Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 1.2e-227 792.7 383 100.0
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 2.8e-171 605.5 383 77.8
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 9.6e-164 580.5 386 74.4
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 1.3e-141 506.9 386 65.0
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 1.2e-137 493.8 374 66.0
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 2.2e-136 489.6 366 66.4
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 8.5e-136 487.6 389 64.0
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 1.4e-135 486.9 380 63.9
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 2.1e-134 483.0 386 63.2
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 5.7e-132 474.9 379 63.1
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.3e-131 473.8 359 64.9
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 2.8e-131 472.6 334 68.9
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 5.3e-130 468.4 375 62.7
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 1.3e-128 463.8 403 58.6
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 1.3e-128 463.8 387 60.5
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 1.7e-128 463.4 388 60.6
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 1.1e-127 460.7 380 62.4
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 3.2e-127 459.1 383 61.4
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 5.5e-127 458.4 386 59.1
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 2.1e-126 456.4 381 61.4
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 2.7e-126 456.1 378 60.6
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.7e-126 456.1 381 61.4
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 3.6e-126 455.7 291 79.7
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 4.7e-126 455.3 346 64.7
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 4.7e-126 455.3 338 64.2
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 7.9e-126 454.5 338 64.5
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 1.0e-125 454.1 381 60.4
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 1.8e-125 453.4 360 61.1
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 2.3e-125 453.0 388 58.8
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 2.3e-125 453.0 347 62.5
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 3.0e-125 452.6 389 59.1
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 3.0e-125 452.6 376 60.1
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 5.1e-125 451.8 332 66.0
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 6.7e-125 451.4 364 61.8
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 6.7e-125 451.4 338 64.8
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 8.8e-125 451.1 394 58.6
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 2.0e-124 449.9 366 62.6
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 2.6e-124 449.5 346 61.3
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 2.6e-124 449.5 344 65.7
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 3.3e-124 449.1 388 58.5
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 2.2e-123 446.4 374 60.2
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.8e-123 446.0 381 60.6
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 3.7e-123 445.7 342 64.6
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.7e-123 445.7 342 64.0
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 4.8e-123 445.3 394 57.6
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 6.3e-123 444.9 395 57.0
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 1.8e-122 443.4 338 63.6
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.4e-122 443.0 347 63.7
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 5.3e-122 441.8 376 60.6
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 9.1e-122 441.0 369 61.5
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.2e-121 440.7 387 58.7
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 2.0e-121 439.9 379 60.9
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.0e-121 439.9 342 63.7
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 3.5e-121 439.1 383 59.5
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 4.5e-121 438.7 339 65.5
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 7.7e-121 438.0 385 58.4
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.0e-120 437.6 339 62.5
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 2.9e-120 436.0 352 61.9
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 3.8e-120 435.6 372 61.0
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 5.0e-120 435.3 389 57.6
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 5.0e-120 435.3 389 57.6
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 1.9e-119 433.3 383 58.7
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 2.5e-119 433.0 381 59.8
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 3.2e-119 432.6 365 61.1
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 4.2e-119 432.2 387 58.1
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 7.2e-119 431.4 404 56.9
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 2.1e-118 429.9 337 62.0
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 2.7e-118 429.5 364 62.1
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 1.4e-117 427.2 341 62.5
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.4e-117 427.2 378 57.9
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 1.8e-117 426.8 369 58.8
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 2.3e-117 426.4 389 56.8
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 4.0e-117 425.6 340 60.3
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 5.2e-117 425.2 379 59.6
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 2.0e-116 423.3 391 57.0
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 7.5e-116 421.4 347 61.4
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 1.3e-115 420.6 372 59.4
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 1.8e-114 416.8 373 59.0
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 5.3e-114 415.2 376 57.4
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 1.2e-113 414.1 383 57.4
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.2e-113 414.1 357 59.4
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 2.7e-113 412.9 373 56.3
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 2.7e-113 412.9 332 61.4
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 4.5e-113 412.1 340 60.9
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 1.0e-112 411.0 341 59.5
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 1.1e-111 407.5 317 65.9
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 5.5e-111 405.2 298 66.1
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 7.2e-111 404.8 341 58.9
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 9.4e-111 404.4 382 53.4
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 1.2e-110 404.1 312 62.5
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 4.7e-110 402.1 347 57.3
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 3.0e-109 399.4 309 66.0
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 2.0e-108 396.7 327 60.9
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.0e-108 396.7 404 54.0
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 1.3e-107 394.0 293 64.8
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 6.3e-107 391.7 287 66.2
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 2.7e-105 386.3 341 58.9
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 7.7e-105 384.8 376 55.3
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 1.0e-101 374.4 384 52.1
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 1.4e-101 374.0 366 52.2
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 2.2e-99 366.7 376 52.4
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 6.6e-96 355.1 352 55.1
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 8.6e-96 354.8 327 57.5
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 1.1e-95 354.4 301 59.1
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 3.4e-92 342.8 320 53.8
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 2.0e-89 333.6 409 47.4
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 3.5e-89 332.8 320 52.5
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 1.7e-88 330.5 335 52.5
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 4.0e-85 319.3 386 47.4
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 1.9e-82 310.5 325 48.3
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 3.9e-80 302.8 309 50.5
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 6.0e-73 278.9 239 59.8
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 3.9e-72 276.2 316 46.2
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 3.6e-70 269.6 234 56.4
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 3.3e-63 246.5 228 53.9
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 2.1e-62 243.8 303 39.3
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 3.8e-59 233.0 308 42.2
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 3.8e-59 233.0 314 39.2
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 9.9e-52 208.4 312 40.7
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 2.3e-48 197.2 129 72.9
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 5.1e-40 169.5 90 86.7
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 2.9e-35 153.7 146 50.0
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 1.1e-31 141.7 86 75.6
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 3.0e-24 117.1 214 33.6
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 6.3e-22 109.4 68 72.1
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 6.9e-13 79.3 101 45.5
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 4.7e-09 66.6 42 66.7
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.5e-07 61.6 51 52.9
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 3.3e-07 60.5 69 46.4


User provided reference genes

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