Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62011844 Chenopodium quinoa HOM05D005109 ORTHO05D006084 1.0e-163 580.1 307 100.0
EL10As5g23493 Beta vulgaris HOM05D005109 ORTHO05D006084 1.2e-105 387.1 339 66.4
Ah.11g049450 Amaranthus hybridus HOM05D005109 ORTHO05D006084 2.1e-89 333.2 337 60.2
Dinv34633 Davidia involucrata HOM05D005109 ORTHO05D006084 5.7e-74 282.0 314 54.8
GSVIVG01028346001 Vitis vinifera HOM05D005109 ORTHO05D006084 2.4e-72 276.6 300 59.0
QL09p039103 Quercus lobata HOM05D005109 ORTHO05D006084 9.3e-69 264.6 331 52.3
Eucgr.G01947 Eucalyptus grandis HOM05D005109 ORTHO05D006084 4.6e-68 262.3 324 51.2
Gohir.A08G190200 Gossypium hirsutum HOM05D005109 ORTHO05D006084 6.1e-68 261.9 321 51.4
Gohir.D08G208700 Gossypium hirsutum HOM05D005109 ORTHO05D006084 1.0e-67 261.2 321 51.7
Manes.13G034800 Manihot esculenta HOM05D005109 ORTHO05D006084 1.8e-67 260.4 322 51.2
Thecc.01G257200 Theobroma cacao HOM05D005109 ORTHO05D006084 3.9e-67 259.2 322 51.9
Oeu063313.1 Olea europaea HOM05D005109 ORTHO05D006084 5.1e-67 258.8 302 51.7
Eucgr.B01549 Eucalyptus grandis HOM05D005109 ORTHO05D006084 1.1e-66 257.7 324 50.6
Gorai.004G221100 Gossypium raimondii HOM05D005109 ORTHO05D006084 4.3e-66 255.8 318 51.6
Nn1g02784 Nelumbo nucifera HOM05D005109 ORTHO05D006084 4.3e-66 255.8 366 46.4
Ciclev10024128m.g Citrus clementina HOM05D005109 ORTHO05D006084 1.3e-65 254.2 353 47.9
CSS0032892 Camellia sinensis var. sinensis HOM05D005109 ORTHO05D006084 2.8e-65 253.1 302 52.0
MBI10_g20266_MAGBIO Magnolia biondii HOM05D005109 ORTHO05D006084 3.7e-65 252.7 311 51.4
Sabra02G0030500 Salix brachista HOM05D005109 ORTHO05D006084 1.8e-64 250.4 334 50.0
Hma1.2p1_0273F.1_g109610 Hydrangea macrophylla HOM05D005109 ORTHO05D006084 4.1e-64 249.2 313 49.8
Prupe.8G222600 Prunus persica HOM05D005109 ORTHO05D006084 4.1e-64 249.2 344 46.8
TWI18G0717 Tripterygium wilfordii HOM05D005109 ORTHO05D006084 5.3e-64 248.8 317 51.4
CsaV3_3G022220 Cucumis sativus L. HOM05D005109 ORTHO05D006084 2.0e-63 246.9 358 46.1
Potri.002G037800 Populus trichocarpa HOM05D005109 ORTHO05D006084 2.0e-63 246.9 331 49.5
Duzib211G0434 Durio zibethinus HOM05D005109 ORTHO05D006084 1.0e-62 244.6 319 49.2
Sc17g0000590 Simmondsia chinensis HOM05D005109 ORTHO05D006084 1.0e-62 244.6 383 45.2
MELO3C012881.2 Cucumis melo HOM05D005109 ORTHO05D006084 1.7e-62 243.8 355 46.8
Manes.12G033000 Manihot esculenta HOM05D005109 ORTHO05D006084 1.7e-62 243.8 325 48.9
Cpa.g.sc50.15 Carica papaya HOM05D005109 ORTHO05D006084 3.8e-62 242.7 365 46.3
Sed0018169 Sechium edule HOM05D005109 ORTHO05D006084 3.8e-62 242.7 343 48.7
Solyc09g025260.4 Solanum lycopersicum HOM05D005109 ORTHO05D006084 3.8e-62 242.7 316 47.2
ClCG07G001090 Citrullus lanatus HOM05D005109 ORTHO05D006084 6.5e-62 241.9 355 47.0
CANSAT01G1854 Cannabis sativa HOM05D005109 ORTHO05D006084 2.5e-61 240.0 341 47.8
TAR633G2233 Trochodendron aralioides HOM05D005109 ORTHO05D006084 2.5e-61 240.0 313 50.8
Duzib133G1173 Durio zibethinus HOM05D005109 ORTHO05D006084 3.2e-61 239.6 313 48.6
Duzib138G0302 Durio zibethinus HOM05D005109 ORTHO05D006084 3.2e-61 239.6 324 49.7
Peaxi162Scf01280g00016 Petunia axillaris HOM05D005109 ORTHO05D006084 1.2e-60 237.7 313 47.9
PSO210G5198 Papaver somniferum HOM05D005109 ORTHO05D006084 1.6e-60 237.3 337 46.6
PSO832G0134 Papaver somniferum HOM05D005109 ORTHO05D006084 1.6e-60 237.3 336 46.7
CiPaw.03G265200 Carya illinoinensis HOM05D005109 ORTHO05D006084 2.7e-60 236.5 345 44.6
Gorai.007G146600 Gossypium raimondii HOM05D005109 ORTHO05D006084 4.6e-60 235.7 304 50.7
Cc01_g18260 Coffea canephora HOM05D005109 ORTHO05D006084 6.1e-60 235.3 308 47.1
TWI12G1013 Tripterygium wilfordii HOM05D005109 ORTHO05D006084 3.0e-59 233.0 318 49.1
CAN.G1147.5 Capsicum annuum HOM05D005109 ORTHO05D006084 8.8e-59 231.5 318 46.9
Cfa002435 Carpinus fangiana HOM05D005109 ORTHO05D006084 8.8e-59 231.5 351 45.9
Gohir.D11G136900 Gossypium hirsutum HOM05D005109 ORTHO05D006084 8.8e-59 231.5 303 49.2
PGR031G1666 Punica granatum HOM05D005109 ORTHO05D006084 8.8e-59 231.5 316 48.7
Haze_24641 Corylus avellana HOM05D005109 ORTHO05D006084 1.1e-58 231.1 356 44.1
SalBow4G0920 Salvia bowleyana HOM05D005109 ORTHO05D006084 1.5e-58 230.7 319 49.5
Nitab4.5_0000470g0030 Nicotiana tabacum HOM05D005109 ORTHO05D006084 2.0e-58 230.3 357 44.5
DCAR_012551 Daucus carota HOM05D005109 ORTHO05D006084 5.7e-58 228.8 331 45.0
RcHm_v2.0_Chr6g0287941 Rosa chinensis HOM05D005109 ORTHO05D006084 7.4e-58 228.4 356 43.0
Migut.D00430 Erythranthe guttata HOM05D005109 ORTHO05D006084 9.7e-58 228.0 321 48.6
MSTRG.17494 Avicennia marina HOM05D005109 ORTHO05D006084 1.3e-57 227.6 317 46.4
Sopen09g028260 Solanum pennellii HOM05D005109 ORTHO05D006084 1.7e-57 227.3 319 46.1
Gohir.A11G131200 Gossypium hirsutum HOM05D005109 ORTHO05D006084 2.2e-57 226.9 303 48.8
Actinidia09543 Actinidia chinensis HOM05D005109 ORTHO05D006084 1.4e-56 224.2 317 46.1
PGSC0003DMG400010318 Solanum tuberosum HOM05D005109 ORTHO05D006084 1.8e-56 223.8 319 46.4
FAN15G3301 Fragaria x ananassa HOM05D005109 ORTHO05D006084 3.1e-56 223.0 343 44.0
FAN20G2708 Fragaria x ananassa HOM05D005109 ORTHO05D006084 1.2e-55 221.1 338 44.4
FAN24G2940 Fragaria x ananassa HOM05D005109 ORTHO05D006084 1.5e-55 220.7 349 42.4
COL.COLO4_03875 Corchorus olitorius HOM05D005109 ORTHO05D006084 2.0e-55 220.3 325 47.7
FvH4_2g21350 Fragaria vesca HOM05D005109 ORTHO05D006084 3.4e-55 219.5 349 42.1
Sed0014438 Sechium edule HOM05D005109 ORTHO05D006084 5.9e-55 218.8 363 43.3
Migut.N02209 Erythranthe guttata HOM05D005109 ORTHO05D006084 1.0e-54 218.0 291 49.1
MD10G1183500 Malus domestica HOM05D005109 ORTHO05D006084 1.3e-54 217.6 351 41.3
MD05G1196200 Malus domestica HOM05D005109 ORTHO05D006084 2.2e-54 216.9 350 43.1
VMungo0720G0144 Vigna mungo HOM05D005109 ORTHO05D006084 2.9e-54 216.5 317 46.1
ATR0736G115 Amborella trichopoda HOM05D005109 ORTHO05D006084 2.5e-53 213.4 334 45.2
Glyma.10G037400 Glycine max HOM05D005109 ORTHO05D006084 4.2e-53 212.6 319 46.1
Aqoxy5G00221 Aquilegia oxysepala HOM05D005109 ORTHO05D006084 7.2e-53 211.8 342 44.4
THA.LOC104826217 Tarenaya hassleriana HOM05D005109 ORTHO05D006084 2.1e-52 210.3 328 45.7
ECA236G0222 Erigeron canadensis HOM05D005109 ORTHO05D006084 1.4e-51 207.6 312 45.2
HanXRQChr04g0110521 Helianthus annuus HOM05D005109 ORTHO05D006084 1.4e-51 207.6 305 46.6
Lj5g0011614 Lotus japonicus HOM05D005109 ORTHO05D006084 1.8e-51 207.2 321 46.1
Sabra05G0173800 Salix brachista HOM05D005109 ORTHO05D006084 1.8e-51 207.2 326 46.3
arahy.Tifrunner.gnm1.ann1.A1W3C7 Arachis hypogaea HOM05D005109 ORTHO05D006084 2.3e-51 206.8 330 44.5
arahy.Tifrunner.gnm1.ann1.ZTJ4VR Arachis hypogaea HOM05D005109 ORTHO05D006084 3.0e-51 206.5 330 44.5
Phvul.007G192400 Phaseolus vulgaris HOM05D005109 ORTHO05D006084 3.9e-51 206.1 318 45.6
Lalb_Chr21g0313891 Lupinus albus HOM05D005109 ORTHO05D006084 8.8e-51 204.9 342 41.5
Glyma.13G124000 Glycine max HOM05D005109 ORTHO05D006084 1.1e-50 204.5 319 45.8
Nitab4.5_0005001g0040 Nicotiana tabacum HOM05D005109 ORTHO05D006084 2.6e-50 203.4 236 51.7
Sp1g05000 Schrenkiella parvula HOM05D005109 ORTHO05D006084 3.7e-49 199.5 344 45.1
Medtr1g069855 Medicago truncatula HOM05D005109 ORTHO05D006084 4.5e-47 192.6 316 44.0
Lalb_Chr02g0152441 Lupinus albus HOM05D005109 ORTHO05D006084 7.7e-47 191.8 343 41.4
DCAR_018491 Daucus carota HOM05D005109 ORTHO05D006084 2.2e-46 190.3 318 41.8
THA.LOC104800869 Tarenaya hassleriana HOM05D005109 ORTHO05D006084 2.2e-46 190.3 340 42.6
Carub.0001s0555 Capsella rubella HOM05D005109 ORTHO05D006084 2.9e-46 189.9 361 41.3
Lalb_Chr06g0170501 Lupinus albus HOM05D005109 ORTHO05D006084 5.0e-46 189.1 379 39.6
Potri.005G225200 Populus trichocarpa HOM05D005109 ORTHO05D006084 6.5e-46 188.7 329 43.2
TPR.G18473 Trifolium pratense HOM05D005109 ORTHO05D006084 8.5e-46 188.3 328 43.0
BcaC01g05971 Brassica carinata HOM05D005109 ORTHO05D006084 1.1e-45 188.0 325 44.0
C03p20590 Brassica napus HOM05D005109 ORTHO05D006084 1.1e-45 188.0 325 44.0
BolC3t14465H Brassica oleracea HOM05D005109 ORTHO05D006084 1.1e-45 188.0 325 44.0
unitig_8.g3734 Utricularia gibba HOM05D005109 ORTHO05D006084 7.2e-45 185.3 294 45.9
Ca_28090_v3 Cicer arietinum L. HOM05D005109 ORTHO05D006084 1.6e-44 184.1 319 43.3
BcaC01g05975 Brassica carinata HOM05D005109 ORTHO05D006084 4.7e-44 182.6 324 43.5
C03p20550 Brassica napus HOM05D005109 ORTHO05D006084 4.7e-44 182.6 324 43.5
BolC3t14435H Brassica oleracea HOM05D005109 ORTHO05D006084 4.7e-44 182.6 324 43.5
AT1G06190 Arabidopsis thaliana HOM05D005109 ORTHO05D006084 6.1e-44 182.2 354 39.5
BcaC05g24297 Brassica carinata HOM05D005109 ORTHO05D006084 6.1e-44 182.2 338 41.4
C05p04510 Brassica napus HOM05D005109 ORTHO05D006084 6.1e-44 182.2 338 41.4
Atru.chr5.1705 Acer truncatum HOM05D005109 ORTHO05D006084 1.0e-43 181.4 308 43.8
CARHR005720 Cardamine hirsuta HOM05D005109 ORTHO05D006084 1.0e-43 181.4 357 40.6
Aa31LG5G5770 Aethionema arabicum HOM05D005109 ORTHO05D006084 2.3e-43 180.3 340 41.8
BolC5t29222H Brassica oleracea HOM05D005109 ORTHO05D006084 2.3e-43 180.3 347 40.9
CARHR124750 Cardamine hirsuta HOM05D005109 ORTHO05D006084 2.3e-43 180.3 342 42.4
BcaB02g06816 Brassica carinata HOM05D005109 ORTHO05D006084 8.8e-43 178.3 354 41.8
Sp4g13630 Schrenkiella parvula HOM05D005109 ORTHO05D006084 5.7e-42 175.6 335 42.1
BcaB01g04060 Brassica carinata HOM05D005109 ORTHO05D006084 7.5e-42 175.3 332 41.6
A10p04820 Brassica napus HOM05D005109 ORTHO05D006084 7.5e-42 175.3 355 40.0
BraA10t42751Z Brassica rapa HOM05D005109 ORTHO05D006084 7.5e-42 175.3 355 40.0
Actinidia07301 Actinidia chinensis HOM05D005109 ORTHO05D006084 1.7e-41 174.1 195 50.8
Psat6g041760 Pisum sativum HOM05D005109 ORTHO05D006084 1.6e-39 167.5 322 42.5
AL163U10030 Arabidopsis lyrata HOM05D005109 ORTHO05D006084 5.9e-39 165.6 362 39.2
A03p17410 Brassica napus HOM05D005109 ORTHO05D006084 5.9e-39 165.6 326 41.7
BraA03t11013Z Brassica rapa HOM05D005109 ORTHO05D006084 5.9e-39 165.6 326 41.7
Aa31LG1G7210 Aethionema arabicum HOM05D005109 ORTHO05D006084 5.0e-38 162.5 349 37.5
SGA_v2.0_scaffold1G00618 Striga asiatica HOM05D003989 ORTHO05D004626 7.2e-37 158.7 312 40.1
Dinv33475 Davidia involucrata HOM05D005109 ORTHO05D006084 1.2e-36 157.9 127 66.9
Cc05_g01680 Coffea canephora HOM05D005109 ORTHO05D006084 4.7e-36 156.0 165 54.5
Glyma.03G163800 Glycine max HOM05D005109 ORTHO05D006084 8.0e-36 155.2 306 42.8
Os03g0183100 Oryza sativa ssp. japonica HOM05D005109 ORTHO05D006084 8.0e-36 155.2 343 36.2
Thhalv10016746m.g Eutrema salsugineum HOM05D005109 ORTHO05D006084 1.0e-35 154.8 347 38.0
Glyma.19G165100 Glycine max HOM05D005109 ORTHO05D006084 1.8e-35 154.1 250 44.0
Zm00001eb258380 Zea mays HOM05D005109 ORTHO05D006084 3.0e-35 153.3 343 36.4
vmacro02668 Vaccinium macrocarpon HOM05D005109 ORTHO05D006084 1.5e-34 151.0 327 38.5
COL.COLO4_04035 Corchorus olitorius HOM05D005109 ORTHO05D006084 1.1e-32 144.8 263 41.4
Thhalv10007829m.g Eutrema salsugineum HOM05D005109 ORTHO05D006084 1.6e-31 141.0 343 38.2
SGA_v2.0_scaffold138G35226 Striga asiatica HOM05D003989 ORTHO05D004626 5.0e-30 136.0 323 35.3
Actinidia30161 Actinidia chinensis HOM05D005109 ORTHO05D006084 6.5e-30 135.6 232 44.0
AL4G26340 Arabidopsis lyrata HOM05D005109 ORTHO05D006084 1.2e-28 131.3 354 34.5
Rhsim13G0035600 Rhododendron simsii HOM05D005109 ORTHO05D006084 1.8e-27 127.5 322 34.5
Psat0s1200g0040 Pisum sativum HOM05D005109 ORTHO05D006084 3.7e-25 119.8 210 41.4
HPP92_012858 Vanilla planifolia HOM05D005109 ORTHO05D006084 4.9e-25 119.4 326 35.0
AL1G16170 Arabidopsis lyrata HOM05D005109 ORTHO05D006084 1.4e-24 117.9 354 33.9
Lj1C67T4 Lonicera japonica HOM05D005109 ORTHO05D006084 2.4e-24 117.1 289 37.7
Rhsim01G0262800 Rhododendron simsii HOM05D005109 ORTHO05D006084 2.8e-20 103.6 174 42.0
Hund00596 Selenicereus undatus HOM05D005109 ORTHO05D006084 1.4e-19 101.3 144 49.3
AT2G31150 Arabidopsis thaliana HOM05D005109 ORTHO05D006084 1.8e-19 100.9 238 39.9
CDE02G3939 Ceratophyllum demersum HOM05D005109 ORTHO05D006084 1.8e-16 90.9 257 31.1
Migut.M01016 Erythranthe guttata HOM05D008010 ORTHO05D010085 7.5e-10 68.9 217 30.4
Peaxi162Scf00371g00017 Petunia axillaris HOM05D008010 ORTHO05D010085 8.3e-09 65.5 216 31.5
PGR031G1466 Punica granatum HOM05D008010 ORTHO05D010085 1.4e-08 64.7 206 32.5
FAN16G3557 Fragaria x ananassa HOM05D008010 ORTHO05D010085 9.2e-08 62.0 194 32.0
Cc02_g15430 Coffea canephora HOM05D008010 ORTHO05D010085 1.6e-07 61.2 189 30.7
Haze_06192 Corylus avellana HOM05D008010 ORTHO05D010085 1.6e-07 61.2 188 32.4
Actinidia25795 Actinidia chinensis HOM05D005109 ORTHO05D006084 3.5e-07 60.1 137 35.0
Cfa000638 Carpinus fangiana HOM05D008010 ORTHO05D010085 3.5e-07 60.1 188 33.0
Actinidia37514 Actinidia chinensis HOM05D000378 ORTHO05D006084 6.0e-07 59.3 172 34.9
Cpa.g.c44470 Carica papaya HOM05D005109 ORTHO05D006084 7.8e-07 58.9 40 80.0
MD05G1297000 Malus domestica HOM05D008010 ORTHO05D010085 1.0e-06 58.5 210 29.5
FAN25G1163 Fragaria x ananassa HOM05D008010 ORTHO05D010085 1.7e-06 57.8 232 28.9
Lsat_1_v5_gn_1_109280 Lactuca sativa HOM05D008010 ORTHO05D010085 3.9e-06 56.6 187 29.4
Manes.16G041900 Manihot esculenta HOM05D008010 ORTHO05D010085 3.9e-06 56.6 193 29.0
DCAR_027988 Daucus carota HOM05D008010 ORTHO05D010085 5.0e-06 56.2 235 28.1
Nitab4.5_0008462g0010 Nicotiana tabacum HOM05D008010 ORTHO05D010085 6.6e-06 55.8 210 30.5
EL10As5g23492 Beta vulgaris HOM05D005109 ORTHO05D006084 8.6e-06 55.5 58 58.6
CiPaw.09G071800 Carya illinoinensis HOM05D008010 ORTHO05D010085 8.6e-06 55.5 205 30.2


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