Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 5.1e-243 844.0 422 100.0
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 1.7e-230 802.4 422 95.7
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 5.6e-181 637.9 423 78.3
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 2.7e-143 512.7 412 66.5
Ah.07g208370 Amaranthus hybridus HOM05D004413 ORTHO05D005199 1.5e-130 470.3 431 59.6
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 4.5e-122 442.2 399 57.4
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 3.7e-108 396.0 413 52.8
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 3.7e-108 396.0 421 50.8
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 3.7e-108 396.0 426 51.2
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 4.8e-108 395.6 421 52.7
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 8.2e-108 394.8 410 52.7
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.1e-107 394.4 413 52.8
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 4.1e-107 392.5 419 52.3
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 1.6e-106 390.6 415 50.4
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 2.6e-106 389.8 413 52.5
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 1.0e-105 387.9 419 50.1
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 8.5e-105 384.8 401 53.1
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 1.1e-104 384.4 427 51.1
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 1.9e-104 383.6 415 50.8
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.6e-103 379.4 402 50.2
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 8.0e-103 378.3 408 50.7
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 2.3e-102 376.7 406 50.7
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 4.4e-101 372.5 404 50.5
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 1.3e-100 370.9 413 50.4
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 2.2e-100 370.2 407 51.4
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 2.8e-100 369.8 423 48.0
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 4.8e-100 369.0 425 48.0
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 6.3e-100 368.6 438 47.9
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 6.3e-100 368.6 404 50.7
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 1.8e-99 367.1 373 51.5
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 1.8e-99 367.1 413 50.8
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 3.1e-99 366.3 402 51.7
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 3.1e-99 366.3 402 49.5
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 5.3e-99 365.5 413 47.7
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 9.1e-99 364.8 373 51.5
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 1.2e-98 364.4 414 51.2
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 2.0e-98 363.6 402 49.3
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 4.5e-98 362.5 409 47.4
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 4.5e-98 362.5 443 47.0
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 5.9e-98 362.1 414 47.1
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 5.9e-98 362.1 404 49.5
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 2.2e-97 360.1 443 47.6
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 6.5e-97 358.6 402 50.0
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 8.5e-97 358.2 415 47.0
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 1.1e-96 357.8 402 48.8
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 1.5e-96 357.5 407 48.9
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 1.5e-96 357.5 465 44.5
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 1.9e-96 357.1 412 49.0
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 4.2e-96 355.9 401 47.9
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 5.5e-96 355.5 406 47.3
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 2.7e-95 353.2 439 46.5
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 3.6e-95 352.8 407 47.4
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 4.7e-95 352.4 412 48.3
PGR031G3941 Punica granatum HOM05D004413 ORTHO05D005199 4.7e-95 352.4 407 48.6
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 4.7e-95 352.4 402 48.5
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 2.3e-94 350.1 410 48.5
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 5.2e-94 349.0 412 48.3
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 5.2e-94 349.0 511 43.8
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 8.8e-94 348.2 392 50.0
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 8.8e-94 348.2 417 48.2
Aqoxy2G00074 Aquilegia oxysepala HOM05D004413 ORTHO05D005199 1.2e-93 347.8 397 48.6
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 3.4e-93 346.3 384 50.3
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 4.4e-93 345.9 422 47.9
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 5.7e-93 345.5 404 47.5
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 1.3e-92 344.4 425 45.4
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 1.7e-92 344.0 417 46.8
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 3.7e-92 342.8 415 47.0
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.7e-92 342.8 273 60.4
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 4.8e-92 342.4 311 57.2
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 6.3e-92 342.0 418 50.0
VMungo0464G1648 Vigna mungo HOM05D004413 ORTHO05D005199 6.3e-92 342.0 424 45.0
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 1.8e-91 340.5 435 47.4
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 2.4e-91 340.1 333 53.8
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 5.4e-91 339.0 304 57.6
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 2.0e-90 337.0 407 46.7
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 2.7e-90 336.7 400 50.8
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 4.5e-90 335.9 411 45.5
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 2.9e-89 333.2 406 46.6
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 2.9e-89 333.2 406 46.6
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 8.6e-89 331.6 394 47.5
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 2.5e-88 330.1 425 45.4
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 2.5e-88 330.1 425 45.4
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 5.5e-88 328.9 405 45.2
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 6.1e-87 325.5 296 54.4
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 4.0e-86 322.8 425 45.2
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 4.0e-86 322.8 394 44.4
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 5.2e-86 322.4 425 44.5
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 6.8e-86 322.0 405 45.4
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 2.0e-85 320.5 421 44.4
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 3.4e-85 319.7 444 43.2
PSO210G0136 Papaver somniferum HOM05D004413 ORTHO05D005199 5.7e-85 318.9 419 45.3
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 7.5e-85 318.5 357 48.5
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 1.3e-84 317.8 423 45.6
PSO210G4410 Papaver somniferum HOM05D004413 ORTHO05D005199 1.3e-84 317.8 421 45.6
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 2.8e-84 316.6 279 57.3
CDE12G0144 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 2.0e-82 310.5 426 42.5
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 5.0e-81 305.8 413 44.1
PSO170G4481 Papaver somniferum HOM05D004413 ORTHO05D005199 3.3e-80 303.1 428 43.5
CDE04G1207 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 9.5e-80 301.6 429 41.5
arahy.Tifrunner.gnm1.ann1.MVM3BY Arachis hypogaea HOM05D004413 ORTHO05D005199 3.0e-78 296.6 419 42.2
HanXRQChr16g0520481 Helianthus annuus HOM05D004413 ORTHO05D005199 6.8e-78 295.4 521 36.7
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 8.9e-78 295.0 400 44.8
arahy.Tifrunner.gnm1.ann1.0XNQ2B Arachis hypogaea HOM05D004413 ORTHO05D005199 1.2e-77 294.7 414 42.0
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 8.3e-76 288.5 452 39.8
BcaC08g43081 Brassica carinata HOM05D004413 ORTHO05D005199 1.1e-72 278.1 277 52.7
C06p03410 Brassica napus HOM05D004413 ORTHO05D005199 1.2e-71 274.6 277 52.3
BolC6t35480H Brassica oleracea HOM05D004413 ORTHO05D005199 1.2e-71 274.6 277 52.3
ATR0582G367 Amborella trichopoda HOM05D004413 ORTHO05D005199 2.1e-71 273.9 430 39.3
SHI15877 Sapria himalayana HOM05D004413 ORTHO05D005199 2.8e-71 273.5 378 41.3
A06p04180 Brassica napus HOM05D004413 ORTHO05D005199 6.8e-70 268.9 278 51.4
BraA06t23623Z Brassica rapa HOM05D004413 ORTHO05D005199 6.8e-70 268.9 278 51.4
Zm00001eb140340 Zea mays HOM05D004413 ORTHO05D005199 4.4e-69 266.2 309 46.0
Os01g0962500 Oryza sativa ssp. japonica HOM05D004413 ORTHO05D005199 7.5e-69 265.4 328 46.0
ECA234G1090 Erigeron canadensis HOM05D004413 ORTHO05D005199 2.1e-63 247.3 338 42.9
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 1.1e-62 245.0 232 56.5
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 2.0e-61 240.7 292 47.9
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 1.4e-59 234.6 242 48.3
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 5.4e-59 232.6 295 47.1
SEGI_33976 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 7.8e-58 228.8 290 41.0
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 2.5e-56 223.8 345 42.3
Dinv43485 Davidia involucrata HOM05D004413 ORTHO05D005199 9.5e-56 221.9 168 62.5
SGA_v2.0_scaffold4G02237 Striga asiatica HOM05D004413 ORTHO05D005199 1.0e-49 201.8 188 54.3
SMO351G0528 Selaginella moellendorffii HOM05D004413 ORTHO05D005199 8.1e-47 192.2 281 39.1
Pp3c11_18200 Physcomitrium patens HOM05D004413 ORTHO05D005199 2.0e-45 187.6 284 37.7
PSO170G2986 Papaver somniferum HOM05D004413 ORTHO05D005199 9.3e-43 178.7 258 41.9
Sopen01g033590 Solanum pennellii HOM05D004413 ORTHO05D005199 5.1e-41 172.9 157 56.1
Cre01.g049400 Chlamydomonas reinhardtii HOM05D004413 ORTHO05D005199 2.5e-40 170.6 253 37.9
Mapoly0103s0075 Marchantia polymorpha HOM05D004413 ORTHO05D005199 2.5e-40 170.6 303 36.6
Sopen01g033580 Solanum pennellii HOM05D004413 ORTHO05D005199 7.3e-40 169.1 143 60.1
DCAR_015691 Daucus carota HOM05D004413 ORTHO05D005199 6.9e-38 162.5 131 60.3
GSVIVG01027705001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.2e-37 161.8 153 54.9
AagrBONN_evm.TU.Sc2ySwM_228.625 Anthoceros agrestis HOM05D004413 ORTHO05D005199 3.8e-36 156.8 279 35.8
CBR_g50781 Chara braunii HOM05D004413 ORTHO05D005199 1.1e-35 155.2 278 33.8
SEGI_10444 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 5.3e-30 136.3 214 36.4
Actinidia21570 Actinidia chinensis HOM05D004413 ORTHO05D005199 9.0e-30 135.6 108 59.3
SEGI_03996 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 7.6e-29 132.5 214 36.0
Aa31LG1G19980 Aethionema arabicum HOM05D004413 ORTHO05D005199 5.5e-27 126.3 166 47.6
GSVIVG01027710001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.2e-26 125.2 99 61.6
Actinidia15863 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.4e-22 111.7 99 53.5
BraA09t42095Z Brassica rapa HOM05D004413 ORTHO05D005199 1.2e-21 108.6 98 52.0
DCAR_015690 Daucus carota HOM05D004413 ORTHO05D005199 2.5e-19 100.9 218 36.7
A08p37250 Brassica napus HOM05D004413 ORTHO05D005199 4.2e-19 100.1 69 60.9
PRCOL_00005718 Prasinoderma coloniale HOM05D004413 ORTHO05D005199 7.1e-19 99.4 175 33.7
MCO07G333 Micromonas commoda HOM05D004413 ORTHO05D005199 1.6e-18 98.2 278 28.1
GSVIVG01027698001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.1e-16 92.0 63 61.9
HanXRQChr11g0328201 Helianthus annuus HOM05D004413 ORTHO05D005199 3.3e-16 90.5 74 55.4
GSVIVG01018194001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.8e-15 87.4 68 58.8
TAR633G2579 Trochodendron aralioides HOM05D004413 ORTHO05D005199 6.3e-15 86.3 100 44.0
QL04p000430 Quercus lobata HOM05D004413 ORTHO05D005199 1.8e-14 84.7 217 31.8
TWI73G0758 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 9.0e-14 82.4 96 49.0
Manes.10G149900 Manihot esculenta HOM05D000073 ORTHO05D000033 3.4e-13 80.5 81 48.1
Actinidia15864 Actinidia chinensis HOM05D004413 ORTHO05D005199 4.5e-13 80.1 80 47.5
Sc24g0000530 Simmondsia chinensis HOM05D004413 ORTHO05D005199 3.8e-12 77.0 137 37.2
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 1.6e-10 71.6 68 50.0
GSVIVG01026105001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.6e-10 70.5 53 64.2
GSVIVG01027696001 Vitis vinifera HOM05D004413 ORTHO05D005199 4.6e-10 70.1 48 58.3
GSVIVG01027714001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.0e-09 68.9 168 36.3
GSVIVG01012403001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.3e-09 67.8 53 60.4
Nitab4.5_0003792g0060 Nicotiana tabacum HOM05D004413 ORTHO05D005199 2.0e-08 64.7 70 45.7


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