHO05D009108 9.4e-44 182.6 282 38.3
Duzib168G0083 Durio zibethinus HOM05D007280 ORTHO05D009108 2.3e-42 177.9 356 34.0
CsaV3_5G017390 Cucumis sativus L. HOM05D007280 ORTHO05D009108 3.9e-42 177.2 321 36.4
Sc14g0006690 Simmondsia chinensis HOM05D007280 ORTHO05D009108 3.9e-42 177.2 231 40.3
Zm00001eb072910 Zea mays HOM05D007280 ORTHO05D009108 3.9e-42 177.2 594 40.4
TAR622G0173 Trochodendron aralioides HOM05D007280 ORTHO05D009108 1.5e-41 175.3 283 36.7
Sed0008466 Sechium edule HOM05D007280 ORTHO05D009108 5.7e-41 173.3 296 36.5
PSO782G1316 Papaver somniferum HOM05D007280 ORTHO05D009108 1.7e-40 171.8 273 37.0
ClCG01G006970 Citrullus lanatus HOM05D007280 ORTHO05D009108 3.7e-40 170.6 276 37.0
Migut.N02514 Erythranthe guttata HOM05D007280 ORTHO05D009108 1.1e-39 169.1 267 37.1
Oeu006355.1 Olea europaea HOM05D007280 ORTHO05D009108 1.8e-39 168.3 272 37.5
Lsat_1_v5_gn_4_26101 Lactuca sativa HOM05D007280 ORTHO05D009108 2.0e-38 164.9 243 36.6
PSO063G1027 Papaver somniferum HOM05D007280 ORTHO05D009108 1.0e-37 162.5 237 37.6
Dinv17118 Davidia involucrata HOM05D007280 ORTHO05D009108 1.4e-36 158.7 227 40.1
CDE04G3512 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 5.5e-36 156.8 341 33.4
Nitab4.5_0000129g0410 Nicotiana tabacum HOM05D007280 ORTHO05D009108 1.0e-34 152.5 391 54.2
MBI03_g37599_MAGBIO Magnolia biondii HOM05D007280 ORTHO05D009108 1.7e-32 145.2 336 29.8
GSVIVG01010259001 Vitis vinifera HOM05D007280 ORTHO05D009108 8.2e-32 142.9 311 28.6
CARHR199670 Cardamine hirsuta HOM05D007280 ORTHO05D009108 1.0e-29 136.0 297 30.6
Aqoxy3G04194 Aquilegia oxysepala HOM05D007280 ORTHO05D009108 1.7e-29 135.2 268 34.0
QL11p025101 Quercus lobata HOM05D007280 ORTHO05D009108 9.4e-28 129.4 108 58.3
CiPaw.05G161600 Carya illinoinensis HOM05D007280 ORTHO05D009108 2.3e-26 124.8 282 31.9
COL.COLO4_36459 Corchorus olitorius HOM05D007280 ORTHO05D009108 3.0e-26 124.4 302 32.8
Ciclev10006779m.g Citrus clementina HOM05D007280 ORTHO05D009108 1.2e-25 122.5 340 54.4
RcHm_v2.0_Chr4g0445881 Rosa chinensis HOM05D007280 ORTHO05D009108 2.0e-25 121.7 347 28.8
Nitab4.5_0003882g0050 Nicotiana tabacum HOM05D007280 ORTHO05D009108 1.4e-23 115.5 158 43.0
GSVIVG01032336001 Vitis vinifera HOM05D007280 ORTHO05D009108 1.8e-23 115.2 255 28.2
FAN22G2182 Fragaria x ananassa HOM05D007280 ORTHO05D009108 6.8e-18 96.7 70 65.7
ECA234G4111 Erigeron canadensis HOM05D007280 ORTHO05D009108 4.4e-17 94.0 84 54.8
MBI03_g37600_MAGBIO Magnolia biondii HOM05D007280 ORTHO05D009108 2.8e-16 91.3 61 68.9
QL11p025168 Quercus lobata HOM05D007280 ORTHO05D009108 9.1e-15 86.3 87 48.3
SEGI_25718 Sequoiadendron giganteum HOM05D007280 ORTHO05D009108 1.5e-12 79.0 137 30.7


User provided reference genes

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