Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62012328 Chenopodium quinoa HOM05D004784 ORTHO05D005762 5.5e-242 840.5 408 100.0
AUR62022970 Chenopodium quinoa HOM05D004784 ORTHO05D005762 1.5e-239 832.4 408 98.8
Ah.14g087950 Amaranthus hybridus HOM05D004784 ORTHO05D005762 1.3e-222 776.2 406 91.1
Ah.09g234740 Amaranthus hybridus HOM05D004784 ORTHO05D005762 5.0e-219 764.2 409 89.7
EL10Ac6g15683 Beta vulgaris HOM05D004784 ORTHO05D005762 1.9e-218 762.3 449 82.4
Hund23455 Selenicereus undatus HOM05D004784 ORTHO05D005762 2.1e-217 758.8 406 88.9
Hund21422 Selenicereus undatus HOM05D004784 ORTHO05D005762 9.7e-215 750.0 406 87.9
Sc05g0009310 Simmondsia chinensis HOM05D004784 ORTHO05D005762 4.8e-214 747.7 407 88.0
Sc24g0000220 Simmondsia chinensis HOM05D004784 ORTHO05D005762 1.1e-213 746.5 406 87.4
FvH4_3g01820 Fragaria vesca HOM05D004784 ORTHO05D005762 7.0e-213 743.8 406 86.7
FAN25G0478 Fragaria x ananassa HOM05D004784 ORTHO05D005762 1.2e-212 743.0 406 86.7
Peaxi162Scf00131g01117 Petunia axillaris HOM05D004784 ORTHO05D005762 1.6e-212 742.7 407 86.5
RcHm_v2.0_Chr5g0002651 Rosa chinensis HOM05D004784 ORTHO05D005762 2.7e-212 741.9 406 86.5
Thecc.06G223500 Theobroma cacao HOM05D004784 ORTHO05D005762 4.5e-212 741.1 408 86.5
FAN21G1227 Fragaria x ananassa HOM05D004784 ORTHO05D005762 8.5e-211 736.9 406 86.2
COL.COLO4_31797 Corchorus olitorius HOM05D004784 ORTHO05D005762 3.2e-210 734.9 408 85.5
Migut.M01336 Erythranthe guttata HOM05D004784 ORTHO05D005762 3.2e-210 734.9 407 85.7
Duzib192G0808 Durio zibethinus HOM05D004784 ORTHO05D005762 4.2e-210 734.6 408 86.0
Nitab4.5_0002695g0040 Nicotiana tabacum HOM05D004784 ORTHO05D005762 4.2e-210 734.6 406 85.2
Aqoxy1G03119 Aquilegia oxysepala HOM05D004784 ORTHO05D005762 5.5e-210 734.2 406 85.0
Cc09_g01490 Coffea canephora HOM05D004784 ORTHO05D005762 5.5e-210 734.2 408 84.6
Lj1A1232G87 Lonicera japonica HOM05D004784 ORTHO05D005762 5.5e-210 734.2 404 85.6
QL05p072692 Quercus lobata HOM05D004784 ORTHO05D005762 7.2e-210 733.8 407 84.3
MELO3C002444.2 Cucumis melo HOM05D004784 ORTHO05D005762 9.4e-210 733.4 408 85.5
Gohir.A05G171500 Gossypium hirsutum HOM05D004784 ORTHO05D005762 9.4e-210 733.4 408 85.5
Sed0006727 Sechium edule HOM05D004784 ORTHO05D005762 9.4e-210 733.4 408 85.0
Gohir.D05G174600 Gossypium hirsutum HOM05D004784 ORTHO05D005762 1.2e-209 733.0 408 85.8
Nitab4.5_0007963g0010 Nicotiana tabacum HOM05D004784 ORTHO05D005762 1.2e-209 733.0 406 85.2
Manes.17G025900 Manihot esculenta HOM05D004784 ORTHO05D005762 3.6e-209 731.5 408 85.5
Solyc02g080810.3 Solanum lycopersicum HOM05D004784 ORTHO05D005762 6.1e-209 730.7 406 84.2
Prupe.4G018500 Prunus persica HOM05D004784 ORTHO05D005762 1.4e-208 729.6 409 84.8
Sed0013135 Sechium edule HOM05D004784 ORTHO05D005762 1.8e-208 729.2 408 84.6
Ca_21072_v3 Cicer arietinum L. HOM05D004784 ORTHO05D005762 2.3e-208 728.8 408 84.1
Dinv13913 Davidia involucrata HOM05D004784 ORTHO05D005762 2.3e-208 728.8 406 84.5
MSTRG.7197 Avicennia marina HOM05D004784 ORTHO05D005762 3.0e-208 728.4 406 84.7
CAN.G1014.12 Capsicum annuum HOM05D004784 ORTHO05D005762 3.0e-208 728.4 406 84.7
CsaV3_1G010620 Cucumis sativus L. HOM05D004784 ORTHO05D005762 3.0e-208 728.4 408 85.0
Dinv20065 Davidia involucrata HOM05D004784 ORTHO05D005762 3.0e-208 728.4 403 84.6
Gohir.A06G149200 Gossypium hirsutum HOM05D004784 ORTHO05D005762 3.0e-208 728.4 408 85.0
PGSC0003DMG400016444 Solanum tuberosum HOM05D004784 ORTHO05D005762 3.0e-208 728.4 406 83.7
Medtr4g132360 Medicago truncatula HOM05D004784 ORTHO05D005762 4.0e-208 728.0 408 84.3
TWI38G1114 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 4.0e-208 728.0 406 85.0
Rhsim13G0152700 Rhododendron simsii HOM05D004784 ORTHO05D005762 5.2e-208 727.6 409 85.6
ClCG03G004610 Citrullus lanatus HOM05D004784 ORTHO05D005762 6.8e-208 727.2 408 84.8
Oeu013835.1 Olea europaea HOM05D004784 ORTHO05D005762 6.8e-208 727.2 406 83.5
SalBow8G0639 Salvia bowleyana HOM05D004784 ORTHO05D005762 6.8e-208 727.2 406 85.7
Gorai.010G181500 Gossypium raimondii HOM05D004784 ORTHO05D005762 8.8e-208 726.9 408 84.8
Sopen02g025500 Solanum pennellii HOM05D004784 ORTHO05D005762 8.8e-208 726.9 406 83.5
CANSAT56G2555 Cannabis sativa HOM05D004784 ORTHO05D005762 1.2e-207 726.5 408 85.0
arahy.Tifrunner.gnm1.ann1.EH8QHL Arachis hypogaea HOM05D004784 ORTHO05D005762 1.5e-207 726.1 408 84.1
Oeu002744.1 Olea europaea HOM05D004784 ORTHO05D005762 1.5e-207 726.1 406 83.7
TWI63G0560 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 1.5e-207 726.1 406 84.5
Gohir.D06G155300 Gossypium hirsutum HOM05D004784 ORTHO05D005762 3.4e-207 724.9 408 84.6
TPR.G37066 Trifolium pratense HOM05D004784 ORTHO05D005762 3.4e-207 724.9 408 83.6
Eucgr.L02773 Eucalyptus grandis HOM05D004784 ORTHO05D005762 4.4e-207 724.5 406 84.7
CiPaw.09G093700 Carya illinoinensis HOM05D004784 ORTHO05D005762 7.5e-207 723.8 406 83.5
Hma1.2p1_0091F.1_g046500 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 7.5e-207 723.8 406 83.7
Glyma.09G004700 Glycine max HOM05D004784 ORTHO05D005762 9.8e-207 723.4 408 83.6
TAR629G2745 Trochodendron aralioides HOM05D004784 ORTHO05D005762 9.8e-207 723.4 406 83.5
CiPaw.10G073000 Carya illinoinensis HOM05D004784 ORTHO05D005762 1.3e-206 723.0 406 84.0
Phvul.003G080400 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 1.3e-206 723.0 408 84.1
VMungo1215G1817 Vigna mungo HOM05D004784 ORTHO05D005762 1.3e-206 723.0 408 84.8
AT1G11860 Arabidopsis thaliana HOM05D004784 ORTHO05D005762 1.7e-206 722.6 409 84.6
AL1G23030 Arabidopsis lyrata HOM05D004784 ORTHO05D005762 2.2e-206 722.2 409 84.4
Glyma.17G012000 Glycine max HOM05D004784 ORTHO05D005762 2.2e-206 722.2 408 83.8
Lalb_Chr18g0056491 Lupinus albus HOM05D004784 ORTHO05D005762 2.2e-206 722.2 406 84.2
QL02p099920 Quercus lobata HOM05D004784 ORTHO05D005762 2.8e-206 721.8 407 83.3
BolC8t52329H Brassica oleracea HOM05D004784 ORTHO05D005762 3.7e-206 721.5 409 84.4
MD10G1323700 Malus domestica HOM05D004784 ORTHO05D005762 3.7e-206 721.5 409 84.4
DCAR_008168 Daucus carota HOM05D004784 ORTHO05D005762 4.8e-206 721.1 421 83.1
Lj6g0010262 Lotus japonicus HOM05D004784 ORTHO05D005762 4.8e-206 721.1 408 83.6
A09p64310 Brassica napus HOM05D004784 ORTHO05D005762 6.3e-206 720.7 409 84.1
BraA09t41774Z Brassica rapa HOM05D004784 ORTHO05D005762 6.3e-206 720.7 409 84.1
C08p47920 Brassica napus HOM05D004784 ORTHO05D005762 1.4e-205 719.5 409 84.1
Thhalv10007781m.g Eutrema salsugineum HOM05D004784 ORTHO05D005762 2.4e-205 718.8 409 84.4
Glyma.07G262100 Glycine max HOM05D004784 ORTHO05D005762 2.4e-205 718.8 408 82.8
Potri.004G009600 Populus trichocarpa HOM05D004784 ORTHO05D005762 5.4e-205 717.6 406 83.3
THA.LOC104809494 Tarenaya hassleriana HOM05D004784 ORTHO05D005762 5.4e-205 717.6 409 84.1
Sp1g10470 Schrenkiella parvula HOM05D004784 ORTHO05D005762 9.1e-205 716.8 409 83.9
Carub.0001s1151 Capsella rubella HOM05D004784 ORTHO05D005762 1.2e-204 716.5 409 84.1
CARHR012170 Cardamine hirsuta HOM05D004784 ORTHO05D005762 1.2e-204 716.5 409 83.6
Hma1.2p1_0298F.1_g117720 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 1.2e-204 716.5 405 83.5
Cfa000202 Carpinus fangiana HOM05D004784 ORTHO05D005762 1.6e-204 716.1 406 83.0
Potri.011G006800 Populus trichocarpa HOM05D004784 ORTHO05D005762 1.6e-204 716.1 406 83.3
Haze_06821 Corylus avellana HOM05D004784 ORTHO05D005762 3.5e-204 714.9 406 82.8
Psat4g005920 Pisum sativum HOM05D004784 ORTHO05D005762 5.9e-204 714.1 409 82.9
Sabra11G0005900 Salix brachista HOM05D004784 ORTHO05D005762 5.9e-204 714.1 406 83.0
Aa31LG1G2870 Aethionema arabicum HOM05D004784 ORTHO05D005762 7.7e-204 713.8 409 83.4
Atru.chr10.2254 Acer truncatum HOM05D004784 ORTHO05D005762 1.3e-203 713.0 406 82.8
vmacro03682 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 1.7e-203 712.6 422 82.5
Lalb_Chr15g0087671 Lupinus albus HOM05D004784 ORTHO05D005762 2.9e-203 711.8 406 82.8
Glyma.15G109300 Glycine max HOM05D004784 ORTHO05D005762 3.8e-203 711.4 408 82.1
PGR142G1596 Punica granatum HOM05D004784 ORTHO05D005762 5.0e-203 711.1 408 82.8
BraA08t35239Z Brassica rapa HOM05D004784 ORTHO05D005762 6.6e-203 710.7 410 83.9
PSO541G3045 Papaver somniferum HOM05D004784 ORTHO05D005762 8.6e-203 710.3 407 81.3
PSO675G1799 Papaver somniferum HOM05D004784 ORTHO05D005762 1.1e-202 709.9 407 81.3
CDE05G1701 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 1.9e-202 709.1 408 82.1
MSTRG.14637 Avicennia marina HOM05D004784 ORTHO05D005762 3.3e-202 708.4 409 81.9
Nn1g03473 Nelumbo nucifera HOM05D004784 ORTHO05D005762 3.3e-202 708.4 450 76.0
C08p14960 Brassica napus HOM05D004784 ORTHO05D005762 4.2e-202 708.0 410 83.2
BolC8t49127H Brassica oleracea HOM05D004784 ORTHO05D005762 4.2e-202 708.0 410 83.2
unitig_92.g28113 Utricularia gibba HOM05D004784 ORTHO05D005762 7.2e-202 707.2 408 82.1
RhsimUnG0232700 Rhododendron simsii HOM05D004784 ORTHO05D005762 9.5e-202 706.8 452 77.4
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 4.7e-201 704.5 408 81.6
arahy.Tifrunner.gnm1.ann1.PLZ2LX Arachis hypogaea HOM05D004784 ORTHO05D005762 8.0e-201 703.7 398 83.7
CDE02G4424 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 8.0e-201 703.7 408 81.4
MBI02_g15378_MAGBIO Magnolia biondii HOM05D004784 ORTHO05D005762 4.0e-200 701.4 410 80.7
Ciclev10015433m.g Citrus clementina HOM05D004784 ORTHO05D005762 6.8e-200 700.7 410 81.2
SGA_v2.0_scaffold7G03812 Striga asiatica HOM05D004784 ORTHO05D005762 7.5e-199 697.2 433 78.3
vmacro22539 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 1.8e-197 692.6 473 73.4
Gorai.009G179900 Gossypium raimondii HOM05D004784 ORTHO05D005762 4.5e-196 688.0 385 85.2
Nn030s41595 Nelumbo nucifera HOM05D004784 ORTHO05D005762 3.8e-195 684.9 379 85.0
Lsat_1_v5_gn_7_16480 Lactuca sativa HOM05D004784 ORTHO05D005762 7.3e-194 680.6 387 83.5
ATR0794G107 Amborella trichopoda HOM05D004784 ORTHO05D005762 1.2e-193 679.9 417 78.7
Sabra04G0005000 Salix brachista HOM05D004784 ORTHO05D005762 1.2e-193 679.9 382 83.8
Oeu040336.3 Olea europaea HOM05D004784 ORTHO05D005762 4.0e-192 674.9 517 66.9
A08p33210 Brassica napus HOM05D004784 ORTHO05D005762 1.7e-190 669.5 410 80.2
GSVIVG01012702001 Vitis vinifera HOM05D004784 ORTHO05D005762 4.1e-189 664.8 358 87.4
HPP92_004130 Vanilla planifolia HOM05D004784 ORTHO05D005762 2.7e-188 662.1 410 75.9
HanXRQChr15g0470421 Helianthus annuus HOM05D004784 ORTHO05D005762 1.9e-186 656.0 356 87.6
SEGI_27497 Sequoiadendron giganteum HOM05D004784 ORTHO05D005762 1.7e-182 642.9 409 74.1
Os04g0623800 Oryza sativa ssp. japonica HOM05D004784 ORTHO05D005762 2.2e-182 642.5 379 79.4
BcaB03g13227 Brassica carinata HOM05D004784 ORTHO05D005762 3.7e-182 641.7 358 85.5
Zm00001eb070250 Zea mays HOM05D004784 ORTHO05D005762 8.3e-182 640.6 402 76.1
ECA236G1893 Erigeron canadensis HOM05D004784 ORTHO05D005762 2.5e-178 629.0 408 75.2
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 2.2e-174 615.9 412 71.8
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.1e-173 613.6 410 72.0
AagrBONN_evm.TU.Sc2ySwM_344.1952 Anthoceros agrestis HOM05D004784 ORTHO05D005762 4.6e-172 608.2 372 78.0
Mapoly0129s0024 Marchantia polymorpha HOM05D004784 ORTHO05D005762 3.3e-170 602.1 405 70.1
SMO352G0047 Selaginella moellendorffii HOM05D004784 ORTHO05D005762 9.6e-162 573.9 400 69.5
TAR627G1106 Trochodendron aralioides HOM05D004784 ORTHO05D005762 1.2e-161 573.5 317 84.2
A06p08340 Brassica napus HOM05D004784 ORTHO05D005762 6.2e-153 544.7 409 68.0
CSS0014504 Camellia sinensis var. sinensis HOM05D004784 ORTHO05D005762 7.1e-149 531.2 389 67.6
Cre03.g193750 Chlamydomonas reinhardtii HOM05D004784 ORTHO05D005762 5.8e-143 511.5 399 63.7
TAR626G0807 Trochodendron aralioides HOM05D004784 ORTHO05D005762 7.1e-141 504.6 337 72.7
Actinidia26902 Actinidia chinensis HOM05D004784 ORTHO05D005762 4.0e-136 488.8 329 74.2
PRCOL_00007041 Prasinoderma coloniale HOM05D004784 ORTHO05D005762 1.1e-125 454.1 368 62.0
MCO15G045 Micromonas commoda HOM05D004784 ORTHO05D005762 9.4e-125 451.1 385 57.9
Eucgr.E03909 Eucalyptus grandis HOM05D004784 ORTHO05D005762 2.1e-124 449.9 245 87.3
Atru.chr8.533 Acer truncatum HOM05D004784 ORTHO05D005762 5.3e-120 435.3 255 80.0
MD05G1348800 Malus domestica HOM05D004784 ORTHO05D005762 4.2e-109 399.1 238 79.4
Lalb_Chr20g0118761 Lupinus albus HOM05D004784 ORTHO05D005762 6.1e-108 395.2 227 80.6
BraA06t24032Z Brassica rapa HOM05D000911 ORTHO05D001266 5.0e-102 375.6 239 75.7
Cpa.g.sc152.29 Carica papaya HOM05D004784 ORTHO05D005762 3.5e-95 352.8 197 86.3
Cfa026602 Carpinus fangiana HOM05D004784 ORTHO05D005762 2.9e-78 296.6 404 44.1
Haze_26660 Corylus avellana HOM05D004784 ORTHO05D005762 2.0e-74 283.9 390 43.3
CBR_g24348 Chara braunii HOM05D004784 ORTHO05D005762 6.0e-71 272.3 180 75.6
Sopen07g011340 Solanum pennellii HOM05D004784 ORTHO05D005762 9.8e-66 255.0 180 68.3
EL10Ac1g01135 Beta vulgaris HOM05D004784 ORTHO05D005762 1.4e-64 251.1 141 84.4
EL10Ac2g03767 Beta vulgaris HOM05D004784 ORTHO05D005762 2.4e-64 250.4 140 85.0
Atru.chr8.531 Acer truncatum HOM05D004784 ORTHO05D005762 7.8e-55 218.8 130 77.7
Actinidia05506 Actinidia chinensis HOM05D004784 ORTHO05D005762 4.6e-47 193.0 104 89.4
Actinidia11861 Actinidia chinensis HOM05D004784 ORTHO05D005762 4.1e-19 100.1 58 70.7
Actinidia15969 Actinidia chinensis HOM05D004784 ORTHO05D058202 1.2e-15 88.6 128 42.2
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.2e-10 72.0 327 23.5


User provided reference genes

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