Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62006107 Chenopodium quinoa HOM05D007280 ORTHO05D009108 2.7e-224 782.3 615 100.0
AUR62019383 Chenopodium quinoa HOM05D007280 ORTHO05D009108 3.6e-213 745.3 616 96.6
Ah.13g070140 Amaranthus hybridus HOM05D007280 ORTHO05D009108 1.5e-113 414.5 365 58.1
Ah.07g205740 Amaranthus hybridus HOM05D007280 ORTHO05D009108 1.6e-96 357.8 346 56.4
Potri.010G098700 Populus trichocarpa HOM05D007280 ORTHO05D009108 9.9e-78 295.4 581 52.7
Cpa.g.sc2.97 Carica papaya HOM05D007280 ORTHO05D009108 1.7e-77 294.7 568 54.6
Sabra08G0108200 Salix brachista HOM05D007280 ORTHO05D009108 8.7e-74 282.3 560 53.9
Cfa015100 Carpinus fangiana HOM05D007280 ORTHO05D009108 1.5e-73 281.6 573 54.8
Hma1.2p1_0319F.1_g123900 Hydrangea macrophylla HOM05D007280 ORTHO05D009108 3.9e-66 256.9 346 41.9
Haze_01575 Corylus avellana HOM05D007280 ORTHO05D009108 8.7e-66 255.8 569 52.0
Nn4g24834 Nelumbo nucifera HOM05D007280 ORTHO05D009108 3.3e-65 253.8 376 41.5
Thecc.09G239200 Theobroma cacao HOM05D007280 ORTHO05D009108 1.6e-64 251.5 342 41.5
Peaxi162Scf00329g00097 Petunia axillaris HOM05D007280 ORTHO05D009108 4.8e-64 250.0 290 44.1
Lj2g0005518 Lotus japonicus HOM05D007280 ORTHO05D009108 1.4e-63 248.4 336 40.2
Solyc04g008570.4 Solanum lycopersicum HOM05D007280 ORTHO05D009108 2.4e-63 247.7 350 39.4
PGSC0003DMG400031369 Solanum tuberosum HOM05D007280 ORTHO05D009108 2.4e-63 247.7 350 39.7
SalBow3G1417 Salvia bowleyana HOM05D007280 ORTHO05D009108 6.9e-63 246.1 582 56.7
CAN.G458.1 Capsicum annuum HOM05D007280 ORTHO05D009108 9.0e-63 245.7 363 39.9
TWI74G1184 Tripterygium wilfordii HOM05D007280 ORTHO05D009108 9.0e-63 245.7 319 40.1
Sopen04g003730 Solanum pennellii HOM05D007280 ORTHO05D009108 1.2e-62 245.4 347 39.5
Ca_12458_v3 Cicer arietinum L. HOM05D007280 ORTHO05D009108 2.6e-62 244.2 372 38.4
Lj3P855T51 Lonicera japonica HOM05D007280 ORTHO05D009108 4.5e-62 243.4 339 41.3
Cc11_g02870 Coffea canephora HOM05D007280 ORTHO05D009108 7.6e-62 242.7 336 44.0
Prupe.1G342100 Prunus persica HOM05D007280 ORTHO05D009108 9.9e-62 242.3 350 40.6
DCAR_023520 Daucus carota HOM05D007280 ORTHO05D009108 1.3e-61 241.9 356 39.0
Medtr1g033840 Medicago truncatula HOM05D007280 ORTHO05D009108 1.4e-60 238.4 369 37.9
FAN12G0470 Fragaria x ananassa HOM05D007280 ORTHO05D009108 1.9e-60 238.0 346 39.6
Glyma.20G010600 Glycine max HOM05D007280 ORTHO05D009108 1.9e-60 238.0 563 48.8
FAN07G2371 Fragaria x ananassa HOM05D007280 ORTHO05D009108 1.6e-59 235.0 329 40.1
HanXRQChr16g0526501 Helianthus annuus HOM05D007280 ORTHO05D009108 1.6e-59 235.0 370 38.6
CSS0013384 Camellia sinensis var. sinensis HOM05D007280 ORTHO05D009108 2.7e-59 234.2 357 39.5
FvH4_4g36140 Fragaria vesca HOM05D007280 ORTHO05D009108 2.7e-59 234.2 346 39.6
VMungo1215G2162 Vigna mungo HOM05D007280 ORTHO05D009108 3.5e-59 233.8 334 38.0
Lalb_Chr17g0338341 Lupinus albus HOM05D007280 ORTHO05D009108 1.8e-58 231.5 339 39.5
Psat6g095680 Pisum sativum HOM05D007280 ORTHO05D009108 3.0e-58 230.7 336 38.7
Phvul.003G013000 Phaseolus vulgaris HOM05D007280 ORTHO05D009108 3.9e-58 230.3 334 38.0
MD16G1008400 Malus domestica HOM05D007280 ORTHO05D009108 6.7e-58 229.6 291 42.6
ECA246G2688 Erigeron canadensis HOM05D007280 ORTHO05D009108 1.9e-57 228.0 290 48.6
Eucgr.B02618 Eucalyptus grandis HOM05D007280 ORTHO05D009108 2.5e-57 227.6 323 41.8
THA.LOC104819105 Tarenaya hassleriana HOM05D007280 ORTHO05D009108 3.3e-57 227.3 352 37.5
Rhsim04G0168900 Rhododendron simsii HOM05D007280 ORTHO05D009108 5.6e-57 226.5 379 37.5
MD13G1010900 Malus domestica HOM05D007280 ORTHO05D009108 1.6e-56 224.9 313 41.2
Sabra10G0071200 Salix brachista HOM05D007280 ORTHO05D009108 2.1e-56 224.6 581 48.7
Ciclev10004581m.g Citrus clementina HOM05D007280 ORTHO05D009108 4.8e-56 223.4 364 38.5
Lsat_1_v5_gn_3_27640 Lactuca sativa HOM05D007280 ORTHO05D009108 8.2e-56 222.6 325 46.2
MSTRG.17728 Avicennia marina HOM05D007280 ORTHO05D009108 1.4e-55 221.9 335 39.4
Aa31sc65G20 Aethionema arabicum HOM05D007280 ORTHO05D009108 2.4e-55 221.1 303 39.3
TPR.G35854 Trifolium pratense HOM05D007280 ORTHO05D009108 3.1e-55 220.7 378 35.2
Sabra08G0108600 Salix brachista HOM05D007280 ORTHO05D009108 3.8e-53 213.8 343 37.0
PGR044G2110 Punica granatum HOM05D007280 ORTHO05D009108 6.0e-51 206.5 342 38.3
Sp6g30250 Schrenkiella parvula HOM05D007280 ORTHO05D009108 1.0e-50 205.7 343 36.7
A02p02170 Brassica napus HOM05D007280 ORTHO05D009108 5.1e-50 203.4 285 37.5
BraA02t05191Z Brassica rapa HOM05D007280 ORTHO05D009108 1.1e-49 202.2 285 37.2
Thhalv10016019m.g Eutrema salsugineum HOM05D007280 ORTHO05D009108 4.3e-49 200.3 341 36.1
Manes.17G093400 Manihot esculenta HOM05D007280 ORTHO05D009108 1.3e-48 198.7 291 39.2
C02p06420 Brassica napus HOM05D007280 ORTHO05D009108 6.3e-48 196.4 286 36.7
BolC2t06588H Brassica oleracea HOM05D007280 ORTHO05D009108 6.3e-48 196.4 286 36.7
AT5G13770 Arabidopsis thaliana HOM05D007280 ORTHO05D009108 1.1e-47 195.7 341 34.6
AL6G24390 Arabidopsis lyrata HOM05D007280 ORTHO05D009108 1.4e-47 195.3 341 34.3
Carub.0006s1195 Capsella rubella HOM05D007280 ORTHO05D009108 1.4e-47 195.3 342 35.1
CDE08G0845 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 2.4e-47 194.5 339 35.4
Glyma.07G177100 Glycine max HOM05D007280 ORTHO05D009108 9.0e-47 192.6 287 37.6
QL03p041451 Quercus lobata HOM05D007280 ORTHO05D009108 1.3e-45 188.7 267 40.1
Os04g0583101 Oryza sativa ssp. japonica HOM05D007280 ORTHO05D009108 3.8e-45 187.2 519 45.5
ATR0705G126 Amborella trichopoda HOM05D007280 ORTHO05D009108 1.4e-44 185.3 325 36.0
Gohir.A09G112200 Gossypium hirsutum HOM05D007280 ORTHO05D009108 2.1e-43 181.4 290 36.9
Gohir.D09G108900 Gossypium hirsutum HOM05D007280 ORTHO05D009108 2.1e-43 181.4 347 36.0
Gohir.D06G095050 Gossypium hirsutum HOM05D007280 ORTHO05D009108 3.6e-43 180.6 346 35.8
Gorai.006G126500 Gossypium raimondii HOM05D007280 ORTHO05D009108 3.6e-43 180.6 347 36.0
Potri.008G142900 Populus trichocarpa HOM05D007280 ORTHO05D009108 3.6e-43 180.6 271 37.3
Zm00001eb072910 Zea mays HOM05D007280 ORTHO05D009108 4.6e-43 180.3 594 40.2
MELO3C027064.2 Cucumis melo HOM05D007280 ORTHO05D009108 1.0e-42 179.1 281 38.1
PSO782G1316 Papaver somniferum HOM05D007280 ORTHO05D009108 2.3e-42 177.9 273 38.1
TAR622G0173 Trochodendron aralioides HOM05D007280 ORTHO05D009108 3.0e-42 177.6 248 40.7
BcaNung04186 Brassica carinata HOM05D007280 ORTHO05D009108 3.9e-42 177.2 342 33.6
Sc14g0006690 Simmondsia chinensis HOM05D007280 ORTHO05D009108 8.8e-42 176.0 231 40.3
Duzib168G0083 Durio zibethinus HOM05D007280 ORTHO05D009108 7.4e-41 172.9 344 33.7
Sed0008466 Sechium edule HOM05D007280 ORTHO05D009108 9.7e-41 172.6 296 36.5
CsaV3_5G017390 Cucumis sativus L. HOM05D007280 ORTHO05D009108 1.1e-39 169.1 320 35.3
PSO063G1027 Papaver somniferum HOM05D007280 ORTHO05D009108 1.8e-39 168.3 242 38.4
ClCG01G006970 Citrullus lanatus HOM05D007280 ORTHO05D009108 4.1e-39 167.2 275 37.1
Migut.N02514 Erythranthe guttata HOM05D007280 ORTHO05D009108 6.9e-39 166.4 267 36.3
Lsat_1_v5_gn_4_26101 Lactuca sativa HOM05D007280 ORTHO05D009108 1.5e-38 165.2 243 36.6
Oeu006355.1 Olea europaea HOM05D007280 ORTHO05D009108 7.7e-38 162.9 234 38.5
Dinv17118 Davidia involucrata HOM05D007280 ORTHO05D009108 1.9e-36 158.3 227 40.1
CDE04G3512 Ceratophyllum demersum HOM05D007280 ORTHO05D009108 2.5e-36 157.9 341 32.6
Nitab4.5_0000129g0410 Nicotiana tabacum HOM05D007280 ORTHO05D009108 1.8e-34 151.8 343 59.2
MBI03_g37599_MAGBIO Magnolia biondii HOM05D007280 ORTHO05D009108 6.3e-32 143.3 335 30.4
GSVIVG01010259001 Vitis vinifera HOM05D007280 ORTHO05D009108 5.3e-31 140.2 310 29.4
Aqoxy3G04194 Aquilegia oxysepala HOM05D007280 ORTHO05D009108 1.5e-30 138.7 268 34.7
CARHR199670 Cardamine hirsuta HOM05D007280 ORTHO05D009108 6.5e-29 133.3 297 30.3
QL11p025101 Quercus lobata HOM05D007280 ORTHO05D009108 1.0e-26 125.9 107 57.9
CiPaw.05G161600 Carya illinoinensis HOM05D007280 ORTHO05D009108 2.3e-26 124.8 282 31.6
COL.COLO4_36459 Corchorus olitorius HOM05D007280 ORTHO05D009108 5.2e-26 123.6 298 31.9
Ciclev10006779m.g Citrus clementina HOM05D007280 ORTHO05D009108 2.8e-24 117.9 340 53.8
RcHm_v2.0_Chr4g0445881 Rosa chinensis HOM05D007280 ORTHO05D009108 8.2e-24 116.3 346 28.6
GSVIVG01032336001 Vitis vinifera HOM05D007280 ORTHO05D009108 1.4e-23 115.5 255 29.4
Nitab4.5_0003882g0050 Nicotiana tabacum HOM05D007280 ORTHO05D009108 2.6e-22 111.3 109 53.2
FAN22G2182 Fragaria x ananassa HOM05D007280 ORTHO05D009108 6.8e-18 96.7 70 65.7
MBI03_g37600_MAGBIO Magnolia biondii HOM05D007280 ORTHO05D009108 2.8e-16 91.3 61 68.9
ECA234G4111 Erigeron canadensis HOM05D007280 ORTHO05D009108 3.7e-16 90.9 83 54.2
QL11p025168 Quercus lobata HOM05D007280 ORTHO05D009108 2.4e-15 88.2 87 49.4
SEGI_25718 Sequoiadendron giganteum HOM05D007280 ORTHO05D009108 2.5e-12 78.2 149 30.9


User provided reference genes

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