Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 5.1e-168 594.3 302 100.0
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 2.6e-164 582.0 302 98.0
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.2e-153 546.6 302 90.1
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 4.5e-140 501.5 301 82.1
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 7.6e-140 500.7 300 83.7
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 1.0e-139 500.4 301 82.4
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 8.4e-139 497.3 301 83.4
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 1.9e-138 496.1 304 82.6
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 3.2e-138 495.4 301 81.1
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 3.2e-138 495.4 301 81.1
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 3.9e-136 488.4 301 80.7
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 5.1e-136 488.0 301 81.1
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 5.1e-136 488.0 301 81.4
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.1e-135 486.9 301 79.1
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 1.1e-135 486.9 301 80.1
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 1.1e-135 486.9 301 80.4
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 1.5e-135 486.5 301 79.1
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 1.9e-135 486.1 301 79.4
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 1.9e-135 486.1 301 79.4
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 2.5e-135 485.7 300 79.7
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 3.3e-135 485.3 301 80.7
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 9.6e-135 483.8 299 79.9
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.3e-134 483.4 301 80.4
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 1.6e-134 483.0 300 80.0
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.1e-134 482.6 301 78.7
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 2.1e-134 482.6 301 78.7
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 6.2e-134 481.1 301 80.4
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 6.2e-134 481.1 301 80.4
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 6.2e-134 481.1 299 79.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 1.4e-133 479.9 301 79.7
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.4e-133 479.9 301 80.4
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.8e-133 479.6 301 78.4
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 3.1e-133 478.8 287 84.0
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 4.1e-133 478.4 301 80.1
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 4.1e-133 478.4 301 80.1
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 6.9e-133 477.6 300 78.3
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.2e-132 476.9 300 78.3
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 2.0e-132 476.1 301 78.4
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 2.6e-132 475.7 299 79.3
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 2.6e-132 475.7 301 78.1
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 3.4e-132 475.3 299 77.9
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 3.4e-132 475.3 301 77.7
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.5e-132 474.9 299 79.3
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.5e-132 474.9 299 79.3
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 4.5e-132 474.9 301 78.1
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 5.8e-132 474.6 300 77.7
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 7.6e-132 474.2 301 77.1
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 1.7e-131 473.0 301 77.4
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 2.2e-131 472.6 301 77.1
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.2e-131 472.6 299 78.6
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 5.0e-131 471.5 302 77.5
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 8.4e-131 470.7 300 78.0
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.5e-130 469.2 299 77.9
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.6e-129 466.5 301 77.1
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 2.7e-129 465.7 301 75.4
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 6.1e-129 464.5 301 76.1
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.0e-128 462.2 292 76.4
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.5e-127 459.9 300 74.0
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 7.4e-127 457.6 301 75.4
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 8.2e-126 454.1 303 73.9
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 2.6e-124 449.1 300 73.7
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 4.5e-124 448.4 303 73.6
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 7.7e-124 447.6 293 76.5
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 3.8e-123 445.3 300 73.0
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 5.0e-123 444.9 303 75.6
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 3.2e-122 442.2 301 70.8
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 5.5e-122 441.4 303 72.6
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 9.4e-122 440.7 304 73.4
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.6e-121 439.9 304 70.1
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 2.7e-121 439.1 304 73.4
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 1.8e-120 436.4 300 72.3
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 3.9e-120 435.3 301 71.8
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 5.1e-120 434.9 303 72.9
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 1.1e-119 433.7 300 71.3
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 1.5e-119 433.3 300 71.7
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 1.5e-119 433.3 300 71.7
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 2.0e-119 433.0 300 71.7
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 2.5e-119 432.6 300 71.0
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 2.5e-119 432.6 302 71.2
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 4.3e-119 431.8 300 71.3
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 5.7e-119 431.4 300 71.0
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 2.2e-118 429.5 300 71.0
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 4.8e-118 428.3 304 69.4
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 8.2e-118 427.6 275 78.2
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 1.1e-117 427.2 300 71.3
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.8e-117 426.4 300 70.3
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 2.4e-117 426.0 300 69.7
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.2e-116 423.7 300 69.3
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.5e-116 423.3 300 70.0
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 3.4e-116 422.2 311 68.8
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 7.7e-116 421.0 300 69.0
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 3.2e-114 415.6 300 68.7
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 3.2e-114 415.6 300 68.7
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 3.2e-114 415.6 300 68.7
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.2e-113 413.7 300 69.0
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 1.4e-109 400.2 249 78.3
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 1.2e-108 397.1 249 77.5
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 4.1e-101 372.1 302 63.2
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.2e-99 366.3 259 71.0
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 5.0e-99 365.2 225 79.6
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 4.2e-98 362.1 299 61.9
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 9.4e-98 360.9 227 78.0
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 4.7e-97 358.6 213 81.7
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 4.0e-96 355.5 305 59.0
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.4e-95 352.1 222 75.7
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 5.7e-95 351.7 235 74.0
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 7.5e-95 351.3 218 77.5
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 7.0e-93 344.7 255 66.3
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 1.2e-92 344.0 218 78.9
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 2.2e-91 339.7 249 66.3
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 5.4e-85 318.5 277 56.7
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 2.5e-82 309.7 301 58.1
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 1.5e-79 300.4 339 48.1
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 2.1e-73 280.0 173 76.9
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 1.2e-57 227.6 316 41.5
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.6e-47 193.4 163 60.7
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 5.8e-47 192.2 141 69.5
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 5.1e-43 179.1 301 40.2
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.1e-42 177.9 343 33.8
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 1.8e-40 170.6 177 49.2
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.2e-39 167.9 110 74.5
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.7e-30 137.5 88 72.7
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 1.6e-28 131.0 89 68.5
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 3.3e-26 123.2 91 67.0
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 1.3e-25 121.3 86 72.1
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 4.5e-23 112.8 350 29.4
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 6.5e-22 109.0 72 66.7
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 3.5e-20 103.2 138 45.7
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 1.5e-18 97.8 64 76.6
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.4e-16 91.3 67 58.2
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 9.3e-13 78.6 44 79.5


User provided reference genes

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