Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62004261 Chenopodium quinoa HOM05D041974 ORTHO05D024977 1.9e-50 202.2 100 100.0
AUR62042748 Chenopodium quinoa HOM05D041974 ORTHO05D024977 4.4e-36 154.5 106 75.5
AUR62042749 Chenopodium quinoa HOM05D041974 ORTHO05D024977 1.6e-14 82.8 84 52.4
Hma1.2p1_0123F.1_g057950 Hydrangea macrophylla HOM05D000984 ORTHO05D001096 8.4e-11 70.5 88 38.6
Eucgr.L03437 Eucalyptus grandis HOM05D038387 ORTHO05D024977 2.1e-09 65.9 74 39.2
Manes.15G093650 Manihot esculenta HOM05D000984 ORTHO05D001096 6.0e-09 64.3 83 34.9
Rhsim11G0055200 Rhododendron simsii HOM05D000984 ORTHO05D024977 1.3e-08 63.2 85 37.6
RcHm_v2.0_Chr6g0244451 Rosa chinensis HOM05D000984 ORTHO05D001096 1.8e-08 62.8 81 38.3
Peaxi162Scf00253g00076 Petunia axillaris HOM05D000984 ORTHO05D001096 2.3e-08 62.4 74 39.2
GSVIVG01021058001 Vitis vinifera HOM05D000984 ORTHO05D001096 3.9e-08 61.6 79 34.2
CAN.G1251.3 Capsicum annuum HOM05D000984 ORTHO05D001096 5.1e-08 61.2 85 36.5
Nitab4.5_0008025g0030 Nicotiana tabacum HOM05D000984 ORTHO05D025942 6.7e-08 60.8 67 38.8
Lj1g0016512 Lotus japonicus HOM05D000984 ORTHO05D001096 1.1e-07 60.1 89 37.1
FvH4_2g01621 Fragaria vesca HOM05D000984 ORTHO05D001096 1.9e-07 59.3 81 34.6
FAN24G3473 Fragaria x ananassa HOM05D000984 ORTHO05D001096 1.9e-07 59.3 81 34.6
DCAR_026876 Daucus carota HOM05D000984 ORTHO05D022333 3.3e-07 58.5 76 39.5
Atru.chr4.1677 Acer truncatum HOM05D000984 ORTHO05D001096 4.3e-07 58.2 81 33.3
Actinidia40379 Actinidia chinensis HOM05D000984 ORTHO05D001096 7.4e-07 57.4 59 42.4
AUR62000375 Chenopodium quinoa HOM05D000984 ORTHO05D022333 7.4e-07 57.4 82 34.1
PGR044G0632 Punica granatum HOM05D000984 ORTHO05D001096 7.4e-07 57.4 84 29.8
AT5G55856 Arabidopsis thaliana HOM05D000984 ORTHO05D001096 1.6e-06 56.2 76 38.2
VMungo1383G0346 Vigna mungo HOM05D000984 ORTHO05D001096 1.6e-06 56.2 96 34.4
BcaC07g38903 Brassica carinata HOM05D000984 ORTHO05D010979 2.1e-06 55.8 73 39.7
BolC8t49475H Brassica oleracea HOM05D000984 ORTHO05D010979 2.1e-06 55.8 73 39.7
MD04G1236700 Malus domestica HOM05D000984 ORTHO05D001096 2.1e-06 55.8 85 31.8
Hund05566 Selenicereus undatus HOM05D000984 ORTHO05D001096 2.1e-06 55.8 82 32.9
Thecc.04G210700 Theobroma cacao HOM05D000984 ORTHO05D001096 2.1e-06 55.8 78 29.5
Cre16.g675749 Chlamydomonas reinhardtii HOM05D000984 ORTHO05D001096 2.8e-06 55.5 91 30.8
Sopen12g001980 Solanum pennellii HOM05D000984 ORTHO05D001096 2.8e-06 55.5 94 33.0
HPP92_013627 Vanilla planifolia HOM05D000984 ORTHO05D001096 2.8e-06 55.5 91 34.1
Dinv43868 Davidia involucrata HOM05D000172 ORTHO05D000273 3.7e-06 55.1 50 46.0
Os01g0918200 Oryza sativa ssp. japonica HOM05D000984 ORTHO05D001096 3.7e-06 55.1 95 33.7
CANSAT35G1646 Cannabis sativa HOM05D000984 ORTHO05D001096 4.8e-06 54.7 71 32.4
Cre16.g675637 Chlamydomonas reinhardtii HOM05D000984 ORTHO05D001096 4.8e-06 54.7 85 34.1
PSO017G2262 Papaver somniferum HOM05D000984 ORTHO05D001096 4.8e-06 54.7 76 36.8
PSO478G1735 Papaver somniferum HOM05D000984 ORTHO05D001096 6.2e-06 54.3 76 36.8
Aqoxy1G04189 Aquilegia oxysepala HOM05D000984 ORTHO05D001096 8.2e-06 53.9 76 34.2
COL.COLO4_05089 Corchorus olitorius HOM05D011365 ORTHO05D001096 8.2e-06 53.9 85 37.6
Thhalv10017466m.g Eutrema salsugineum HOM05D000984 ORTHO05D010979 8.2e-06 53.9 97 33.0
Nn1g07910 Nelumbo nucifera HOM05D000984 ORTHO05D001096 8.2e-06 53.9 103 33.0
Nitab4.5_0001537g0030 Nicotiana tabacum HOM05D000984 ORTHO05D025942 8.2e-06 53.9 79 30.4
Oeu026392.1 Olea europaea HOM05D000984 ORTHO05D001096 8.2e-06 53.9 82 31.7
Peaxi162Scf00235g00518 Petunia axillaris HOM05D000984 ORTHO05D001096 8.2e-06 53.9 93 32.3
Phvul.008G129000 Phaseolus vulgaris HOM05D000984 ORTHO05D001096 8.2e-06 53.9 96 33.3
Solyc12g006003.1 Solanum lycopersicum HOM05D000984 ORTHO05D001096 8.2e-06 53.9 82 31.7


User provided reference genes

Program Settings