Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 7.0e-281 969.9 477 100.0
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.5e-225 784.3 477 84.5
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 2.6e-219 765.4 477 78.0
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.8e-207 726.1 482 75.9
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 5.1e-191 671.4 481 71.3
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 9.8e-158 560.8 420 66.7
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 5.4e-156 555.1 482 60.2
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 9.2e-156 554.3 422 63.0
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 3.5e-155 552.4 427 60.2
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 1.0e-154 550.8 495 54.7
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.3e-154 550.4 420 62.4
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 3.0e-154 549.3 445 60.2
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 8.6e-154 547.7 466 59.4
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 2.5e-153 546.2 459 58.8
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 4.3e-153 545.4 479 57.4
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.2e-152 543.9 428 60.3
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 4.7e-152 542.0 438 60.3
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 6.2e-152 541.6 498 56.4
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 8.0e-152 541.2 421 61.5
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.4e-151 540.4 453 59.8
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 5.2e-151 538.5 417 59.7
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 6.8e-151 538.1 413 61.5
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 8.9e-151 537.7 452 59.1
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 1.2e-150 537.3 484 56.4
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 2.0e-150 536.6 491 55.2
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 2.6e-150 536.2 422 60.7
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 3.4e-150 535.8 486 54.5
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 4.4e-150 535.4 429 58.7
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 5.8e-150 535.0 456 57.9
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 5.8e-150 535.0 423 59.3
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 5.8e-150 535.0 455 58.2
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 7.5e-150 534.6 442 58.6
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.3e-149 533.9 422 59.2
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 3.7e-149 532.3 441 59.4
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 3.7e-149 532.3 469 55.9
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 3.7e-149 532.3 422 60.7
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 3.7e-149 532.3 461 57.9
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 4.9e-149 531.9 427 59.7
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 8.3e-149 531.2 423 58.9
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 8.3e-149 531.2 473 56.7
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 2.4e-148 529.6 422 60.0
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 4.1e-148 528.9 442 57.7
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.2e-147 527.3 399 63.4
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 2.0e-147 526.6 421 59.9
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 2.0e-147 526.6 422 59.2
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 4.6e-147 525.4 470 56.2
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 4.6e-147 525.4 422 58.3
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 6.0e-147 525.0 416 60.3
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 1.0e-146 524.2 422 59.5
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.0e-146 524.2 423 58.4
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 1.3e-146 523.9 422 58.3
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 1.7e-146 523.5 472 55.1
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.7e-146 523.5 422 60.0
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 5.0e-146 521.9 370 66.5
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 1.1e-145 520.8 476 54.8
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 1.9e-145 520.0 417 58.3
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 4.7e-144 515.4 422 58.1
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 6.2e-144 515.0 428 58.4
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 6.2e-144 515.0 475 54.5
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 6.2e-144 515.0 414 59.2
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 8.1e-144 514.6 470 54.3
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 1.1e-143 514.2 415 58.6
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 1.1e-143 514.2 419 59.9
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 1.1e-143 514.2 472 55.3
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 2.3e-143 513.1 417 60.2
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 3.1e-143 512.7 416 60.1
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 4.0e-143 512.3 552 50.2
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 5.2e-143 511.9 466 56.2
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 6.8e-143 511.5 469 52.9
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 8.9e-143 511.1 476 54.0
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 5.8e-142 508.4 442 55.0
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 5.8e-142 508.4 466 54.1
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 6.4e-141 505.0 420 56.4
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 1.9e-140 503.4 415 58.3
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 9.2e-140 501.1 462 54.1
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 2.1e-139 500.0 416 56.2
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 4.6e-139 498.8 420 59.0
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.7e-138 496.9 406 57.6
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 2.3e-138 496.5 391 60.4
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 3.0e-138 496.1 419 58.5
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 5.6e-137 491.9 416 54.3
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 1.3e-133 480.7 371 59.8
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 6.4e-133 478.4 461 53.4
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 4.6e-131 472.2 392 58.2
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 1.3e-130 470.7 493 49.5
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 1.3e-130 470.7 451 52.8
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 1.5e-129 467.2 498 49.6
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 3.3e-129 466.1 374 57.0
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 1.4e-127 460.7 421 54.2
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 3.1e-127 459.5 473 50.5
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 4.0e-127 459.1 367 58.6
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 9.6e-121 438.0 413 53.0
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 9.6e-121 438.0 425 53.9
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 5.8e-118 428.7 365 55.3
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.6e-113 412.1 433 50.6
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 9.6e-113 411.4 432 50.0
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 5.8e-110 402.1 396 53.5
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 1.7e-101 374.0 419 44.2
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 3.9e-98 362.8 430 42.6
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.0e-93 348.2 415 41.7
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.6e-91 339.7 302 54.3
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.1e-89 334.7 361 49.9
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 7.4e-89 332.0 284 58.1
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.6e-83 313.2 222 64.9
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.4e-82 311.2 402 41.3
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 1.5e-68 264.6 261 50.6
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.8e-66 257.7 189 66.1
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 2.6e-65 253.8 243 53.1
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 2.3e-53 214.2 441 32.2
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.2e-49 201.8 221 47.5
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 2.9e-45 187.2 456 30.3
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.6e-41 174.1 126 66.7
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.8e-34 151.4 99 69.7
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 4.1e-31 140.2 95 66.3
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 9.2e-31 139.0 117 56.4
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 1.3e-29 135.2 103 59.2
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.6e-29 132.9 93 62.4
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 7.3e-28 129.4 430 25.6
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.5e-22 110.5 87 60.9
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 7.8e-22 109.4 64 75.0
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 3.6e-19 100.5 90 51.1
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 3.9e-13 80.5 70 61.4
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 5.1e-13 80.1 51 66.7
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 7.3e-12 76.3 80 45.0
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 1.4e-10 72.0 77 55.8
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 3.4e-09 67.4 42 85.7


User provided reference genes

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