Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 7.0e-101 370.5 179 100.0
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 3.3e-90 335.1 174 93.7
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 5.8e-79 297.7 169 84.6
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 2.4e-77 292.4 167 82.6
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 8.7e-67 257.3 163 74.8
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.1e-66 256.9 163 75.5
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 4.3e-66 255.0 163 74.2
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 5.6e-66 254.6 163 73.6
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 1.6e-65 253.1 163 74.8
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 1.6e-65 253.1 163 74.8
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 2.1e-65 252.7 163 74.2
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 4.8e-65 251.5 163 76.1
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 6.2e-65 251.1 163 74.2
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 8.1e-65 250.8 163 73.0
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 1.4e-64 250.0 163 71.2
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 2.4e-64 249.2 163 75.5
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 3.1e-64 248.8 162 74.1
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 6.9e-64 247.7 163 73.0
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 6.9e-64 247.7 163 73.0
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 1.2e-63 246.9 163 72.4
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 3.4e-63 245.4 164 73.2
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 2.2e-62 242.7 173 65.9
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 6.5e-62 241.1 163 71.2
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 6.5e-62 241.1 163 71.2
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 6.5e-62 241.1 171 69.6
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 6.5e-62 241.1 163 70.6
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 1.1e-61 240.4 163 71.8
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 1.1e-61 240.4 163 71.2
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 1.9e-61 239.6 155 74.2
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 1.9e-61 239.6 155 74.2
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 1.9e-61 239.6 163 71.8
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 5.5e-61 238.0 163 71.2
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 6.0e-60 234.6 163 69.3
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 2.3e-59 232.6 164 67.7
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 3.0e-59 232.3 164 69.5
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 5.1e-59 231.5 163 69.3
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 5.1e-59 231.5 163 69.9
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 5.1e-59 231.5 163 69.9
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 5.1e-59 231.5 165 70.3
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 6.7e-59 231.1 162 72.2
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 1.9e-58 229.6 198 58.6
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 4.3e-58 228.4 176 66.5
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 7.4e-58 227.6 163 68.7
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 7.4e-58 227.6 164 67.7
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 9.6e-58 227.3 166 69.3
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 8.2e-57 224.2 163 66.3
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 1.1e-56 223.8 164 66.5
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 1.8e-56 223.0 155 70.3
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 1.8e-56 223.0 164 67.1
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 9.0e-56 220.7 164 66.5
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 1.2e-55 220.3 163 66.3
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 2.0e-55 219.5 155 69.0
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 2.0e-55 219.5 163 65.6
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 5.8e-55 218.0 164 66.5
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 5.8e-55 218.0 163 65.0
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 2.2e-54 216.1 172 63.4
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 2.9e-54 215.7 163 65.6
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 2.9e-54 215.7 155 68.4
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 6.5e-54 214.5 163 63.8
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 1.1e-53 213.8 164 65.2
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 4.2e-53 211.8 167 63.5
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 4.2e-53 211.8 163 65.0
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 2.1e-52 209.5 164 62.2
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 2.7e-52 209.1 163 64.4
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 4.6e-52 208.4 172 60.5
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 7.9e-52 207.6 161 65.8
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.3e-51 206.8 163 64.4
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 1.8e-51 206.5 175 60.0
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 6.7e-51 204.5 163 63.2
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 6.7e-51 204.5 171 59.6
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 6.7e-51 204.5 163 63.2
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 6.7e-51 204.5 163 63.2
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 1.1e-50 203.8 163 63.2
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 1.1e-50 203.8 163 63.2
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 1.9e-50 203.0 163 61.3
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 4.3e-50 201.8 163 62.0
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 5.7e-50 201.4 163 61.3
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 5.7e-50 201.4 163 61.3
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 5.7e-50 201.4 163 58.9
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 7.4e-50 201.1 163 62.0
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 9.7e-50 200.7 163 62.6
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 1.3e-49 200.3 164 61.0
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 4.8e-49 198.4 164 59.1
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 4.8e-49 198.4 165 61.2
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 4.8e-49 198.4 165 61.2
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 4.8e-49 198.4 165 61.2
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 6.3e-49 198.0 163 62.0
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 1.1e-48 197.2 125 76.8
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 1.4e-48 196.8 163 60.1
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 2.0e-47 193.0 165 61.2
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 2.6e-47 192.6 169 59.2
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 2.2e-46 189.5 120 74.2
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 6.5e-46 188.0 164 56.7
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 9.4e-45 184.1 163 55.8
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 1.1e-42 177.2 173 53.2
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 4.3e-42 175.3 165 57.6
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 3.1e-40 169.1 164 54.9
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 5.0e-38 161.8 113 66.4
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 1.2e-36 157.1 180 48.9
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 4.7e-36 155.2 180 49.4
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 5.7e-34 148.3 163 46.6
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 1.8e-32 143.3 174 43.1
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 3.2e-29 132.5 166 44.0
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-28 130.2 177 44.1
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 1.0e-27 127.5 177 44.1
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 2.3e-27 126.3 178 40.4
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 5.2e-27 125.2 113 60.2
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 2.0e-26 123.2 101 58.4
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 2.6e-26 122.9 171 42.1
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 9.7e-26 120.9 176 40.3
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-25 120.6 165 44.2
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 6.3e-25 118.2 192 35.9
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-23 113.6 175 44.6
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 7.7e-23 111.3 204 35.3
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 1.0e-22 110.9 67 73.1
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 2.2e-22 109.8 113 50.4
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 3.2e-21 105.9 71 74.6
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 1.4e-19 100.5 108 51.9
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 4.0e-19 99.0 157 36.3
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 5.2e-19 98.6 166 36.7
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 5.2e-19 98.6 135 39.3
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.2e-18 97.4 165 32.7
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 1.5e-18 97.1 181 34.8
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-18 95.9 177 32.8
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 2.2e-17 93.2 72 65.3
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 2.8e-17 92.8 141 34.0
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 3.7e-17 92.4 183 32.8
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 9.1e-16 87.8 166 31.9
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 1.2e-15 87.4 159 35.2
Atru.chr7.1970 Acer truncatum HOM05D004737 ORTHO05D005623 2.0e-15 86.7 146 34.9
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 2.0e-15 86.7 103 46.6
Atru.chr4.1970 Acer truncatum HOM05D004737 ORTHO05D005623 3.5e-15 85.9 166 31.3
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 3.5e-15 85.9 71 62.0
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 4.5e-15 85.5 156 33.3
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 2.2e-14 83.2 171 27.5
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 8.5e-14 81.3 175 31.4
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-13 80.5 166 30.7
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-13 80.5 114 45.6
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 1.9e-13 80.1 127 36.2
Atru.chr5.3478 Acer truncatum HOM05D004737 ORTHO05D005623 4.2e-13 79.0 124 34.7
Atru.chr7.1971 Acer truncatum HOM05D004737 ORTHO05D005623 5.5e-13 78.6 132 34.1
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 7.2e-13 78.2 111 43.2
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 1.8e-11 73.6 171 30.4
Atru.chr8.1290 Acer truncatum HOM05D004737 ORTHO05D005623 4.0e-11 72.4 129 30.2
Atru.chr1.4012 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-10 70.5 186 29.6
Atru.chr3.997 Acer truncatum HOM05D004737 ORTHO05D005623 9.8e-10 67.8 129 31.0
Atru.chr5.2738 Acer truncatum HOM05D004737 ORTHO05D005623 9.8e-10 67.8 183 27.9
QL12p033469 Quercus lobata HOM05D004737 ORTHO05D005623 1.3e-09 67.4 38 78.9
Atru.chr1.4019 Acer truncatum HOM05D002880 ORTHO05D005623 2.2e-09 66.6 108 33.3
Atru.chr12.1697 Acer truncatum HOM05D004737 ORTHO05D005623 2.2e-09 66.6 159 27.7
Atru.chr12.1688 Acer truncatum HOM05D004737 ORTHO05D005623 3.7e-09 65.9 131 29.8
Ah.12g060480 Amaranthus hybridus HOM05D002606 ORTHO05D015240 9.1e-08 61.2 32 78.1
Medtr5g038850 Medicago truncatula HOM05D004737 ORTHO05D005623 4.5e-07 58.9 129 32.6


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