Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 2.0e-63 245.7 137 100.0
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 8.4e-62 240.4 137 96.4
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 4.5e-47 191.4 138 77.5
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 3.8e-46 188.3 137 73.7
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 5.0e-46 188.0 137 73.7
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 5.0e-46 188.0 137 73.7
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 5.0e-46 188.0 137 73.7
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 1.1e-45 186.8 137 74.5
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 2.5e-45 185.7 138 73.2
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.5e-45 185.7 137 73.0
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 7.2e-45 184.1 137 71.5
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 1.2e-44 183.3 137 71.5
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 3.6e-44 181.8 137 72.3
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 3.6e-44 181.8 137 72.3
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 3.6e-44 181.8 137 72.3
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 3.6e-44 181.8 137 71.5
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 4.6e-44 181.4 137 71.5
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 6.1e-44 181.0 137 71.5
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 6.1e-44 181.0 137 70.1
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 7.9e-44 180.6 137 70.8
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 7.9e-44 180.6 137 72.3
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.0e-43 180.3 137 70.8
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 1.0e-43 180.3 137 73.7
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 1.0e-43 180.3 137 73.0
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 1.4e-43 179.9 137 70.8
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 1.8e-43 179.5 137 73.0
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.3e-43 179.1 137 70.8
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 2.3e-43 179.1 137 69.3
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 6.7e-43 177.6 137 73.7
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 1.5e-42 176.4 129 76.0
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 1.5e-42 176.4 137 70.8
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 2.5e-42 175.6 138 71.0
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 2.5e-42 175.6 137 69.3
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 5.7e-42 174.5 137 70.8
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 5.7e-42 174.5 137 70.8
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 5.7e-42 174.5 140 71.4
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 7.4e-42 174.1 137 69.3
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.3e-41 173.3 139 74.1
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 1.3e-41 173.3 138 69.6
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 1.3e-41 173.3 136 70.6
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 2.8e-41 172.2 137 72.3
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 2.8e-41 172.2 138 74.6
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 3.7e-41 171.8 137 67.9
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 4.8e-41 171.4 136 69.1
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 4.8e-41 171.4 138 69.6
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 6.3e-41 171.0 138 69.6
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 6.3e-41 171.0 138 69.6
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 1.4e-40 169.9 138 73.2
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 1.4e-40 169.9 138 69.6
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 2.4e-40 169.1 137 68.6
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 3.1e-40 168.7 138 68.8
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 4.1e-40 168.3 141 68.1
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 5.3e-40 167.9 136 66.9
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 5.3e-40 167.9 137 70.1
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 6.9e-40 167.5 137 68.6
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 2.0e-39 166.0 138 68.1
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 4.5e-39 164.9 147 66.7
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 4.5e-39 164.9 137 67.2
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 7.7e-39 164.1 138 64.5
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 7.7e-39 164.1 137 65.7
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 7.7e-39 164.1 138 67.4
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 1.0e-38 163.7 138 69.6
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 1.3e-38 163.3 138 65.9
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 5.0e-38 161.4 139 65.5
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 5.0e-38 161.4 138 65.2
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 8.5e-38 160.6 131 67.9
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 8.5e-38 160.6 139 68.3
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.1e-37 160.2 131 67.9
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 1.1e-37 160.2 131 67.9
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 1.4e-37 159.8 131 67.9
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 1.4e-37 159.8 131 67.9
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 1.4e-37 159.8 131 67.9
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 1.9e-37 159.5 138 67.4
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 7.2e-37 157.5 131 67.2
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 9.4e-37 157.1 131 66.4
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 9.4e-37 157.1 131 66.4
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 1.2e-36 156.8 129 71.3
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 1.6e-36 156.4 131 64.9
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.6e-36 156.4 137 65.7
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 2.7e-36 155.6 138 63.8
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 3.6e-36 155.2 137 65.0
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 4.7e-36 154.8 137 67.2
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 6.1e-36 154.5 116 74.1
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 7.9e-36 154.1 130 66.2
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 7.9e-36 154.1 137 64.2
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 1.0e-35 153.7 136 60.3
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 3.9e-35 151.8 137 60.6
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 8.8e-35 150.6 139 66.9
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 1.5e-34 149.8 130 65.4
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 1.5e-34 149.8 137 63.5
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 9.7e-34 147.1 140 65.7
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 1.3e-33 146.7 138 62.3
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 3.7e-33 145.2 137 60.6
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 4.8e-33 144.8 137 61.3
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 4.8e-33 144.8 137 62.8
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 9.1e-32 140.6 143 54.5
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 1.5e-31 139.8 115 72.2
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 4.5e-31 138.3 131 65.6
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 8.5e-30 134.0 102 70.6
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 1.4e-29 133.3 103 66.0
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 3.2e-29 132.1 103 70.9
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 1.6e-28 129.8 106 73.6
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 6.7e-27 124.4 134 54.5
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 1.5e-26 123.2 131 59.5
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 5.7e-26 121.3 112 62.5
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 9.7e-26 120.6 106 63.2
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 1.1e-24 117.1 109 62.4
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 1.0e-22 110.5 105 63.8
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 6.1e-20 101.3 143 46.9
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 1.8e-19 99.8 126 57.1
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 1.3e-17 93.6 65 76.9
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 2.4e-16 89.4 65 75.4
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 7.7e-15 84.3 98 58.2
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 2.2e-14 82.8 137 45.3
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 3.8e-14 82.0 58 75.9
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 8.5e-14 80.9 68 57.4
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 1.1e-13 80.5 58 74.1
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 4.2e-13 78.6 58 72.4
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-12 77.0 59 74.6
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 1.2e-12 77.0 58 72.4
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 1.2e-12 77.0 58 70.7
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 3.6e-12 75.5 98 52.0
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 3.0e-11 72.4 58 70.7
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 2.0e-10 69.7 122 42.6
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 2.6e-10 69.3 108 51.9
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 4.4e-10 68.6 97 53.6
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 1.1e-08 63.9 45 77.8
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 1.1e-08 63.9 67 64.2
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 4.1e-08 62.0 45 75.6
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 1.6e-07 60.1 45 73.3
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 2.0e-07 59.7 130 33.8
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 2.7e-07 59.3 47 72.3
BcaC02g08205 Brassica carinata HOM05D005631 ORTHO05D006765 4.5e-07 58.5 43 69.8
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 1.0e-06 57.4 130 37.7
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 1.0e-06 57.4 79 49.4
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 1.7e-06 56.6 127 35.4
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 5.0e-06 55.1 67 53.7
Sabra10G0082900 Salix brachista HOM05D005631 ORTHO05D006765 6.6e-06 54.7 56 57.1


User provided reference genes

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