Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.1e-150 536.6 263 100.0
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.0e-23 114.8 83 73.5
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.3e-23 114.4 83 72.3
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 5.6e-22 109.0 83 68.7
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 9.6e-22 108.2 83 68.7
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 4.8e-21 105.9 83 67.5
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 2.4e-20 103.6 76 69.7
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 4.0e-20 102.8 76 67.1
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 4.0e-20 102.8 76 68.4
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 4.0e-20 102.8 83 66.3
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 5.3e-20 102.4 52 88.5
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 5.3e-20 102.4 76 68.4
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 6.9e-20 102.1 83 66.3
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 9.0e-20 101.7 83 65.1
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 9.0e-20 101.7 83 63.9
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 1.2e-19 101.3 76 67.1
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 1.2e-19 101.3 83 63.9
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 1.2e-19 101.3 83 65.1
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 1.5e-19 100.9 52 86.5
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 2.0e-19 100.5 52 88.5
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 2.0e-19 100.5 83 62.7
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 2.0e-19 100.5 83 65.1
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 2.0e-19 100.5 52 86.5
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 2.0e-19 100.5 83 63.9
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.6e-19 100.1 83 63.9
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 2.6e-19 100.1 76 67.1
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 2.6e-19 100.1 76 65.8
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 2.6e-19 100.1 83 65.1
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 2.6e-19 100.1 83 63.9
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 3.4e-19 99.8 76 67.1
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 3.4e-19 99.8 84 64.3
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 3.4e-19 99.8 51 86.3
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 4.5e-19 99.4 76 65.8
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 4.5e-19 99.4 83 62.7
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 4.5e-19 99.4 83 63.9
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 7.6e-19 98.6 83 62.7
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 7.6e-19 98.6 51 86.3
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 7.6e-19 98.6 51 86.3
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 7.6e-19 98.6 76 65.8
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 9.9e-19 98.2 76 65.8
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 9.9e-19 98.2 83 62.7
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 9.9e-19 98.2 52 84.6
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 9.9e-19 98.2 85 60.0
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 9.9e-19 98.2 76 65.8
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 1.3e-18 97.8 52 84.6
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 1.3e-18 97.8 76 65.8
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 1.3e-18 97.8 76 65.8
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 1.3e-18 97.8 76 64.5
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 1.3e-18 97.8 83 63.9
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 1.7e-18 97.4 83 62.7
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 1.7e-18 97.4 76 65.8
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 1.7e-18 97.4 83 62.7
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 1.7e-18 97.4 52 84.6
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 1.7e-18 97.4 83 62.7
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 2.2e-18 97.1 76 65.8
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.2e-18 97.1 51 84.3
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 2.2e-18 97.1 84 60.7
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 2.9e-18 96.7 83 62.7
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 3.8e-18 96.3 76 63.2
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 3.8e-18 96.3 51 86.3
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 6.4e-18 95.5 73 65.8
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 8.4e-18 95.1 83 61.4
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 8.4e-18 95.1 83 61.4
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 8.4e-18 95.1 76 60.5
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 8.4e-18 95.1 76 60.5
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 8.4e-18 95.1 76 63.2
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 1.1e-17 94.7 76 63.2
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 1.1e-17 94.7 76 64.5
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 1.1e-17 94.7 76 63.2
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 1.4e-17 94.4 83 61.4
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 1.4e-17 94.4 83 59.0
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 1.4e-17 94.4 83 61.4
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 2.4e-17 93.6 52 82.7
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 2.4e-17 93.6 81 63.0
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 3.2e-17 93.2 83 60.2
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 3.2e-17 93.2 83 62.7
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 4.2e-17 92.8 76 63.2
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 4.2e-17 92.8 95 56.8
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 5.4e-17 92.4 83 61.4
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 5.4e-17 92.4 83 59.0
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 5.4e-17 92.4 83 59.0
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 5.4e-17 92.4 83 61.4
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 5.4e-17 92.4 83 59.0
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 7.1e-17 92.0 76 63.2
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 7.1e-17 92.0 76 63.2
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 7.1e-17 92.0 76 61.8
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 9.3e-17 91.7 52 80.8
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 9.3e-17 91.7 52 80.8
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 9.3e-17 91.7 52 80.8
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 1.2e-16 91.3 76 61.8
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 1.2e-16 91.3 76 60.5
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 2.1e-16 90.5 83 60.2
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 2.7e-16 90.1 52 78.8
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 3.5e-16 89.7 52 78.8
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 4.6e-16 89.4 76 61.8
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 6.0e-16 89.0 83 60.2
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 6.0e-16 89.0 83 60.2
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 7.9e-16 88.6 76 60.5
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 1.0e-15 88.2 83 56.6
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 1.3e-15 87.8 76 59.2
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 1.3e-15 87.8 76 60.5
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 1.8e-15 87.4 76 59.2
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.3e-15 87.0 70 62.9
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 8.7e-15 85.1 76 59.2
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 1.5e-14 84.3 51 72.5
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 3.3e-14 83.2 76 55.3
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 7.4e-14 82.0 52 67.3
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 2.1e-13 80.5 52 67.3
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 3.7e-13 79.7 77 55.8
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 3.7e-13 79.7 52 69.2
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 6.2e-13 79.0 52 67.3
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 1.4e-12 77.8 52 65.4
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 6.9e-12 75.5 41 78.0
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 3.4e-11 73.2 38 84.2
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 3.4e-11 73.2 62 56.5
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 4.9e-10 69.3 52 57.7
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 1.4e-09 67.8 52 59.6
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 4.2e-09 66.2 62 54.8
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 2.7e-08 63.5 58 48.3
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 2.3e-07 60.5 56 41.1
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.1e-06 58.2 52 50.0


User provided reference genes

Program Settings