Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62015479 Chenopodium quinoa HOM05D006440 ORTHO05D003987 0.0e+00 1187.6 580 100.0
AUR62002263 Chenopodium quinoa HOM05D006440 ORTHO05D003987 0.0e+00 1114.8 667 84.3
EL10Ac3g05914 Beta vulgaris HOM05D006440 ORTHO05D003987 2.7e-279 964.9 599 80.6
Hund04543 Selenicereus undatus HOM05D006440 ORTHO05D003987 4.7e-263 911.0 597 78.1
Ah.07g207430 Amaranthus hybridus HOM05D006440 ORTHO05D003987 1.7e-260 902.5 592 76.7
QL06p016694 Quercus lobata HOM05D006440 ORTHO05D003987 3.3e-240 835.1 600 70.2
GSVIVG01027730001 Vitis vinifera HOM05D006440 ORTHO05D003987 9.5e-240 833.6 601 69.1
Ciclev10004596m.g Citrus clementina HOM05D006440 ORTHO05D003987 6.8e-238 827.4 600 67.7
CSS0026181 Camellia sinensis var. sinensis HOM05D006440 ORTHO05D003987 4.9e-236 821.2 601 67.9
Atru.chr4.2134 Acer truncatum HOM05D006440 ORTHO05D003987 1.9e-235 819.3 599 67.6
CiPaw.02G114500 Carya illinoinensis HOM05D006440 ORTHO05D003987 7.1e-235 817.4 599 68.3
HanXRQChr13g0418761 Helianthus annuus HOM05D006440 ORTHO05D003987 7.8e-234 813.9 599 66.4
Lalb_Chr02g0150571 Lupinus albus HOM05D006440 ORTHO05D003987 1.3e-233 813.1 600 67.7
CsaV3_3G012320 Cucumis sativus L. HOM05D006440 ORTHO05D003987 5.6e-232 807.7 602 66.3
MELO3C006441.2 Cucumis melo HOM05D006440 ORTHO05D003987 9.5e-232 807.0 602 66.4
Sed0013572 Sechium edule HOM05D006440 ORTHO05D003987 2.8e-231 805.4 600 66.7
Cc03_g05160 Coffea canephora HOM05D006440 ORTHO05D003987 1.1e-230 803.5 605 65.8
Eucgr.H03137 Eucalyptus grandis HOM05D006440 ORTHO05D003987 2.4e-230 802.4 600 65.7
DCAR_027296 Daucus carota HOM05D006440 ORTHO05D003987 8.9e-230 800.4 599 66.1
Manes.03G166900 Manihot esculenta HOM05D006440 ORTHO05D003987 1.2e-229 800.0 603 65.5
Prupe.1G035000 Prunus persica HOM05D006440 ORTHO05D003987 2.6e-229 798.9 600 67.2
TAR365G0504 Trochodendron aralioides HOM05D006440 ORTHO05D003987 3.4e-229 798.5 601 66.9
Duzib212G0326 Durio zibethinus HOM05D006440 ORTHO05D003987 7.6e-229 797.3 599 65.6
Rhsim04G0187900 Rhododendron simsii HOM05D006440 ORTHO05D003987 9.9e-229 797.0 635 65.4
Gohir.A09G225400 Gossypium hirsutum HOM05D006440 ORTHO05D003987 4.9e-228 794.7 599 65.9
Lj5g0005322 Lotus japonicus HOM05D006440 ORTHO05D003987 1.1e-227 793.5 601 66.2
Sopen09g032600 Solanum pennellii HOM05D006440 ORTHO05D003987 1.1e-227 793.5 598 66.7
Ca_09816_v3 Cicer arietinum L. HOM05D006440 ORTHO05D003987 1.4e-227 793.1 599 65.8
TWI09G0180 Tripterygium wilfordii HOM05D006440 ORTHO05D003987 1.4e-227 793.1 599 67.1
Nn1g02707 Nelumbo nucifera HOM05D006440 ORTHO05D003987 4.2e-227 791.6 605 65.6
Potri.010G073600 Populus trichocarpa HOM05D006440 ORTHO05D003987 4.2e-227 791.6 600 66.0
vmacro08450 Vaccinium macrocarpon HOM05D006440 ORTHO05D003987 1.2e-226 790.0 669 61.7
CAN.G793.7 Capsicum annuum HOM05D006440 ORTHO05D003987 2.7e-226 788.9 599 66.6
Sc25g0004030 Simmondsia chinensis HOM05D006440 ORTHO05D003987 3.5e-226 788.5 532 74.4
Potri.008G165000 Populus trichocarpa HOM05D006440 ORTHO05D003987 1.0e-225 786.9 605 65.6
Gohir.D09G227100 Gossypium hirsutum HOM05D006440 ORTHO05D003987 3.9e-225 785.0 605 65.5
CANSAT78G1511 Cannabis sativa HOM05D006440 ORTHO05D003987 1.5e-224 783.1 601 65.6
Medtr1g073920 Medicago truncatula HOM05D006440 ORTHO05D003987 7.3e-224 780.8 599 65.3
MD13G1210600 Malus domestica HOM05D006440 ORTHO05D003987 3.6e-223 778.5 600 65.3
Glyma.20G202700 Glycine max HOM05D006440 ORTHO05D003987 8.1e-223 777.3 598 64.0
Phvul.007G129000 Phaseolus vulgaris HOM05D006440 ORTHO05D003987 8.1e-223 777.3 599 64.3
COL.COLO4_15832 Corchorus olitorius HOM05D006440 ORTHO05D003987 1.1e-222 776.9 600 64.3
VMungo0720G1034 Vigna mungo HOM05D006440 ORTHO05D003987 1.1e-222 776.9 599 64.8
SalBow2G2218 Salvia bowleyana HOM05D006440 ORTHO05D003987 1.5e-221 773.1 621 64.4
arahy.Tifrunner.gnm1.ann1.WJ3SQN Arachis hypogaea HOM05D006440 ORTHO05D003987 7.6e-221 770.8 587 65.6
PGR004G0512 Punica granatum HOM05D006440 ORTHO05D003987 4.9e-220 768.1 598 63.0
Glyma.10G188100 Glycine max HOM05D006440 ORTHO05D003987 6.4e-220 767.7 599 63.8
Migut.G00449 Erythranthe guttata HOM05D006440 ORTHO05D003987 1.9e-219 766.1 602 64.6
ClCG05G004420 Citrullus lanatus HOM05D006440 ORTHO05D003987 7.1e-219 764.2 640 60.6
ECA240G3037 Erigeron canadensis HOM05D006440 ORTHO05D003987 1.2e-218 763.5 584 65.8
Aqoxy2G03617 Aquilegia oxysepala HOM05D006440 ORTHO05D003987 4.6e-218 761.5 600 63.7
arahy.Tifrunner.gnm1.ann1.A0C0SS Arachis hypogaea HOM05D006440 ORTHO05D003987 4.6e-218 761.5 598 64.0
MSTRG.9914 Avicennia marina HOM05D006440 ORTHO05D003987 7.8e-218 760.8 603 64.7
Dinv29887 Davidia involucrata HOM05D006440 ORTHO05D003188 5.6e-216 754.6 559 68.7
SGA_v2.0_scaffold88G27269 Striga asiatica HOM05D006440 ORTHO05D003987 1.8e-214 749.6 596 65.6
Sabra10G0034700 Salix brachista HOM05D006440 ORTHO05D003987 2.4e-214 749.2 639 60.4
FAN12G1575 Fragaria x ananassa HOM05D006440 ORTHO05D003987 4.0e-214 748.4 582 64.3
Lsat_1_v5_gn_3_121341 Lactuca sativa HOM05D006440 ORTHO05D003987 9.0e-214 747.3 597 62.8
RcHm_v2.0_Chr4g0391871 Rosa chinensis HOM05D006440 ORTHO05D003987 7.6e-213 744.2 599 61.6
FAN22G0224 Fragaria x ananassa HOM05D006440 ORTHO05D003987 2.9e-212 742.3 582 63.7
FAN17G2886 Fragaria x ananassa HOM05D006440 ORTHO05D003987 4.9e-212 741.5 599 62.4
PSO017G7287 Papaver somniferum HOM05D006440 ORTHO05D003987 2.4e-211 739.2 601 61.7
MBI18_g37356_MAGBIO Magnolia biondii HOM05D006440 ORTHO05D003987 9.3e-211 737.3 648 57.6
FvH4_4g03210 Fragaria vesca HOM05D006440 ORTHO05D003987 2.1e-210 736.1 599 62.3
PSO063G3815 Papaver somniferum HOM05D006440 ORTHO05D003987 1.5e-208 729.9 601 60.9
THA.LOC104815988 Tarenaya hassleriana HOM05D006440 ORTHO05D003987 2.2e-204 716.1 598 60.0
Solyc09g089660.4 Solanum lycopersicum HOM05D006440 ORTHO05D003987 4.2e-203 711.8 551 65.7
Aa31LG5G3660 Aethionema arabicum HOM05D006440 ORTHO05D003987 8.7e-201 704.1 582 61.0
Gorai.006G249000 Gossypium raimondii HOM05D006440 ORTHO05D003987 1.1e-200 703.7 559 63.9
Oeu025570.2 Olea europaea HOM05D006440 ORTHO05D000397 1.1e-198 697.2 543 65.4
Psat6g132960 Pisum sativum HOM05D006440 ORTHO05D003987 1.2e-197 693.7 599 60.1
Thhalv10003170m.g Eutrema salsugineum HOM05D006440 ORTHO05D003987 6.5e-196 688.0 603 58.7
BcaB07g30569 Brassica carinata HOM05D006440 ORTHO05D003987 8.4e-196 687.6 601 58.7
CDE06G0279 Ceratophyllum demersum HOM05D006440 ORTHO05D003987 1.9e-195 686.4 601 59.7
Sp2g08350 Schrenkiella parvula HOM05D006440 ORTHO05D003987 9.3e-195 684.1 600 58.7
C02p44000 Brassica napus HOM05D006440 ORTHO05D003987 4.6e-194 681.8 599 58.3
Peaxi162Scf00024g01821 Petunia axillaris HOM05D006440 ORTHO05D003987 1.8e-193 679.9 533 64.9
BcaC03g16584 Brassica carinata HOM05D006440 ORTHO05D003987 2.3e-193 679.5 601 58.2
BolC2t10447H Brassica oleracea HOM05D006440 ORTHO05D003987 8.7e-193 677.6 599 58.3
unitig_748.g7321 Utricularia gibba HOM05D006440 ORTHO05D003987 1.6e-191 673.3 621 57.3
Actinidia04464 Actinidia chinensis HOM05D006440 ORTHO05D003987 5.3e-190 668.3 523 66.3
Lj6A660T45 Lonicera japonica HOM05D006440 ORTHO05D003987 5.3e-190 668.3 591 59.9
Nitab4.5_0008345g0020 Nicotiana tabacum HOM05D006440 ORTHO05D003987 5.9e-189 664.8 507 65.3
BraA02t07826Z Brassica rapa HOM05D006440 ORTHO05D003987 1.0e-188 664.1 601 56.9
Os04g0177600 Oryza sativa ssp. japonica HOM05D006440 ORTHO05D003987 2.9e-188 662.5 601 57.4
A02p27870 Brassica napus HOM05D006440 ORTHO05D003987 3.8e-188 662.1 600 56.8
AL8G16820 Arabidopsis lyrata HOM05D006440 ORTHO05D003987 2.5e-187 659.4 600 57.5
Manes.15G038500 Manihot esculenta HOM05D006440 ORTHO05D003987 5.5e-187 658.3 591 58.5
ATR0680G034 Amborella trichopoda HOM05D006440 ORTHO05D003987 1.0e-185 654.1 577 59.1
AT5G43500 Arabidopsis thaliana HOM05D006440 ORTHO05D003987 1.0e-185 654.1 601 57.2
CARHR180120 Cardamine hirsuta HOM05D006440 ORTHO05D003987 6.7e-185 651.4 599 56.4
Thecc.04G250600 Theobroma cacao HOM05D006440 ORTHO05D003987 1.1e-184 650.6 599 57.1
Haze_11338 Corylus avellana HOM05D006440 ORTHO05D003987 7.7e-181 637.9 655 53.4
TPR.G26431 Trifolium pratense HOM05D006440 ORTHO05D003987 3.8e-180 635.6 484 65.9
Carub.0008s0511 Capsella rubella HOM05D006440 ORTHO05D003987 7.7e-173 611.3 564 56.6
Nitab4.5_0000342g0190 Nicotiana tabacum HOM05D006440 ORTHO05D003987 6.3e-151 538.5 532 54.9
Psat2g067040 Pisum sativum HOM05D006440 ORTHO05D003987 1.1e-129 468.0 381 62.5
Pp3c3_14850 Physcomitrium patens HOM05D006440 ORTHO05D003987 3.7e-127 459.5 611 43.7
SMO117G0008 Selaginella moellendorffii HOM05D006440 ORTHO05D003987 4.4e-120 436.0 595 41.3
HPP92_008424 Vanilla planifolia HOM05D006440 ORTHO05D003987 7.6e-120 435.3 397 56.9
Mapoly0028s0034 Marchantia polymorpha HOM05D006440 ORTHO05D003987 3.9e-116 422.9 466 48.9
PGSC0003DMG400017256 Solanum tuberosum HOM05D006440 ORTHO05D003987 5.3e-97 359.4 244 71.3
MD16G1213700 Malus domestica HOM05D006440 ORTHO05D003987 7.6e-88 328.9 541 41.2
Zm00001eb087460 Zea mays HOM05D006440 ORTHO05D003987 6.5e-79 299.3 250 58.4
Cpa.g.sc44.85 Carica papaya HOM05D006440 ORTHO05D003987 6.1e-77 292.7 204 71.1
Zm00001eb087470 Zea mays HOM05D006440 ORTHO05D003987 2.6e-72 277.3 290 52.1
CBR_g37544 Chara braunii HOM05D000019 ORTHO05D000002 3.4e-64 250.4 626 31.0
HPP92_027995 Vanilla planifolia HOM05D006440 ORTHO05D003987 3.1e-57 227.3 167 65.9
HanXRQChr13g0422471 Helianthus annuus HOM05D006440 ORTHO05D003987 3.8e-39 167.2 165 55.2
HPP92_008423 Vanilla planifolia HOM05D006440 ORTHO05D003987 5.9e-32 143.3 133 54.9
SEGI_34555 Sequoiadendron giganteum HOM05D006440 ORTHO05D003987 2.3e-31 141.4 109 59.6
HanXRQChr13g0422461 Helianthus annuus HOM05D006440 ORTHO05D003987 2.5e-30 137.9 81 71.6
Dinv44661 Davidia involucrata HOM05D006440 ORTHO05D003987 1.4e-28 132.1 101 66.3
Hma1.2p1_1716F.1_g299120 Hydrangea macrophylla HOM05D006440 ORTHO05D003987 8.9e-20 102.8 54 81.5
SHI00689 Sapria himalayana HOM05D006440 ORTHO05D003987 2.8e-13 81.3 52 76.9
Cfa026271 Carpinus fangiana HOM05D006440 ORTHO05D003987 1.4e-12 79.0 296 24.0
SHI00694 Sapria himalayana HOM05D006440 ORTHO05D003987 9.2e-09 66.2 86 48.8
SHI00691 Sapria himalayana HOM05D000023 ORTHO05D000014 2.7e-08 64.7 44 65.9
Haze_11337 Corylus avellana HOM05D006440 ORTHO05D003987 4.6e-08 63.9 33 87.9
MD16G1213300 Malus domestica HOM05D006440 ORTHO05D003987 2.3e-07 61.6 42 59.5
arahy.Tifrunner.gnm1.ann1.IPBD8F Arachis hypogaea HOM05D002333 ORTHO05D003987 3.0e-07 61.2 67 52.2
Nn5g28601 Nelumbo nucifera HOM05D006440 ORTHO05D003987 3.3e-06 57.8 54 53.7


User provided reference genes

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