Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 1.2e-310 1068.9 536 100.0
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 1.1e-226 790.0 504 78.8
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 6.4e-214 747.7 497 74.6
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 3.6e-201 705.3 512 71.7
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 2.8e-185 652.5 522 64.0
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 4.4e-183 645.2 506 63.4
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 4.4e-183 645.2 506 63.4
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 4.2e-181 638.6 501 66.1
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 6.0e-180 634.8 512 62.7
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 7.8e-180 634.4 506 63.2
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 1.0e-179 634.0 507 63.9
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 8.7e-179 630.9 504 63.5
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 1.1e-178 630.6 509 63.1
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 3.3e-178 629.0 504 64.1
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 7.3e-178 627.9 511 62.2
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 3.6e-177 625.5 504 62.5
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 3.1e-176 622.5 505 64.0
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 3.1e-176 622.5 510 63.3
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 3.1e-176 622.5 547 59.0
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 5.3e-176 621.7 507 62.5
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 9.0e-176 620.9 505 64.2
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.0e-175 619.8 507 61.7
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 1.3e-174 617.1 525 60.4
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 4.9e-174 615.1 506 62.6
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 8.4e-174 614.4 499 62.5
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 1.1e-173 614.0 527 60.5
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 1.9e-173 613.2 507 62.3
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 2.4e-173 612.8 509 61.1
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 4.2e-173 612.1 504 61.3
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.1e-172 609.8 504 60.7
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 2.7e-172 609.4 507 62.1
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 2.7e-172 609.4 511 60.5
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 2.3e-171 606.3 507 60.4
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 3.9e-171 605.5 510 60.6
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 3.9e-171 605.5 507 60.6
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 5.3e-168 595.1 539 58.6
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 4.5e-167 592.0 509 59.5
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 9.9e-167 590.9 514 60.3
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 6.4e-166 588.2 510 59.4
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 6.4e-166 588.2 504 60.3
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 8.4e-166 587.8 517 60.3
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 9.3e-165 584.3 517 60.0
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 1.0e-163 580.9 506 58.5
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 1.3e-163 580.5 509 58.7
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 1.8e-163 580.1 499 59.1
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.3e-163 579.7 527 58.6
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 5.1e-163 578.6 504 57.3
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 1.9e-162 576.6 510 59.6
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 7.4e-162 574.7 513 58.7
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 7.4e-162 574.7 483 60.5
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 1.6e-161 573.5 511 58.9
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 3.7e-161 572.4 483 60.0
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 4.8e-161 572.0 499 59.1
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 1.8e-160 570.1 482 60.4
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 3.1e-160 569.3 504 58.3
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 3.1e-160 569.3 507 59.6
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 9.0e-160 567.8 483 59.2
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 2.0e-159 566.6 501 59.3
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 5.8e-159 565.1 511 58.9
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 7.6e-159 564.7 499 58.7
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 6.5e-158 561.6 509 60.1
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 1.1e-157 560.8 530 57.9
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 1.4e-157 560.5 504 57.3
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 3.5e-156 555.8 507 57.8
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 6.0e-156 555.1 505 59.4
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.0e-155 554.3 486 59.5
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 1.8e-155 553.5 509 56.0
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 3.9e-155 552.4 498 57.4
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 5.1e-155 552.0 505 56.2
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 8.7e-155 551.2 498 57.6
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 6.3e-153 545.0 515 55.1
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 1.1e-152 544.3 511 55.2
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 1.4e-152 543.9 509 57.6
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 5.3e-152 542.0 505 56.6
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 6.9e-152 541.6 509 58.0
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 1.2e-151 540.8 510 55.1
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 7.6e-151 538.1 499 57.7
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 2.5e-149 533.1 504 56.3
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 4.2e-149 532.3 503 55.7
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 5.5e-149 531.9 501 55.1
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 2.7e-148 529.6 510 56.1
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 1.8e-147 526.9 498 55.4
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 1.5e-146 523.9 501 55.1
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 1.5e-146 523.9 506 55.3
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 1.9e-146 523.5 501 54.7
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 1.9e-146 523.5 501 54.7
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 1.9e-146 523.5 524 55.3
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 7.4e-146 521.5 494 56.9
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 2.2e-145 520.0 501 54.5
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 2.8e-145 519.6 503 55.1
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 8.5e-142 508.1 497 54.9
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 1.1e-141 507.7 495 53.5
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 2.6e-135 486.5 472 55.3
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 1.7e-134 483.8 511 50.3
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 6.5e-134 481.9 531 50.7
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 6.5e-134 481.9 531 50.7
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 6.7e-123 445.3 545 46.2
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 8.8e-123 444.9 341 66.0
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 4.4e-122 442.6 534 46.3
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 3.7e-121 439.5 496 50.8
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 1.0e-115 421.4 507 46.2
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 1.5e-114 417.5 509 47.7
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 6.1e-108 395.6 434 50.2
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 5.7e-106 389.0 452 49.6
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 1.9e-101 374.0 340 59.1
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 3.6e-100 369.8 376 53.5
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 4.0e-99 366.3 392 53.6
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 1.7e-97 360.9 520 41.0
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 3.0e-86 323.6 501 41.9
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 1.3e-78 298.1 329 49.8
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 2.1e-63 247.7 347 45.2
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.1e-63 247.7 151 76.2
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 1.4e-59 235.0 404 35.1
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 8.4e-57 225.7 400 34.5
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 1.4e-51 208.4 697 27.1
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 6.3e-36 156.4 367 31.6
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.1e-32 145.6 95 72.6
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 1.4e-32 145.2 144 52.8
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 6.5e-25 119.8 66 80.3
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 4.2e-24 117.1 125 52.0
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 2.6e-10 71.2 60 56.7
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.2e-09 68.2 109 38.5


User provided reference genes

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