Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 2.8e-60 235.0 108 100.0
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.7e-49 199.1 96 94.8
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 4.2e-40 167.9 93 83.9
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 1.4e-35 152.9 93 76.3
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 3.1e-35 151.8 94 75.5
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.4e-30 136.3 98 66.3
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 1.8e-30 136.0 96 64.6
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 3.0e-30 135.2 93 66.7
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.1e-29 133.3 98 65.3
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 4.3e-29 131.3 97 62.9
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 5.7e-29 131.0 95 65.3
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 9.7e-29 130.2 99 60.6
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 1.3e-28 129.8 93 66.7
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 1.3e-28 129.8 100 63.0
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 1.3e-28 129.8 93 66.7
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 2.2e-28 129.0 95 65.3
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.2e-28 129.0 95 65.3
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.2e-28 129.0 93 66.7
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 2.8e-28 128.6 66 81.8
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 3.7e-28 128.3 93 66.7
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 3.7e-28 128.3 93 61.3
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 6.3e-28 127.5 93 67.7
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 2.4e-27 125.6 95 64.2
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 3.1e-27 125.2 93 62.4
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 6.9e-27 124.0 96 65.6
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 6.9e-27 124.0 96 65.6
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 6.9e-27 124.0 100 59.0
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 9.1e-27 123.6 96 64.6
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 9.1e-27 123.6 95 63.2
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 1.2e-26 123.2 102 56.9
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.2e-26 123.2 100 59.0
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 1.2e-26 123.2 101 61.4
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.5e-26 122.9 90 64.4
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 1.5e-26 122.9 95 63.2
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 2.0e-26 122.5 100 59.0
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 2.0e-26 122.5 99 61.6
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 2.6e-26 122.1 98 60.2
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 2.6e-26 122.1 98 61.2
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 2.6e-26 122.1 98 61.2
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 3.4e-26 121.7 96 63.5
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 4.5e-26 121.3 93 64.5
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 5.9e-26 120.9 75 69.3
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 7.7e-26 120.6 90 61.1
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 1.0e-25 120.2 93 63.4
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 1.3e-25 119.8 93 62.4
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 1.3e-25 119.8 93 62.4
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 1.3e-25 119.8 93 62.4
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 1.3e-25 119.8 93 62.4
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 1.3e-25 119.8 93 62.4
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.7e-25 119.4 101 60.4
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 1.7e-25 119.4 97 58.8
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 1.7e-25 119.4 95 61.1
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 2.9e-25 118.6 91 65.9
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 2.9e-25 118.6 95 62.1
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 5.0e-25 117.9 88 67.0
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 1.1e-24 116.7 73 71.2
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 1.9e-24 115.9 93 59.1
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 2.5e-24 115.5 97 59.8
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 2.5e-24 115.5 98 57.1
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 2.5e-24 115.5 66 75.8
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 2.5e-24 115.5 74 68.9
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 2.5e-24 115.5 106 57.5
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 3.2e-24 115.2 70 71.4
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 3.2e-24 115.2 99 58.6
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 3.2e-24 115.2 96 62.5
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 4.2e-24 114.8 94 58.5
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 7.2e-24 114.0 93 60.2
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 7.2e-24 114.0 66 75.8
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 7.2e-24 114.0 93 59.1
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 9.4e-24 113.6 93 59.1
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 1.6e-23 112.8 93 60.2
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.1e-23 112.5 66 69.7
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 2.1e-23 112.5 95 58.9
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 2.7e-23 112.1 94 59.6
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 2.7e-23 112.1 94 58.5
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 4.7e-23 111.3 97 58.8
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 4.7e-23 111.3 97 57.7
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 4.7e-23 111.3 95 57.9
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 4.7e-23 111.3 95 57.9
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 6.1e-23 110.9 95 55.8
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 7.9e-23 110.5 96 56.2
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 7.9e-23 110.5 79 62.0
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 7.9e-23 110.5 98 51.0
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 1.0e-22 110.2 94 58.5
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 1.0e-22 110.2 94 58.5
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 1.0e-22 110.2 65 70.8
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 1.0e-22 110.2 61 73.8
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.0e-22 110.2 95 56.8
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 1.8e-22 109.4 130 48.5
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 2.3e-22 109.0 93 54.8
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 1.1e-21 106.7 93 55.9
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 1.1e-21 106.7 74 66.2
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 2.6e-21 105.5 98 51.0
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 3.3e-21 105.1 95 57.9
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 1.3e-20 103.2 94 56.4
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 1.3e-20 103.2 75 58.7
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 1.7e-20 102.8 93 54.8
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 1.7e-20 102.8 90 55.6
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.7e-20 102.8 75 58.7
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 2.8e-20 102.1 76 59.2
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.8e-20 101.3 75 57.3
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 4.8e-20 101.3 87 56.3
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 8.2e-20 100.5 88 56.8
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 8.2e-20 100.5 66 65.2
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.8e-19 99.4 72 59.7
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 2.4e-19 99.0 75 56.0
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 2.4e-19 99.0 97 50.5
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 4.1e-19 98.2 75 56.0
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 3.4e-18 95.1 95 48.4
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 1.3e-17 93.2 75 53.3
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 2.5e-16 89.0 59 62.7
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 5.5e-16 87.8 47 76.6
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 4.7e-15 84.7 94 52.1
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.5e-13 79.7 97 48.5
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 2.8e-12 75.5 72 51.4
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 4.5e-10 68.2 48 64.6
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 1.3e-09 66.6 34 79.4
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 3.8e-09 65.1 61 54.1
CSS0025334 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 8.5e-09 63.9 33 75.8
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 1.1e-08 63.5 37 70.3
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 1.5e-08 63.2 34 73.5
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 1.9e-08 62.8 62 46.8
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 5.5e-08 61.2 64 51.6
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 8.0e-07 57.4 55 49.1


User provided reference genes

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