Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 5.5e-234 813.9 409 100.0
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.2e-227 792.0 408 97.1
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 5.6e-194 681.0 419 81.9
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 2.4e-181 639.0 385 83.6
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 1.1e-152 543.9 418 70.3
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 9.9e-151 537.3 412 67.0
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 3.8e-150 535.4 422 66.4
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.8e-147 526.6 418 65.6
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 1.5e-146 523.5 410 67.1
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 4.3e-146 521.9 398 68.1
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 5.6e-146 521.5 421 66.7
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 9.6e-146 520.8 418 64.8
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 1.1e-144 517.3 415 64.6
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 6.9e-144 514.6 428 64.3
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.4e-143 512.3 411 65.0
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 1.0e-142 510.8 398 66.8
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 2.2e-142 509.6 413 65.1
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 4.9e-142 508.4 408 66.2
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.1e-141 507.3 414 64.5
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 1.1e-141 507.3 419 64.2
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 1.9e-141 506.5 419 64.2
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 2.5e-141 506.1 417 62.8
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 4.2e-141 505.4 417 62.6
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 2.1e-140 503.1 402 65.9
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 2.1e-140 503.1 402 65.9
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 3.5e-140 502.3 418 63.9
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 4.6e-140 501.9 416 65.6
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 6.1e-140 501.5 403 65.3
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.1e-138 497.3 408 64.7
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 1.5e-138 496.9 408 64.0
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 2.5e-138 496.1 408 64.2
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 5.7e-138 495.0 412 62.1
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 9.7e-138 494.2 415 62.7
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 6.3e-137 491.5 409 64.1
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 1.8e-136 490.0 417 64.0
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 1.2e-135 487.3 408 63.2
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.2e-135 487.3 415 63.9
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 3.4e-135 485.7 412 61.2
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 4.5e-135 485.3 400 63.0
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 4.5e-135 485.3 416 61.3
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 7.7e-135 484.6 413 62.2
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.0e-134 484.2 399 64.4
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 1.7e-134 483.4 412 62.9
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 3.8e-134 482.3 406 63.3
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 2.5e-133 479.6 412 63.6
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 3.2e-133 479.2 412 63.6
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 5.5e-133 478.4 412 63.6
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 7.9e-132 474.6 399 64.7
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 1.4e-131 473.8 426 59.9
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 3.0e-131 472.6 411 61.3
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 8.8e-131 471.1 412 60.4
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 8.8e-131 471.1 371 66.6
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 1.1e-130 470.7 399 60.7
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.5e-130 470.3 410 60.7
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 4.3e-130 468.8 410 60.0
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 5.7e-130 468.4 408 61.0
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.3e-129 467.2 445 58.7
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 2.8e-129 466.1 399 60.7
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 5.3e-128 461.8 410 58.8
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 5.3e-128 461.8 399 59.9
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 2.9e-126 456.1 415 60.2
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 3.8e-126 455.7 399 61.4
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 3.2e-125 452.6 383 62.1
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.7e-124 448.7 337 66.8
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 6.7e-123 444.9 421 57.0
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 6.7e-123 444.9 401 57.6
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 8.8e-123 444.5 418 59.6
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 1.5e-122 443.7 422 60.0
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 2.6e-122 443.0 413 59.1
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 2.0e-119 433.3 410 58.0
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 2.6e-119 433.0 411 56.0
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 5.9e-119 431.8 371 63.9
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 7.7e-119 431.4 468 54.7
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.7e-118 430.3 411 56.7
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 8.5e-118 427.9 409 59.4
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 1.9e-117 426.8 358 64.5
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 4.7e-116 422.2 312 68.6
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 1.0e-115 421.0 380 58.2
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 3.9e-115 419.1 410 58.3
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 1.1e-114 417.5 410 56.1
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 1.5e-114 417.2 414 55.1
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 9.7e-114 414.5 355 62.5
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.2e-109 399.4 401 56.9
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 4.2e-109 399.1 413 54.0
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 4.7e-108 395.6 428 51.6
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 1.8e-104 383.6 356 54.2
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 2.7e-103 379.8 399 51.6
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 6.8e-99 365.2 414 52.2
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 8.3e-97 358.2 416 46.9
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 1.1e-96 357.8 369 53.7
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 8.6e-94 348.2 361 54.3
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.1e-93 347.8 331 57.7
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.8e-91 340.5 338 55.9
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.0e-91 339.7 299 61.2
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.0e-91 339.7 340 55.6
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 4.0e-91 339.3 472 42.4
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 1.5e-90 337.4 326 53.1
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.7e-90 335.5 299 60.5
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.7e-90 335.5 299 60.5
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 5.7e-90 335.5 299 60.5
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 1.2e-87 327.8 440 42.7
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 1.9e-85 320.5 217 76.5
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 3.9e-78 296.2 296 54.1
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 2.2e-73 280.4 285 55.4
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 1.5e-66 257.7 216 63.0
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 2.2e-65 253.8 250 57.6
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 4.9e-65 252.7 269 50.6
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 5.1e-54 216.1 596 30.0
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.7e-31 140.6 93 75.3
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.3e-30 138.3 206 40.8
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.1e-29 135.2 137 55.5
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.1e-27 128.6 179 41.9
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 8.7e-22 109.0 159 42.1
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.3e-20 105.1 122 48.4
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-12 78.6 82 62.2
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-12 78.6 82 62.2
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-12 78.6 82 62.2
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 2.9e-09 67.4 47 70.2
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 5.0e-09 66.6 56 60.7


User provided reference genes

Program Settings