Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62005243 Chenopodium quinoa HOM05D005421 ORTHO05D007601 7.4e-111 404.4 300 100.0
EL10Ac4g09870 Beta vulgaris HOM05D005421 ORTHO05D007601 6.5e-107 391.3 190 97.4
Ah.04g161240 Amaranthus hybridus HOM05D005421 ORTHO05D007601 8.7e-104 380.9 190 93.2
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 1.8e-101 373.2 190 91.6
Sc16g0008670 Simmondsia chinensis HOM05D005421 ORTHO05D007601 1.5e-100 370.2 190 90.0
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 1.0e-99 367.5 190 90.5
Thecc.06G040900 Theobroma cacao HOM05D005421 ORTHO05D007601 2.9e-99 365.9 190 90.0
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 3.8e-99 365.5 190 90.5
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 8.5e-99 364.4 190 87.9
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 1.9e-98 363.2 190 89.5
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 5.5e-98 361.7 190 87.9
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 7.2e-98 361.3 190 88.4
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 7.2e-98 361.3 190 88.4
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 7.2e-98 361.3 190 88.4
Medtr1g083720 Medicago truncatula HOM05D005421 ORTHO05D007601 7.2e-98 361.3 190 88.4
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 9.4e-98 360.9 190 87.9
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 9.4e-98 360.9 190 88.4
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 1.6e-97 360.1 190 87.9
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 2.1e-97 359.8 190 87.4
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 2.1e-97 359.8 190 88.4
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 2.1e-97 359.8 190 88.4
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 2.7e-97 359.4 190 86.3
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 2.7e-97 359.4 190 87.9
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 2.7e-97 359.4 190 87.9
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 2.7e-97 359.4 189 88.4
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 2.7e-97 359.4 190 87.4
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 3.6e-97 359.0 190 87.4
MD04G1196900 Malus domestica HOM05D005421 ORTHO05D007601 3.6e-97 359.0 190 88.9
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 4.6e-97 358.6 190 87.9
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 6.1e-97 358.2 190 88.4
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 6.1e-97 358.2 190 88.9
Potri.013G012000 Populus trichocarpa HOM05D005421 ORTHO05D007601 7.9e-97 357.8 190 87.9
Sabra13G0010600 Salix brachista HOM05D005421 ORTHO05D007601 7.9e-97 357.8 190 87.9
CAN.G1273.26 Capsicum annuum HOM05D005421 ORTHO05D007601 1.0e-96 357.5 190 89.5
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 1.0e-96 357.5 190 86.3
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 1.4e-96 357.1 190 87.4
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 1.4e-96 357.1 190 87.4
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 1.8e-96 356.7 189 86.8
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 1.8e-96 356.7 189 87.8
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 2.3e-96 356.3 189 86.8
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 2.3e-96 356.3 190 87.9
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 2.3e-96 356.3 190 88.4
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 2.3e-96 356.3 190 88.4
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 3.0e-96 355.9 190 86.8
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 3.9e-96 355.5 190 87.9
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 3.9e-96 355.5 189 87.3
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 3.9e-96 355.5 189 87.3
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 3.9e-96 355.5 190 85.8
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 3.9e-96 355.5 190 85.8
Lalb_Chr21g0310441 Lupinus albus HOM05D005421 ORTHO05D007601 3.9e-96 355.5 188 88.3
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 3.9e-96 355.5 190 88.4
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 5.1e-96 355.1 190 86.3
Prupe.1G236900 Prunus persica HOM05D005421 ORTHO05D007601 5.1e-96 355.1 190 87.9
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 6.7e-96 354.8 190 86.8
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 8.8e-96 354.4 190 85.3
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 8.8e-96 354.4 190 85.8
Nitab4.5_0001971g0070 Nicotiana tabacum HOM05D005421 ORTHO05D007601 1.1e-95 354.0 190 88.4
Nitab4.5_0002612g0040 Nicotiana tabacum HOM05D005421 ORTHO05D007601 1.1e-95 354.0 190 88.4
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 1.1e-95 354.0 189 86.8
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 1.5e-95 353.6 190 86.3
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 2.0e-95 353.2 189 87.3
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 2.5e-95 352.8 189 87.3
VMungo0720G1843 Vigna mungo HOM05D005421 ORTHO05D007601 2.5e-95 352.8 188 87.2
Zm00001eb095730 Zea mays HOM05D005421 ORTHO05D007601 2.5e-95 352.8 190 87.4
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 3.3e-95 352.4 190 85.8
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 3.3e-95 352.4 190 86.8
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 4.3e-95 352.1 190 85.3
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 4.3e-95 352.1 190 86.8
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 4.3e-95 352.1 190 84.7
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 5.7e-95 351.7 190 86.3
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 9.7e-95 350.9 190 85.3
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 1.3e-94 350.5 190 84.7
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 1.7e-94 350.1 189 85.7
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 1.7e-94 350.1 190 84.7
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 3.7e-94 349.0 190 84.7
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 3.7e-94 349.0 190 84.7
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 3.7e-94 349.0 190 86.3
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 3.7e-94 349.0 190 85.8
AUR62000721 Chenopodium quinoa HOM05D005421 ORTHO05D007601 4.8e-94 348.6 167 99.4
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 6.3e-94 348.2 190 84.2
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 8.2e-94 347.8 190 84.2
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 8.2e-94 347.8 190 84.2
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 8.2e-94 347.8 190 84.2
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 8.2e-94 347.8 190 84.2
ECA236G4663 Erigeron canadensis HOM05D005421 ORTHO05D007601 8.2e-94 347.8 190 84.7
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 1.1e-93 347.4 190 85.8
Os09g0103600 Oryza sativa ssp. japonica HOM05D005421 ORTHO05D007601 1.1e-93 347.4 190 85.3
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 1.8e-93 346.7 189 84.1
HPP92_020212 Vanilla planifolia HOM05D005421 ORTHO05D007601 2.4e-93 346.3 190 85.3
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 2.4e-93 346.3 190 85.3
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 6.9e-93 344.7 204 79.9
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 9.1e-93 344.4 239 71.1
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 4.5e-92 342.0 208 78.4
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 5.9e-92 341.7 190 83.2
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 1.7e-91 340.1 190 83.2
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 8.5e-91 337.8 190 82.1
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 1.4e-90 337.0 242 69.4
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 7.2e-90 334.7 190 80.5
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 7.2e-90 334.7 213 75.1
CBR_g27792 Chara braunii HOM05D005421 ORTHO05D007601 9.4e-90 334.3 190 82.1
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 2.1e-89 333.2 197 80.2
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 1.0e-88 330.9 190 82.1
Nitab4.5_0003248g0020 Nicotiana tabacum HOM05D005421 ORTHO05D007601 2.3e-88 329.7 190 82.6
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 6.7e-88 328.2 189 79.9
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 4.4e-87 325.5 211 73.9
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 9.7e-87 324.3 190 80.5
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 9.7e-87 324.3 218 72.5
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 1.1e-85 320.9 208 76.4
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea HOM05D005421 ORTHO05D007601 1.4e-85 320.5 266 62.0
SMO361G0640 Selaginella moellendorffii HOM05D005421 ORTHO05D007601 1.6e-84 317.0 190 76.8
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 1.0e-83 314.3 167 87.4
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea HOM05D005421 ORTHO05D007601 1.0e-80 304.3 200 74.0
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 2.6e-79 299.7 184 77.2
TWI38G1969 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 1.7e-78 297.0 190 72.1
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 7.7e-76 288.1 155 84.5
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 1.1e-74 284.3 190 75.8
Cre12.g503400 Chlamydomonas reinhardtii HOM05D005421 ORTHO05D007601 4.8e-70 268.9 190 61.1
Peaxi162Scf00404g00814 Petunia axillaris HOM05D005421 ORTHO05D007601 4.5e-68 262.3 186 70.4
MCO01G394 Micromonas commoda HOM05D005421 ORTHO05D007601 4.0e-56 222.6 185 54.6
Haze_27467 Corylus avellana HOM05D005421 ORTHO05D007601 3.4e-55 219.5 184 57.6
PRCOL_00004539 Prasinoderma coloniale HOM05D005421 ORTHO05D007601 5.0e-51 205.7 192 52.6
Lj9C202T10 Lonicera japonica HOM05D005421 ORTHO05D007601 3.4e-47 193.0 97 91.8
Potri.005G021600 Populus trichocarpa HOM05D005421 ORTHO05D007601 7.5e-47 191.8 139 67.6
SEGI_13779 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 9.5e-42 174.9 94 85.1
Prupe.6G317400 Prunus persica HOM05D005421 ORTHO05D007601 4.1e-37 159.5 95 77.9
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 7.1e-37 158.7 93 77.4
SEGI_07889 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 1.5e-26 124.4 90 65.6
ATR0469G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 6.9e-24 115.5 70 74.3
ATR1164G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 6.9e-24 115.5 70 74.3
TAR362G1077 Trochodendron aralioides HOM05D005421 ORTHO05D026565 1.7e-19 100.9 56 82.1
Lj3g0025046 Lotus japonicus HOM05D005421 ORTHO05D026565 1.5e-15 87.8 56 71.4
RcHm_v2.0_Chr7g0209371 Rosa chinensis HOM05D005421 ORTHO05D007601 6.4e-14 82.4 53 66.0
BcaB06g27834 Brassica carinata HOM05D005421 ORTHO05D031867 1.2e-12 78.2 69 58.0
Dinv05263 Davidia involucrata HOM05D002902 ORTHO05D008934 7.4e-10 68.9 42 76.2


User provided reference genes

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