Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 1.7e-70 269.2 139 100.0
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 5.0e-62 241.1 180 74.4
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 4.3e-53 211.5 178 66.3
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 8.3e-49 197.2 125 77.6
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 1.1e-48 196.8 123 79.7
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 3.5e-47 191.8 122 77.0
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 7.8e-47 190.7 125 74.4
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 7.8e-47 190.7 125 74.4
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 7.8e-47 190.7 123 74.8
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 3.0e-46 188.7 123 77.2
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 3.9e-46 188.3 125 74.4
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 8.6e-46 187.2 124 73.4
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 4.3e-45 184.9 125 72.8
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 2.8e-44 182.2 124 73.4
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 1.0e-43 180.3 114 76.3
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 2.3e-43 179.1 125 72.8
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 6.8e-43 177.6 115 74.8
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 6.8e-43 177.6 115 74.8
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 8.9e-43 177.2 125 71.2
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 2.0e-42 176.0 115 73.9
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 2.0e-42 176.0 125 70.4
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 2.6e-42 175.6 124 72.6
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 4.4e-42 174.9 125 71.2
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 4.4e-42 174.9 125 70.4
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 1.7e-41 172.9 123 68.3
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 1.7e-41 172.9 125 68.0
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 2.2e-41 172.6 125 68.0
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 2.2e-41 172.6 125 68.8
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 3.7e-41 171.8 125 68.8
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 3.7e-41 171.8 123 70.7
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 3.7e-41 171.8 123 67.5
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 4.9e-41 171.4 123 69.1
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 6.4e-41 171.0 123 67.5
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 6.4e-41 171.0 123 65.9
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 6.4e-41 171.0 124 71.0
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 8.3e-41 170.6 123 65.9
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 1.9e-40 169.5 123 69.1
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 2.4e-40 169.1 123 69.9
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 2.4e-40 169.1 123 69.9
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 2.4e-40 169.1 125 64.8
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 3.2e-40 168.7 125 68.0
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 3.2e-40 168.7 125 70.4
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 7.0e-40 167.5 122 68.9
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 7.0e-40 167.5 123 69.1
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 7.0e-40 167.5 123 69.1
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 9.2e-40 167.2 123 65.9
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 9.2e-40 167.2 127 70.1
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 1.6e-39 166.4 125 67.2
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.6e-39 166.4 123 65.0
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 3.5e-39 165.2 123 67.5
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 4.6e-39 164.9 125 68.0
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 4.6e-39 164.9 126 68.3
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 6.0e-39 164.5 128 67.2
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 1.3e-38 163.3 124 66.9
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 1.7e-38 162.9 123 65.9
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 1.7e-38 162.9 123 65.9
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.7e-38 162.9 98 80.6
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 2.3e-38 162.5 123 66.7
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 5.0e-38 161.4 112 71.4
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 8.6e-38 160.6 125 68.0
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.1e-37 160.2 125 66.4
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 1.1e-37 160.2 123 65.9
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 1.9e-37 159.5 123 63.4
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 1.9e-37 159.5 125 64.8
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 1.9e-37 159.5 123 62.6
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 4.3e-37 158.3 128 66.4
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 4.3e-37 158.3 123 63.4
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 4.3e-37 158.3 125 63.2
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 7.3e-37 157.5 124 63.7
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 4.7e-36 154.8 118 66.9
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 4.7e-36 154.8 118 66.9
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 8.1e-36 154.1 124 67.7
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 1.8e-35 152.9 127 63.8
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 3.1e-35 152.1 124 63.7
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 5.2e-35 151.4 91 79.1
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 8.9e-35 150.6 126 65.1
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 1.2e-34 150.2 124 62.9
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 1.5e-34 149.8 129 61.2
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 2.6e-34 149.1 125 63.2
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 2.9e-33 145.6 125 61.6
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 3.7e-33 145.2 127 58.3
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 4.9e-33 144.8 123 61.8
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 8.3e-33 144.1 125 63.2
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 8.3e-33 144.1 83 85.5
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 2.4e-32 142.5 123 58.5
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 4.1e-32 141.7 154 52.6
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 5.4e-32 141.4 125 59.2
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 6.0e-31 137.9 125 58.4
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 2.3e-30 136.0 94 73.4
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 6.6e-30 134.4 81 79.0
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 8.6e-30 134.0 84 73.8
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 1.5e-29 133.3 182 47.8
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 1.5e-29 133.3 123 56.9
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 2.5e-29 132.5 84 72.6
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 3.3e-29 132.1 110 61.8
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 3.3e-29 132.1 110 61.8
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 3.3e-29 132.1 110 61.8
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 5.6e-29 131.3 110 61.8
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 5.6e-29 131.3 149 49.7
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 5.6e-29 131.3 128 57.0
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 1.6e-28 129.8 110 60.9
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 8.1e-28 127.5 84 77.4
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 1.1e-27 127.1 79 77.2
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 1.1e-27 127.1 109 57.8
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 1.4e-27 126.7 125 56.8
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 1.8e-27 126.3 85 71.8
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 3.1e-27 125.6 79 77.2
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 1.2e-26 123.6 111 55.9
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 2.0e-26 122.9 128 50.0
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 8.4e-25 117.5 110 57.3
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 8.4e-25 117.5 79 70.9
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 2.4e-24 115.9 149 47.7
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 7.8e-23 110.9 102 58.8
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 1.3e-22 110.2 125 48.8
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 3.0e-22 109.0 91 61.5
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 6.6e-22 107.8 65 76.9
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 8.9e-19 97.4 91 59.3
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 2.6e-18 95.9 121 46.3
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 5.8e-18 94.7 131 42.0
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 1.4e-16 90.1 83 55.4
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 2.1e-15 86.3 65 66.2
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 1.3e-14 83.6 78 55.1
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 8.7e-14 80.9 78 53.8
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 1.3e-12 77.0 93 48.4
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 3.6e-12 75.5 71 46.5
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 8.1e-12 74.3 50 64.0
Nn2g14856 Nelumbo nucifera HOM05D005995 ORTHO05D007362 1.4e-11 73.6 60 61.7
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 2.4e-11 72.8 64 56.2
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-11 72.4 74 48.6
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 3.4e-10 68.9 45 66.7


User provided reference genes

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