Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62017329 Chenopodium quinoa HOM05D004437 ORTHO05D005401 1.6e-88 329.3 162 100.0
AUR62010560 Chenopodium quinoa HOM05D004437 ORTHO05D005401 1.8e-55 219.5 115 93.0
Hund14703 Selenicereus undatus HOM05D004437 ORTHO05D005401 5.3e-55 218.0 120 90.8
Duzib138G0705 Durio zibethinus HOM05D004437 ORTHO05D005401 9.0e-55 217.2 152 73.0
Gohir.A11G083500 Gossypium hirsutum HOM05D004437 ORTHO05D005401 1.3e-53 213.4 152 72.4
Gorai.007G093600 Gossypium raimondii HOM05D004437 ORTHO05D005401 1.3e-53 213.4 152 72.4
Duzib133G0135 Durio zibethinus HOM05D004437 ORTHO05D005401 5.0e-53 211.5 152 72.4
Gohir.D11G087600 Gossypium hirsutum HOM05D004437 ORTHO05D005401 6.5e-53 211.1 152 71.7
TAR374G0190 Trochodendron aralioides HOM05D004437 ORTHO05D005401 1.4e-52 209.9 153 74.5
Nn1g01279 Nelumbo nucifera HOM05D004437 ORTHO05D005401 3.2e-52 208.8 146 74.7
Thecc.01G371500 Theobroma cacao HOM05D004437 ORTHO05D005401 7.2e-52 207.6 152 70.4
CsaV3_3G003440 Cucumis sativus L. HOM05D004437 ORTHO05D005401 4.6e-51 204.9 156 70.5
MELO3C014010.2 Cucumis melo HOM05D004437 ORTHO05D005401 7.9e-51 204.1 156 69.9
TWI23G1180 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 1.8e-50 203.0 152 71.1
Ah.12g057860 Amaranthus hybridus HOM05D004437 ORTHO05D005401 3.0e-50 202.2 145 77.2
Eucgr.E01334 Eucalyptus grandis HOM05D004437 ORTHO05D005401 5.1e-50 201.4 123 78.9
GSVIVG01027575001 Vitis vinifera HOM05D004437 ORTHO05D005401 5.1e-50 201.4 152 69.7
CDE06G2826 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 1.1e-49 200.3 142 74.6
PGR042G1009 Punica granatum HOM05D004437 ORTHO05D005401 1.1e-49 200.3 148 70.3
TWI14G0837 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 1.9e-49 199.5 154 70.1
Sc22g0000410 Simmondsia chinensis HOM05D004437 ORTHO05D005401 3.3e-49 198.7 153 68.6
ATR0661G478 Amborella trichopoda HOM05D004437 ORTHO05D005401 5.7e-49 198.0 145 72.4
Sed0010224 Sechium edule HOM05D004437 ORTHO05D005401 7.4e-49 197.6 152 67.1
Ciclev10022649m.g Citrus clementina HOM05D004437 ORTHO05D005401 1.6e-48 196.4 152 68.4
CiPaw.01G258300 Carya illinoinensis HOM05D004437 ORTHO05D005401 2.2e-48 196.1 152 68.4
CiPaw.12G100900 Carya illinoinensis HOM05D004437 ORTHO05D005401 2.2e-48 196.1 148 69.6
Lj3g0004540 Lotus japonicus HOM05D004437 ORTHO05D005401 2.8e-48 195.7 147 71.4
C04p06550 Brassica napus HOM05D004437 ORTHO05D005401 4.8e-48 194.9 145 68.3
BolC4t22280H Brassica oleracea HOM05D004437 ORTHO05D005401 4.8e-48 194.9 145 68.3
QL08p051220 Quercus lobata HOM05D004437 ORTHO05D005401 6.3e-48 194.5 152 68.4
Manes.01G263900 Manihot esculenta HOM05D004437 ORTHO05D005401 1.1e-47 193.7 152 69.1
Ca_23785_v3 Cicer arietinum L. HOM05D004437 ORTHO05D005401 1.4e-47 193.4 145 69.7
Nitab4.5_0007346g0070 Nicotiana tabacum HOM05D004437 ORTHO05D005401 1.4e-47 193.4 145 71.7
Manes.05G042100 Manihot esculenta HOM05D004437 ORTHO05D005401 1.8e-47 193.0 152 69.1
Sp4g27680 Schrenkiella parvula HOM05D004437 ORTHO05D005401 2.4e-47 192.6 145 67.6
Dinv43738 Davidia involucrata HOM05D004437 ORTHO05D005401 3.1e-47 192.2 149 70.5
FvH4_5g01190 Fragaria vesca HOM05D004437 ORTHO05D005401 3.1e-47 192.2 154 68.2
A05p05600 Brassica napus HOM05D004437 ORTHO05D005401 6.9e-47 191.0 145 67.6
FAN04G1903 Fragaria x ananassa HOM05D004437 ORTHO05D005401 6.9e-47 191.0 154 67.5
Solyc05g047690.3 Solanum lycopersicum HOM05D004437 ORTHO05D005401 6.9e-47 191.0 145 71.7
Sopen05g027940 Solanum pennellii HOM05D004437 ORTHO05D005401 6.9e-47 191.0 145 71.7
TAR629G1686 Trochodendron aralioides HOM05D004437 ORTHO05D005401 6.9e-47 191.0 121 76.9
Atru.chr9.1501 Acer truncatum HOM05D004437 ORTHO05D005401 9.0e-47 190.7 143 69.2
Aqoxy5G03951 Aquilegia oxysepala HOM05D004437 ORTHO05D005401 9.0e-47 190.7 141 70.9
BcaB02g09022 Brassica carinata HOM05D004437 ORTHO05D005401 9.0e-47 190.7 145 66.9
Psat4g150640 Pisum sativum HOM05D004437 ORTHO05D005401 9.0e-47 190.7 145 69.0
RcHm_v2.0_Chr1g0351651 Rosa chinensis HOM05D004437 ORTHO05D005401 9.0e-47 190.7 132 73.5
PGSC0003DMG400013695 Solanum tuberosum HOM05D004437 ORTHO05D005401 9.0e-47 190.7 145 71.7
Atru.chr5.365 Acer truncatum HOM05D004437 ORTHO05D005401 1.2e-46 190.3 152 65.8
Dinv32406 Davidia involucrata HOM05D004437 ORTHO05D005401 1.2e-46 190.3 150 68.7
Actinidia09575 Actinidia chinensis HOM05D004437 ORTHO05D005401 2.0e-46 189.5 152 68.4
Lalb_Chr10g0097651 Lupinus albus HOM05D004437 ORTHO05D005401 2.0e-46 189.5 144 70.8
Lsat_1_v5_gn_7_6120 Lactuca sativa HOM05D004437 ORTHO05D005401 3.4e-46 188.7 155 67.1
Haze_08988 Corylus avellana HOM05D004437 ORTHO05D005401 4.5e-46 188.3 157 65.6
Cfa012070 Carpinus fangiana HOM05D004437 ORTHO05D005401 5.9e-46 188.0 158 65.2
Peaxi162Scf00988g00110 Petunia axillaris HOM05D004437 ORTHO05D005401 5.9e-46 188.0 145 69.7
THA.LOC104802003 Tarenaya hassleriana HOM05D004437 ORTHO05D005401 5.9e-46 188.0 123 73.2
CANSAT21G0327 Cannabis sativa HOM05D004437 ORTHO05D005401 7.7e-46 187.6 117 78.6
Carub.0004s2829 Capsella rubella HOM05D004437 ORTHO05D005401 7.7e-46 187.6 145 66.9
Migut.C00761 Erythranthe guttata HOM05D004437 ORTHO05D005401 7.7e-46 187.6 149 67.1
CAN.G1608.2 Capsicum annuum HOM05D004437 ORTHO05D005401 1.0e-45 187.2 146 70.5
HanXRQChr06g0169271 Helianthus annuus HOM05D004437 ORTHO05D005401 1.3e-45 186.8 146 68.5
Os02g0122000 Oryza sativa ssp. japonica HOM05D004437 ORTHO05D005401 1.7e-45 186.4 152 67.1
Thhalv10001671m.g Eutrema salsugineum HOM05D004437 ORTHO05D005401 2.2e-45 186.0 145 65.5
BraA05t19533Z Brassica rapa HOM05D004437 ORTHO05D005401 2.9e-45 185.7 123 71.5
FAN13G0465 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.9e-45 185.7 160 65.6
Hma1.2p1_0033F.1_g020790 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 2.9e-45 185.7 159 63.5
AL4G44810 Arabidopsis lyrata HOM05D004437 ORTHO05D005401 3.8e-45 185.3 145 64.8
Medtr8g033340 Medicago truncatula HOM05D004437 ORTHO05D005401 3.8e-45 185.3 147 66.7
Phvul.010G087700 Phaseolus vulgaris HOM05D004437 ORTHO05D005401 3.8e-45 185.3 145 68.3
VMungo0331G2039 Vigna mungo HOM05D004437 ORTHO05D005401 3.8e-45 185.3 145 68.3
FAN08G0331 Fragaria x ananassa HOM05D004437 ORTHO05D005401 5.0e-45 184.9 153 66.7
Prupe.2G150900 Prunus persica HOM05D004437 ORTHO05D005401 5.0e-45 184.9 123 74.8
CsaV3_3G009410 Cucumis sativus L. HOM05D004437 ORTHO05D005401 8.5e-45 184.1 137 68.6
CARHR140860 Cardamine hirsuta HOM05D004437 ORTHO05D005401 1.1e-44 183.7 145 65.5
MD02G1197700 Malus domestica HOM05D004437 ORTHO05D005401 1.1e-44 183.7 133 72.2
SGA_v2.0_scaffold201G41379 Striga asiatica HOM05D000186 ORTHO05D001124 1.1e-44 183.7 116 77.6
MELO3C006160.2 Cucumis melo HOM05D004437 ORTHO05D005401 1.9e-44 183.0 121 74.4
Glyma.03G019600 Glycine max HOM05D004437 ORTHO05D005401 1.9e-44 183.0 145 67.6
Potri.002G151500 Populus trichocarpa HOM05D004437 ORTHO05D005401 1.9e-44 183.0 152 64.5
RcHm_v2.0_Chr7g0199901 Rosa chinensis HOM05D004437 ORTHO05D005401 2.5e-44 182.6 151 66.9
SalBow7G1560 Salvia bowleyana HOM05D004437 ORTHO05D005401 3.2e-44 182.2 146 65.8
AT2G45640 Arabidopsis thaliana HOM05D004437 ORTHO05D005401 4.2e-44 181.8 145 64.8
MSTRG.25195 Avicennia marina HOM05D004437 ORTHO05D005401 4.2e-44 181.8 124 74.2
HanXRQChr04g0122121 Helianthus annuus HOM05D004437 ORTHO05D005401 4.2e-44 181.8 156 63.5
COL.COLO4_23799 Corchorus olitorius HOM05D004437 ORTHO05D005401 3.6e-43 178.7 138 64.5
FvH4_7g12660 Fragaria vesca HOM05D004437 ORTHO05D005401 3.6e-43 178.7 132 68.9
PSO782G1895 Papaver somniferum HOM05D004437 ORTHO05D005401 3.6e-43 178.7 117 74.4
arahy.Tifrunner.gnm1.ann1.7T3GCC Arachis hypogaea HOM05D004437 ORTHO05D005401 4.6e-43 178.3 150 64.0
arahy.Tifrunner.gnm1.ann1.9F5S9Q Arachis hypogaea HOM05D004437 ORTHO05D005401 4.6e-43 178.3 149 64.4
SGA_v2.0_scaffold11G05840 Striga asiatica HOM05D000186 ORTHO05D001124 4.6e-43 178.3 115 75.7
MD04G1070900 Malus domestica HOM05D004437 ORTHO05D005401 6.1e-43 177.9 153 60.8
Cc02_g36970 Coffea canephora HOM05D004437 ORTHO05D005401 7.9e-43 177.6 120 73.3
FAN10G4017 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.0e-42 177.2 132 68.2
Potri.003G119300 Populus trichocarpa HOM05D004437 ORTHO05D005401 1.0e-42 177.2 119 74.8
AagrBONN_evm.TU.Sc2ySwM_228.779 Anthoceros agrestis HOM05D004437 ORTHO05D005401 1.4e-42 176.8 122 71.3
Hund16975 Selenicereus undatus HOM05D004437 ORTHO05D005401 1.8e-42 176.4 145 66.2
Zm00001eb208420 Zea mays HOM05D004437 ORTHO05D005401 1.8e-42 176.4 152 63.8
Lsat_1_v5_gn_7_59201 Lactuca sativa HOM05D004437 ORTHO05D005401 3.0e-42 175.6 159 61.6
FAN10G0783 Fragaria x ananassa HOM05D004437 ORTHO05D005401 3.9e-42 175.3 132 68.2
PSO478G3285 Papaver somniferum HOM05D004437 ORTHO05D005401 3.9e-42 175.3 156 64.1
unitig_578.g16077 Utricularia gibba HOM05D002183 ORTHO05D002169 5.1e-42 174.9 115 74.8
AagrBONN_evm.TU.Sc2ySwM_362.2206 Anthoceros agrestis HOM05D004437 ORTHO05D005401 6.7e-42 174.5 140 65.7
Hma1.2p1_2548F.1_g324200 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 6.7e-42 174.5 157 63.1
SEGI_23012 Sequoiadendron giganteum HOM05D004437 ORTHO05D005401 8.8e-42 174.1 143 67.1
Pp3c14_24540 Physcomitrium patens HOM05D004437 ORTHO05D005401 1.1e-41 173.7 140 65.7
Cpa.g.sc18.165 Carica papaya HOM05D004437 ORTHO05D005401 1.5e-41 173.3 115 77.4
COL.COLO4_12656 Corchorus olitorius HOM05D004437 ORTHO05D005401 2.0e-41 172.9 152 63.2
Prupe.5G087000 Prunus persica HOM05D004437 ORTHO05D005401 2.5e-41 172.6 153 60.8
ECA236G3516 Erigeron canadensis HOM05D004437 ORTHO05D005401 3.3e-41 172.2 131 69.5
EL10Ac5g12685 Beta vulgaris HOM05D004437 ORTHO05D005401 1.3e-40 170.2 134 67.9
ClCG00G000160 Citrullus lanatus HOM05D004437 ORTHO05D005401 3.7e-40 168.7 152 61.8
ClCG05G001990 Citrullus lanatus HOM05D004437 ORTHO05D005401 3.7e-40 168.7 159 60.4
ClCG10G003410 Citrullus lanatus HOM05D004437 ORTHO05D005401 3.7e-40 168.7 152 61.8
Mapoly0086s0082 Marchantia polymorpha HOM05D004437 ORTHO05D005401 4.8e-40 168.3 135 68.1
MSTRG.1255 Avicennia marina HOM05D004437 ORTHO05D005401 1.4e-39 166.8 148 62.8
EL10Ac1g00948 Beta vulgaris HOM05D004437 ORTHO05D005401 4.1e-39 165.2 135 64.4
CSS0011172 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 4.1e-39 165.2 112 75.0
Nitab4.5_0001702g0190 Nicotiana tabacum HOM05D004437 ORTHO05D005401 4.1e-39 165.2 145 65.5
CBR_g4404 Chara braunii HOM05D004437 ORTHO05D005401 1.5e-38 163.3 110 74.5
Potri.014G074000 Populus trichocarpa HOM05D004437 ORTHO05D005401 1.5e-38 163.3 141 62.4
Nitab4.5_0001127g0160 Nicotiana tabacum HOM05D004437 ORTHO05D005401 2.6e-38 162.5 145 64.1
CSS0004475 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 1.0e-37 160.6 110 74.5
FAN18G0922 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.0e-37 160.6 196 51.5
Aa31LG1G27110 Aethionema arabicum HOM05D004437 ORTHO05D005401 2.9e-37 159.1 120 70.0
SMO230G0007 Selaginella moellendorffii HOM05D004437 ORTHO05D005401 6.5e-37 157.9 137 62.0
AUR62033386 Chenopodium quinoa HOM05D004437 ORTHO05D005401 1.4e-36 156.8 183 51.9
AUR62004271 Chenopodium quinoa HOM05D004437 ORTHO05D005401 1.9e-36 156.4 152 57.2
vmacro13357 Vaccinium macrocarpon HOM05D004437 ORTHO05D005401 7.2e-36 154.5 208 49.5
SHI32178 Sapria himalayana HOM05D004437 ORTHO05D005401 1.2e-35 153.7 146 61.0
MBI04_g06621_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 3.0e-34 149.1 100 76.0
MBI04_g34692_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 3.0e-34 149.1 99 76.8
BcaC01g05120 Brassica carinata HOM05D004437 ORTHO05D005401 6.7e-34 147.9 114 61.4
Nitab4.5_0004622g0030 Nicotiana tabacum HOM05D004437 ORTHO05D005401 6.7e-34 147.9 116 64.7
Zm00001eb230470 Zea mays HOM05D004437 ORTHO05D005401 8.8e-34 147.5 152 57.2
Sed0003115 Sechium edule HOM05D004437 ORTHO05D005401 2.0e-33 146.4 112 67.0
BcaC02g12196 Brassica carinata HOM05D004437 ORTHO05D005401 3.3e-33 145.6 98 70.4
DCAR_006889 Daucus carota HOM05D004437 ORTHO05D005401 3.7e-32 142.1 137 57.7
Sabra01G0086400 Salix brachista HOM05D004437 ORTHO05D005401 1.4e-31 140.2 141 57.4
Sabra03G0083300 Salix brachista HOM05D004437 ORTHO05D005401 4.1e-31 138.7 99 72.7
HPP92_025880 Vanilla planifolia HOM05D004437 ORTHO05D005401 4.1e-31 138.7 95 70.5
FAN01G2781 Fragaria x ananassa HOM05D004437 ORTHO05D005401 9.1e-31 137.5 132 57.6
FAN06G0648 Fragaria x ananassa HOM05D004437 ORTHO05D005401 9.1e-31 137.5 132 57.6
MD00G1131900 Malus domestica HOM05D004437 ORTHO05D005401 1.2e-30 137.1 149 49.7
FAN06G3102 Fragaria x ananassa HOM05D004437 ORTHO05D005401 7.7e-30 134.4 132 56.8
TPR.G14692 Trifolium pratense HOM05D004437 ORTHO05D005401 5.5e-28 128.3 122 59.8
Cre09.g404400 Chlamydomonas reinhardtii HOM05D004437 ORTHO05D005401 7.2e-28 127.9 115 56.5
Lj9A574G30 Lonicera japonica HOM05D000186 ORTHO05D001124 4.7e-27 125.2 107 62.6
Haze_16715 Corylus avellana HOM05D004437 ORTHO05D005401 3.1e-23 112.5 75 76.0
CAN.G126.10 Capsicum annuum HOM05D004437 ORTHO05D005401 4.1e-23 112.1 64 79.7
Glyma.07G081500 Glycine max HOM05D004437 ORTHO05D005401 2.9e-21 105.9 59 83.1
Zm00001eb230390 Zea mays HOM05D004437 ORTHO05D004372 3.8e-21 105.5 59 78.0
Actinidia31448 Actinidia chinensis HOM05D004437 ORTHO05D005401 1.1e-20 104.0 122 54.9
CDE04G2772 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 5.5e-20 101.7 70 77.1
Oeu058600.1 Olea europaea HOM05D004437 ORTHO05D005401 3.0e-18 95.9 79 67.1
Glyma.20G186451 Glycine max HOM05D004437 ORTHO05D005401 5.2e-18 95.1 60 78.3
Haze_26096 Corylus avellana HOM05D004437 ORTHO05D005401 9.8e-17 90.9 116 43.1
A03p25260 Brassica napus HOM05D004437 ORTHO05D005401 9.1e-15 84.3 47 83.0
C03p30120 Brassica napus HOM05D004437 ORTHO05D005401 1.3e-13 80.5 71 56.3
BolC3t15361H Brassica oleracea HOM05D004437 ORTHO05D005401 1.1e-12 77.4 71 54.9
BraA03t11727Z Brassica rapa HOM05D004437 ORTHO05D005401 1.5e-12 77.0 71 54.9
DCAR_008576 Daucus carota HOM05D004437 ORTHO05D005401 1.9e-12 76.6 145 37.9
Atru.ctg1434.8 Acer truncatum HOM05D004437 ORTHO05D037942 1.2e-09 67.4 124 33.9
BcaC09g48983 Brassica carinata HOM05D004437 ORTHO05D005401 3.7e-08 62.4 39 69.2
Cfa022890 Carpinus fangiana HOM05D004437 ORTHO05D037942 5.9e-06 55.1 88 37.5


User provided reference genes

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