Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 7.7e-166 587.0 287 100.0
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 5.0e-157 557.8 294 93.9
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 3.5e-150 535.0 299 86.6
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 3.8e-141 505.0 296 82.4
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.1e-140 503.4 296 82.4
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.5e-140 503.1 299 84.3
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.5e-140 503.1 296 81.8
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 4.2e-140 501.5 300 80.3
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 4.7e-139 498.0 296 81.8
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 8.0e-139 497.3 296 80.7
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 1.0e-138 496.9 298 79.2
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 1.0e-138 496.9 296 80.4
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 1.0e-138 496.9 296 81.8
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 4.0e-138 495.0 296 79.7
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.5e-137 493.0 298 80.5
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 1.5e-137 493.0 299 80.9
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 4.4e-137 491.5 296 79.1
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 4.4e-137 491.5 295 80.0
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 5.7e-137 491.1 300 79.0
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 7.5e-137 490.7 296 79.1
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 7.5e-137 490.7 296 78.7
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 1.3e-136 490.0 300 80.0
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 2.8e-136 488.8 297 79.8
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 3.7e-136 488.4 296 79.1
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 8.3e-136 487.3 296 78.7
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 1.8e-135 486.1 295 79.0
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 1.8e-135 486.1 300 79.3
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 3.1e-135 485.3 295 78.3
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 3.1e-135 485.3 300 79.0
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 4.1e-135 485.0 286 80.8
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 5.4e-135 484.6 296 77.0
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 7.0e-135 484.2 295 78.0
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 7.0e-135 484.2 286 80.4
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 7.0e-135 484.2 286 80.4
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 9.2e-135 483.8 300 77.7
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 1.2e-134 483.4 296 76.7
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 1.2e-134 483.4 300 79.0
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 1.6e-134 483.0 295 78.0
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.0e-134 482.6 295 78.3
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 2.7e-134 482.3 295 78.6
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 3.5e-134 481.9 296 79.1
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 4.5e-134 481.5 295 78.0
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 5.9e-134 481.1 292 78.4
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.0e-133 480.3 295 78.0
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 1.7e-133 479.6 312 75.3
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 2.3e-133 479.2 295 78.3
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 5.0e-133 478.0 295 78.0
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.1e-132 476.9 313 73.2
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 1.5e-132 476.5 295 77.3
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 1.5e-132 476.5 296 78.4
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 3.3e-132 475.3 298 76.8
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 9.5e-132 473.8 315 74.0
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.2e-131 473.4 301 76.4
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 3.6e-131 471.9 295 75.9
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 5.2e-130 468.0 293 74.1
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 6.8e-130 467.6 296 75.3
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 1.5e-129 466.5 318 73.6
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 2.6e-129 465.7 298 73.2
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 3.4e-129 465.3 293 74.4
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 3.4e-129 465.3 293 74.4
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.3e-128 463.4 293 73.0
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 2.2e-128 462.6 293 73.0
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 2.2e-128 462.6 295 72.9
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 2.9e-128 462.2 293 73.7
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 3.7e-128 461.8 292 75.7
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 8.3e-128 460.7 297 73.7
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 1.1e-127 460.3 293 72.7
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.1e-127 460.3 270 80.7
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 1.4e-127 459.9 293 73.4
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 1.4e-127 459.9 293 73.4
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 3.5e-126 455.3 293 73.7
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 1.3e-125 453.4 293 72.0
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 2.3e-125 452.6 286 74.1
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 5.0e-125 451.4 290 73.1
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 1.1e-124 450.3 318 67.6
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.5e-124 449.9 292 71.9
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 1.5e-124 449.9 346 63.9
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 4.3e-124 448.4 297 70.7
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 7.3e-124 447.6 294 71.8
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 2.1e-123 446.0 336 67.6
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 4.7e-123 444.9 298 68.8
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 6.2e-123 444.5 299 69.9
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 2.3e-122 442.6 298 67.8
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 5.8e-121 438.0 287 73.2
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 4.9e-120 434.9 290 72.4
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 6.4e-120 434.5 293 68.3
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 5.4e-119 431.4 257 80.5
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 6.0e-118 427.9 289 69.6
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 2.5e-116 422.5 297 68.4
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 6.2e-115 417.9 296 70.3
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 1.4e-114 416.8 266 74.1
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 2.7e-110 402.5 295 69.8
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 6.6e-109 397.9 290 67.2
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 4.4e-97 358.6 296 59.8
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 7.6e-97 357.8 221 75.1
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 2.1e-94 349.7 286 60.5
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 4.8e-91 338.6 291 59.5
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 8.1e-91 337.8 199 80.9
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 5.3e-90 335.1 284 58.1
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.0e-85 320.9 204 75.0
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 5.5e-79 298.5 182 74.2
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 3.9e-77 292.4 199 70.9
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 1.3e-67 260.8 237 54.4
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.4e-66 256.5 167 75.4
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 6.1e-62 241.9 137 82.5
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 5.1e-61 238.8 144 75.7
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 2.3e-53 213.4 206 56.3
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.4e-50 204.1 139 74.1
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 3.8e-40 169.5 111 73.0
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 8.0e-38 161.8 102 74.5
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.6e-28 130.2 85 76.5
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 9.8e-28 128.3 78 76.9
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.8e-27 126.7 111 58.6
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 4.1e-26 122.9 73 78.1
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 6.6e-24 115.5 301 26.9
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 2.8e-22 110.2 324 27.5
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 2.3e-21 107.1 328 25.0
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.7e-19 100.9 60 81.7
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 3.4e-12 76.6 41 87.8


User provided reference genes

Program Settings