Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62009056 Chenopodium quinoa HOM05D000007 ORTHO05D000017 6.3e-57 223.8 106 100.0
AUR62009054 Chenopodium quinoa HOM05D000007 ORTHO05D000017 1.4e-35 152.9 97 74.2
EL10Ac2g03744 Beta vulgaris HOM05D000007 ORTHO05D000017 1.4e-32 142.9 97 69.1
Cc00_g07130 Coffea canephora HOM05D000007 ORTHO05D000017 2.2e-25 119.0 101 54.5
Ah.14g085690 Amaranthus hybridus HOM05D000007 ORTHO05D000017 7.8e-23 110.5 91 54.9
Solyc12g099550.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.0e-22 110.2 100 48.0
Lsat_1_v5_gn_4_143560 Lactuca sativa HOM05D000007 ORTHO05D000017 1.7e-22 109.4 101 46.5
PGSC0003DMG400004709 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.0e-22 107.8 101 46.5
Nitab4.5_0000059g0520 Nicotiana tabacum HOM05D000007 ORTHO05D000017 8.6e-22 107.1 104 51.0
SGA_v2.0_scaffold67G22669 Striga asiatica HOM05D000007 ORTHO05D000017 8.6e-22 107.1 105 50.5
Sopen12g034230 Solanum pennellii HOM05D000007 ORTHO05D000017 1.5e-21 106.3 100 46.0
CAN.G484.34 Capsicum annuum HOM05D000007 ORTHO05D000017 7.3e-21 104.0 101 45.5
ECA232G4348 Erigeron canadensis HOM05D000007 ORTHO05D000017 3.6e-20 101.7 101 42.6
Peaxi162Scf00646g00004 Petunia axillaris HOM05D000007 ORTHO05D000017 4.7e-20 101.3 97 46.4
Migut.F01560 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.1e-19 100.1 85 54.1
HanXRQChr09g0257741 Helianthus annuus HOM05D000007 ORTHO05D000017 1.1e-19 100.1 86 47.7
Nitab4.5_0005464g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-19 99.8 104 49.0
Migut.F01555 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.8e-19 99.4 85 52.9
Migut.F01563 Erythranthe guttata HOM05D000007 ORTHO05D000017 5.2e-19 97.8 85 54.1
Peaxi162Scf00158g10012 Petunia axillaris HOM05D000007 ORTHO05D000017 5.2e-19 97.8 87 49.4
Migut.D01866 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.6e-18 95.5 88 47.7
Peaxi162Scf00391g00076 Petunia axillaris HOM05D000007 ORTHO05D000017 1.9e-16 89.4 85 48.2
Peaxi162Scf00048g00184 Petunia axillaris HOM05D000007 ORTHO05D000017 2.7e-15 85.5 86 46.5
Nitab4.5_0000059g0530 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.0e-15 84.3 86 47.7
AUR62005813 Chenopodium quinoa HOM05D001884 ORTHO05D000017 1.7e-14 82.8 83 51.8
Nitab4.5_0000059g0510 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.3e-14 82.4 104 40.4
Nitab4.5_0005464g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.3e-14 82.4 104 39.4
Peaxi162Scf00698g00009 Petunia axillaris HOM05D000007 ORTHO05D000017 2.3e-14 82.4 86 45.3
Nitab4.5_0005464g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.9e-14 81.6 103 41.7
Peaxi162Scf00698g00119 Petunia axillaris HOM05D000007 ORTHO05D000017 4.3e-13 78.2 86 46.5
Peaxi162Scf00698g00012 Petunia axillaris HOM05D000007 ORTHO05D000017 5.6e-13 77.8 84 45.2
PGSC0003DMG400006277 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.6e-13 77.8 86 44.2
AUR62032803 Chenopodium quinoa HOM05D000007 ORTHO05D000017 9.5e-13 77.0 86 45.3
HanXRQChr09g0258071 Helianthus annuus HOM05D000007 ORTHO05D000017 1.2e-12 76.6 95 36.8
AUR62032804 Chenopodium quinoa HOM05D001884 ORTHO05D001890 1.6e-12 76.3 83 48.2
Migut.N00067 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.8e-12 75.5 96 40.6
Peaxi162Scf00048g01819 Petunia axillaris HOM05D000007 ORTHO05D000017 3.6e-12 75.1 86 43.0
vmacro04327 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 8.1e-12 73.9 82 41.5
CSS0004500 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 1.8e-11 72.8 96 39.6
CSS0046565 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 1.8e-11 72.8 96 39.6
vmacro17342 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 3.1e-11 72.0 82 41.5
CSS0042068 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 4.0e-11 71.6 96 38.5
Lsat_1_v5_gn_3_24620 Lactuca sativa HOM05D000007 ORTHO05D000017 4.0e-11 71.6 86 43.0
Peaxi162Scf00698g00004 Petunia axillaris HOM05D000007 ORTHO05D000017 4.0e-11 71.6 86 44.2
Nitab4.5_0002794g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.8e-11 70.9 87 41.4
CSS0002013 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 2.0e-10 69.3 82 35.4
ECA246G4363 Erigeron canadensis HOM05D000007 ORTHO05D000017 2.0e-10 69.3 99 41.4
Nitab4.5_0001889g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.8e-10 67.8 80 45.0
HanXRQChr17g0538721 Helianthus annuus HOM05D000007 ORTHO05D000017 7.6e-10 67.4 107 34.6
CSS0023195 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 1.7e-09 66.2 90 36.7
Nitab4.5_0000059g0620 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.7e-09 66.2 87 39.1
DCAR_030528 Daucus carota HOM05D002200 ORTHO05D002294 2.9e-09 65.5 102 35.3
Peaxi162Scf00048g00194 Petunia axillaris HOM05D000007 ORTHO05D000017 3.8e-09 65.1 103 38.8
Peaxi162Scf00052g00052 Petunia axillaris HOM05D000007 ORTHO05D000017 1.1e-08 63.5 103 37.9
Cc04_g11930 Coffea canephora HOM05D000007 ORTHO05D000017 1.4e-08 63.2 104 38.5
PGSC0003DMG400006293 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.4e-08 63.2 99 36.4
CSS0028402 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 1.9e-08 62.8 98 35.7
Nitab4.5_0000700g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.9e-08 62.8 82 40.2
Peaxi162Scf00052g00713 Petunia axillaris HOM05D000007 ORTHO05D000017 3.2e-08 62.0 76 43.4
Psat3g208120 Pisum sativum HOM05D000007 ORTHO05D000039 3.2e-08 62.0 105 31.4
Nitab4.5_0000191g0140 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.4e-08 61.2 82 43.9
Carub.0006s3183 Capsella rubella HOM05D000007 ORTHO05D000017 7.1e-08 60.8 84 36.9
Nitab4.5_0003546g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.1e-08 60.8 84 38.1
PGSC0003DMG400022858 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.1e-08 60.8 83 38.6
Nitab4.5_0000191g0130 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.2e-07 60.1 77 44.2
CAN.G185.24 Capsicum annuum HOM05D000007 ORTHO05D000017 1.6e-07 59.7 83 38.6
Peaxi162Scf00485g00132 Petunia axillaris HOM05D000007 ORTHO05D000017 1.6e-07 59.7 82 40.2
ECA240G2959 Erigeron canadensis HOM05D000007 ORTHO05D000017 2.1e-07 59.3 81 38.3
AT4G12560 Arabidopsis thaliana HOM05D000007 ORTHO05D000017 2.7e-07 58.9 83 36.1
ECA246G2645 Erigeron canadensis HOM05D000007 ORTHO05D000017 3.5e-07 58.5 93 34.4
PSO339G0424 Papaver somniferum HOM05D000007 ORTHO05D000017 3.5e-07 58.5 95 35.8
PSO339G0468 Papaver somniferum HOM05D000007 ORTHO05D000017 3.5e-07 58.5 95 35.8
PSO339G4459 Papaver somniferum HOM05D000007 ORTHO05D000017 3.5e-07 58.5 95 35.8
Rhsim05G0173800 Rhododendron simsii HOM05D000007 ORTHO05D000017 3.5e-07 58.5 97 35.1
PGSC0003DMG400006292 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.5e-07 58.5 82 39.0
Psat7g129440 Pisum sativum HOM05D000007 ORTHO05D000039 6.0e-07 57.8 105 30.5
Psat7g129480 Pisum sativum HOM05D000007 ORTHO05D000039 6.0e-07 57.8 105 30.5
PSO339G6585 Papaver somniferum HOM05D000007 ORTHO05D000017 7.8e-07 57.4 95 35.8
Cpa.g.sc75.108 Carica papaya HOM05D000007 ORTHO05D000017 1.0e-06 57.0 86 36.0
Nitab4.5_0000306g0340 Nicotiana tabacum HOM05D000389 ORTHO05D000287 1.0e-06 57.0 69 43.5
Peaxi162Scf00048g00192 Petunia axillaris HOM05D000007 ORTHO05D000017 1.0e-06 57.0 88 34.1
AL6G47500 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 1.3e-06 56.6 83 33.7
Thhalv10028697m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 1.3e-06 56.6 84 33.3
HanXRQChr09g0257111 Helianthus annuus HOM05D000007 ORTHO05D000017 1.3e-06 56.6 88 34.1
Lsat_1_v5_gn_4_143700 Lactuca sativa HOM05D000007 ORTHO05D000017 1.3e-06 56.6 82 35.4
Peaxi162Scf00095g00526 Petunia axillaris HOM05D000007 ORTHO05D000017 1.3e-06 56.6 102 34.3
PGR142G3580 Punica granatum HOM05D000007 ORTHO05D000017 1.7e-06 56.2 101 30.7
Sp6g04950 Schrenkiella parvula HOM05D000007 ORTHO05D000017 1.7e-06 56.2 83 33.7
Thecc.06G234400 Theobroma cacao HOM05D000007 ORTHO05D000017 2.3e-06 55.8 84 35.7
Ca_06153_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 3.0e-06 55.5 106 34.0
DCAR_024624 Daucus carota HOM05D000007 ORTHO05D000017 3.0e-06 55.5 82 36.6
COL.COLO4_26715 Corchorus olitorius HOM05D000007 ORTHO05D000017 3.9e-06 55.1 97 38.1
DCAR_020301 Daucus carota HOM05D000007 ORTHO05D000017 3.9e-06 55.1 88 34.1
Migut.A00778 Erythranthe guttata HOM05D000007 ORTHO05D000017 3.9e-06 55.1 81 37.0
BcaB05g23737 Brassica carinata HOM05D000007 ORTHO05D000017 5.1e-06 54.7 83 34.9
BcaC03g16267 Brassica carinata HOM05D000007 ORTHO05D000017 5.1e-06 54.7 83 34.9
C02p40630 Brassica napus HOM05D000007 ORTHO05D000017 5.1e-06 54.7 83 34.9
BolC2t10085H Brassica oleracea HOM05D000007 ORTHO05D000017 5.1e-06 54.7 83 34.9
Gohir.A09G200800 Gossypium hirsutum HOM05D000007 ORTHO05D000017 5.1e-06 54.7 106 33.0
PSO384G0356 Papaver somniferum HOM05D000007 ORTHO05D000017 5.1e-06 54.7 82 36.6
PSO384G1521 Papaver somniferum HOM05D000007 ORTHO05D000017 5.1e-06 54.7 82 36.6
PSO384G1660 Papaver somniferum HOM05D000007 ORTHO05D000017 5.1e-06 54.7 82 36.6
PSO384G2169 Papaver somniferum HOM05D000007 ORTHO05D000017 5.1e-06 54.7 82 36.6
PSO384G3415 Papaver somniferum HOM05D000007 ORTHO05D000017 5.1e-06 54.7 82 36.6
Peaxi162Scf00541g00017 Petunia axillaris HOM05D000007 ORTHO05D000017 5.1e-06 54.7 84 33.3
CARHR253610 Cardamine hirsuta HOM05D000007 ORTHO05D000017 6.6e-06 54.3 83 32.5
Medtr3g006670 Medicago truncatula HOM05D000007 ORTHO05D000017 6.6e-06 54.3 106 30.2
PSO675G7956 Papaver somniferum HOM05D000007 ORTHO05D000017 6.6e-06 54.3 83 38.6
Peaxi162Scf00048g00183 Petunia axillaris HOM05D000007 ORTHO05D000017 6.6e-06 54.3 54 50.0
SGA_v2.0_scaffold135G34779 Striga asiatica HOM05D000007 ORTHO05D000039 6.6e-06 54.3 85 36.5
CANSAT56G3489 Cannabis sativa HOM05D000007 ORTHO05D000017 8.6e-06 53.9 90 32.2
Gorai.006G218400 Gossypium raimondii HOM05D000007 ORTHO05D000017 8.6e-06 53.9 106 33.0
Peaxi162Scf00009g02613 Petunia axillaris HOM05D000007 ORTHO05D000017 8.6e-06 53.9 106 38.7
Sc05g0008330 Simmondsia chinensis HOM05D000007 ORTHO05D000017 8.6e-06 53.9 101 29.7


User provided reference genes

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