Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 2.1e-166 589.0 302 100.0
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.7e-163 579.3 302 98.0
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.0e-152 543.5 302 90.1
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 5.5e-138 494.6 301 81.4
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 1.2e-137 493.4 300 82.7
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 2.1e-137 492.7 301 81.4
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 4.6e-137 491.5 301 80.7
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 4.6e-137 491.5 301 80.7
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 7.9e-137 490.7 301 82.7
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 3.9e-136 488.4 304 81.6
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 2.8e-134 482.3 301 78.7
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 3.7e-134 481.9 301 80.1
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 3.7e-134 481.9 301 78.7
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 4.8e-134 481.5 301 80.4
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 4.8e-134 481.5 301 79.1
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 4.8e-134 481.5 300 79.3
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 1.1e-133 480.3 301 80.4
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 2.4e-133 479.2 301 79.1
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 2.4e-133 479.2 301 79.4
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 4.1e-133 478.4 301 78.4
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 5.3e-133 478.0 301 78.4
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 5.3e-133 478.0 301 78.4
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 6.9e-133 477.6 301 79.7
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 1.2e-132 476.9 300 79.3
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.2e-132 476.9 301 79.7
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 1.5e-132 476.5 299 79.6
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 2.0e-132 476.1 299 78.9
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 2.6e-132 475.7 301 79.4
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 5.8e-132 474.6 301 79.7
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 5.8e-132 474.6 301 79.7
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.6e-132 474.2 301 79.7
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.6e-132 474.2 301 79.7
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 7.6e-132 474.2 301 79.7
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 7.6e-132 474.2 300 78.0
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 1.3e-131 473.4 301 78.4
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 1.7e-131 473.0 301 77.7
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.7e-131 473.0 301 78.1
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 2.2e-131 472.6 287 83.3
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 2.2e-131 472.6 299 77.9
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 3.8e-131 471.9 300 77.7
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 3.8e-131 471.9 301 77.7
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 5.0e-131 471.5 301 78.1
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 6.5e-131 471.1 299 78.9
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 8.4e-131 470.7 300 77.7
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.1e-130 470.3 299 78.9
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.1e-130 470.3 299 78.9
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 1.1e-130 470.3 301 77.7
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 1.9e-130 469.5 301 76.7
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 4.2e-130 468.4 300 78.0
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 5.5e-130 468.0 301 76.7
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 5.5e-130 468.0 299 78.3
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 2.1e-129 466.1 302 76.8
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 6.1e-129 464.5 299 77.6
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 6.7e-128 461.1 301 76.1
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.9e-127 459.5 301 76.4
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.5e-127 459.1 292 76.0
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 5.7e-127 458.0 301 74.4
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 3.7e-126 455.3 301 75.7
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.8e-125 453.0 300 73.0
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 7.7e-124 447.6 303 72.9
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 3.2e-122 442.2 300 72.7
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 4.2e-122 441.8 303 72.6
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 1.6e-121 439.9 293 75.4
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 2.1e-121 439.5 301 70.8
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 2.7e-121 439.1 304 70.4
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 7.9e-121 437.6 303 74.6
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 2.3e-120 436.0 300 71.7
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 2.3e-120 436.0 303 71.9
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 3.9e-120 435.3 304 72.7
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 1.1e-119 433.7 304 72.7
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 2.5e-119 432.6 301 71.8
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 1.3e-118 430.3 300 71.7
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.7e-118 429.9 303 72.3
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 2.2e-118 429.5 302 71.2
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 4.8e-118 428.3 304 69.7
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 6.3e-118 427.9 300 71.3
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 8.2e-118 427.6 300 70.7
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 1.1e-117 427.2 300 71.0
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 1.1e-117 427.2 300 71.0
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 1.8e-117 426.4 300 70.3
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 3.1e-117 425.6 300 70.7
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 4.1e-117 425.2 300 70.3
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 1.5e-116 423.3 300 70.3
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 2.0e-116 422.9 275 77.8
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 7.7e-116 421.0 300 70.7
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 1.0e-115 420.6 300 69.7
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 1.7e-115 419.9 300 69.0
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 8.5e-115 417.5 300 68.7
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.1e-114 417.2 300 69.3
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 3.2e-114 415.6 311 68.2
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 5.5e-114 414.8 300 68.3
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 2.3e-112 409.5 300 68.0
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 2.3e-112 409.5 300 68.0
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 2.3e-112 409.5 300 68.0
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.5e-111 406.8 300 68.3
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 2.8e-110 402.5 249 79.1
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 2.0e-108 396.4 249 77.5
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 5.9e-100 368.2 302 62.9
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.0e-99 367.5 259 71.4
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.2e-99 366.3 230 78.3
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 4.2e-98 362.1 227 78.4
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 3.6e-97 359.0 213 81.7
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 3.6e-97 359.0 299 61.5
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.4e-95 352.1 222 75.7
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 7.5e-95 351.3 235 74.0
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 7.5e-95 351.3 218 77.5
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 2.8e-94 349.4 305 58.4
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 2.2e-91 339.7 255 65.9
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 1.9e-90 336.7 218 78.0
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 1.0e-88 330.9 249 65.5
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 5.4e-85 318.5 277 57.0
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.0e-80 304.3 301 57.5
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 1.7e-78 297.0 339 48.4
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 1.6e-73 280.4 173 76.9
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 4.0e-56 222.6 316 40.8
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.0e-47 193.7 163 60.7
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 4.4e-47 192.6 141 69.5
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.6e-41 174.1 343 33.8
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 6.2e-41 172.2 301 39.2
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 4.4e-39 166.0 177 48.6
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.3e-38 164.5 110 74.5
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.7e-30 137.5 88 72.7
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 1.2e-28 131.3 89 68.5
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 2.5e-26 123.6 91 67.0
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 1.4e-24 117.9 86 72.1
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 2.2e-22 110.5 350 29.4
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 8.4e-22 108.6 72 66.7
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.5e-18 97.8 138 44.2
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.4e-16 91.3 67 58.2
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 2.4e-16 90.5 64 71.9
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 9.3e-13 78.6 44 79.5


User provided reference genes

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