Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.7e-285 985.3 500 100.0
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 2.0e-185 652.9 541 65.1
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 4.7e-179 631.7 371 89.5
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 2.6e-169 599.4 531 60.5
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 6.0e-150 535.0 436 66.3
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 3.7e-139 499.2 568 51.2
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 3.1e-138 496.1 559 50.4
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.4e-133 480.7 544 50.6
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 2.5e-132 476.5 554 48.9
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.3e-132 476.1 555 49.9
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 4.3e-132 475.7 541 51.9
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 7.4e-132 474.9 542 50.2
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 9.7e-132 474.6 564 49.8
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 2.8e-131 473.0 554 48.7
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 3.7e-131 472.6 544 50.0
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 6.3e-131 471.9 618 45.6
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 2.4e-130 469.9 546 50.0
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 3.1e-130 469.5 550 48.9
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 4.1e-130 469.2 602 47.2
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 3.4e-129 466.1 554 48.2
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 1.0e-128 464.5 560 48.8
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 2.9e-128 463.0 554 48.2
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 3.8e-128 462.6 576 48.3
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 8.5e-128 461.5 558 48.7
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 4.7e-126 455.7 550 49.1
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 7.9e-126 454.9 557 46.9
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 1.0e-125 454.5 533 48.2
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 5.1e-125 452.2 560 46.4
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 4.4e-124 449.1 572 47.9
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 7.4e-124 448.4 536 47.4
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 9.7e-124 448.0 541 47.3
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 9.7e-124 448.0 557 46.7
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 1.3e-123 447.6 548 47.8
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 2.2e-123 446.8 553 47.6
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 2.2e-123 446.8 556 48.0
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 3.7e-123 446.0 545 48.3
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 8.2e-123 444.9 517 49.3
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 1.4e-122 444.1 559 46.3
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 4.1e-122 442.6 516 50.6
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 5.3e-122 442.2 562 46.8
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 5.3e-122 442.2 546 47.4
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 1.5e-121 440.7 494 50.6
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 3.5e-121 439.5 563 46.7
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 5.9e-121 438.7 509 49.7
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 1.3e-120 437.6 545 47.9
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 1.3e-120 437.6 571 45.4
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 5.0e-120 435.6 505 51.1
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 6.5e-120 435.3 505 51.1
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 6.5e-120 435.3 511 50.7
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 1.9e-119 433.7 513 50.7
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 1.9e-119 433.7 520 47.9
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 4.2e-119 432.6 423 56.7
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 7.2e-119 431.8 534 46.1
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 9.4e-119 431.4 532 46.1
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 1.2e-118 431.0 533 48.0
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 2.1e-118 430.3 520 48.7
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 2.1e-118 430.3 510 49.8
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 4.7e-118 429.1 528 47.2
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 4.7e-118 429.1 510 49.8
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 2.3e-117 426.8 510 50.2
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 3.0e-117 426.4 518 47.5
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 3.0e-117 426.4 522 48.3
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 3.9e-117 426.0 502 49.2
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 6.7e-117 425.2 518 48.1
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 1.1e-116 424.5 511 48.7
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 2.0e-116 423.7 525 46.3
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 3.3e-116 422.9 511 49.1
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 3.3e-116 422.9 581 44.1
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 4.4e-116 422.5 513 49.5
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 4.4e-116 422.5 510 47.3
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 5.7e-116 422.2 498 49.2
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 5.7e-116 422.2 502 50.6
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 5.7e-116 422.2 562 44.5
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 7.4e-116 421.8 549 46.8
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 1.3e-115 421.0 506 50.0
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 1.3e-115 421.0 506 50.0
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 8.2e-115 418.3 541 45.5
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.4e-114 417.5 511 48.7
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 1.0e-112 411.4 533 46.0
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 5.5e-111 405.6 596 42.1
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 1.2e-110 404.4 437 52.9
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 3.6e-110 402.9 490 47.1
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 4.7e-110 402.5 545 45.0
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 4.7e-110 402.5 578 44.1
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 8.3e-107 391.7 521 47.4
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 4.1e-106 389.4 524 44.3
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.2e-105 387.9 511 46.6
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 1.6e-105 387.5 558 42.8
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 2.7e-105 386.7 412 54.4
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 1.0e-104 384.8 454 49.1
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.3e-104 384.4 497 47.1
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 2.2e-104 383.6 537 42.3
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 9.4e-103 378.3 445 48.8
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 2.4e-98 363.6 474 43.9
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 1.0e-93 348.2 368 53.5
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 1.7e-91 340.9 561 40.1
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 8.0e-86 322.0 252 64.7
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 1.3e-83 314.7 336 53.0
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 2.5e-79 300.4 258 60.5
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 5.4e-74 282.7 256 60.5
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 9.2e-74 282.0 559 35.2
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 7.3e-71 272.3 554 33.0
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 1.4e-69 268.1 566 33.6
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 1.7e-67 261.2 231 59.3
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 4.2e-58 229.9 250 50.8
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 1.9e-50 204.5 209 53.1
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 5.1e-48 196.4 267 46.4
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 9.6e-47 192.2 232 46.1
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 2.2e-43 181.0 253 39.5
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 2.6e-36 157.5 108 72.2
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 5.8e-36 156.4 255 38.0
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 4.2e-34 150.2 218 39.4
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.1e-33 147.9 140 55.7
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 1.0e-32 145.6 228 42.5
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 1.3e-30 138.7 106 68.9
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 2.2e-27 127.9 250 33.6
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 1.9e-26 124.8 194 37.1
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.9e-23 114.8 124 48.4
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 7.4e-23 112.8 221 34.4
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 9.7e-23 112.5 150 44.7
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 2.5e-18 97.8 58 79.3
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 3.6e-17 94.0 93 57.0
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 9.7e-15 85.9 168 32.7
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 1.3e-14 85.5 138 38.4
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.8e-14 84.3 77 55.8
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.1e-13 82.4 192 31.2
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 4.5e-12 77.0 39 84.6
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 3.8e-11 73.9 65 60.0
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 1.4e-08 65.5 296 26.7
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 8.8e-08 62.8 111 36.0
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 3.7e-06 57.4 65 50.8


User provided reference genes

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