Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62000980 Chenopodium quinoa HOM05D005899 ORTHO05D007445 1.3e-54 216.1 106 100.0
AUR62000983 Chenopodium quinoa HOM05D005899 ORTHO05D007445 4.7e-36 154.5 91 82.4
AUR62004976 Chenopodium quinoa HOM05D005899 ORTHO05D007445 2.3e-35 152.1 91 80.2
EL10Ac4g09173 Beta vulgaris HOM05D005899 ORTHO05D007445 4.9e-33 144.4 97 75.3
FAN05G2237 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.8e-27 125.9 98 66.3
FAN14G1139 Fragaria x ananassa HOM05D005899 ORTHO05D007445 3.1e-27 125.2 98 65.3
Sc13g0006240 Simmondsia chinensis HOM05D005899 ORTHO05D007445 3.1e-27 125.2 83 74.7
RcHm_v2.0_Chr3g0451931 Rosa chinensis HOM05D005899 ORTHO05D007445 5.2e-27 124.4 98 65.3
QL03p024530 Quercus lobata HOM05D005899 ORTHO05D007445 1.5e-26 122.9 97 63.9
FvH4_6g03430 Fragaria vesca HOM05D005899 ORTHO05D007445 2.0e-26 122.5 96 63.5
FAN05G4109 Fragaria x ananassa HOM05D005899 ORTHO05D007445 2.6e-26 122.1 99 62.6
PGR083G2155 Punica granatum HOM05D005899 ORTHO05D007445 3.4e-26 121.7 82 68.3
Prupe.6G339900 Prunus persica HOM05D005899 ORTHO05D007445 5.8e-26 120.9 89 64.0
Cfa006459 Carpinus fangiana HOM05D005899 ORTHO05D007445 7.5e-26 120.6 87 63.2
Nn4g26305 Nelumbo nucifera HOM05D005899 ORTHO05D007445 7.5e-26 120.6 87 69.0
CSS0047717 Camellia sinensis var. sinensis HOM05D005899 ORTHO05D007445 9.8e-26 120.2 86 69.8
FAN02G1821 Fragaria x ananassa HOM05D005899 ORTHO05D007445 1.7e-25 119.4 90 64.4
Sopen01g041400 Solanum pennellii HOM05D005899 ORTHO05D007445 1.7e-25 119.4 90 66.7
CiPaw.07G006200 Carya illinoinensis HOM05D005899 ORTHO05D007445 2.2e-25 119.0 87 65.5
Solyc01g097800.3 Solanum lycopersicum HOM05D005899 ORTHO05D007445 2.9e-25 118.6 90 66.7
TAR362G0589 Trochodendron aralioides HOM05D005899 ORTHO05D007445 2.9e-25 118.6 88 64.8
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 4.9e-25 117.9 92 64.1
PGSC0003DMG400022509 Solanum tuberosum HOM05D005899 ORTHO05D007445 6.4e-25 117.5 90 65.6
FAN09G0887 Fragaria x ananassa HOM05D005899 ORTHO05D007445 8.3e-25 117.1 97 62.9
QL03p024564 Quercus lobata HOM05D005899 ORTHO05D007445 1.1e-24 116.7 92 64.1
MD12G1237200 Malus domestica HOM05D005899 ORTHO05D007445 1.4e-24 116.3 86 64.0
Manes.09G155900 Manihot esculenta HOM05D005899 ORTHO05D007445 1.4e-24 116.3 94 60.6
Nitab4.5_0002361g0040 Nicotiana tabacum HOM05D005899 ORTHO05D007445 5.4e-24 114.4 91 62.6
DCAR_006615 Daucus carota HOM05D005899 ORTHO05D007445 7.0e-24 114.0 95 64.2
Actinidia05763 Actinidia chinensis HOM05D005899 ORTHO05D007445 9.2e-24 113.6 90 62.2
Actinidia36917 Actinidia chinensis HOM05D005899 ORTHO05D007445 9.2e-24 113.6 90 62.2
BcaB03g11648 Brassica carinata HOM05D005899 ORTHO05D007445 9.2e-24 113.6 90 61.1
CAN.G134.162 Capsicum annuum HOM05D005899 ORTHO05D007445 9.2e-24 113.6 90 62.2
Cpa.g.sc117.66 Carica papaya HOM05D005899 ORTHO05D007445 9.2e-24 113.6 98 61.2
Duzib177G0382 Durio zibethinus HOM05D005899 ORTHO05D007445 1.2e-23 113.2 96 57.3
Gorai.007G285000 Gossypium raimondii HOM05D005899 ORTHO05D007445 1.2e-23 113.2 96 60.4
Duzib128G1862 Durio zibethinus HOM05D005899 ORTHO05D007445 1.6e-23 112.8 96 59.4
Gohir.A11G255200 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.6e-23 112.8 96 60.4
Gohir.D11G264900 Gossypium hirsutum HOM05D005899 ORTHO05D007445 1.6e-23 112.8 96 60.4
Cc02_g31760 Coffea canephora HOM05D005899 ORTHO05D007445 2.0e-23 112.5 98 62.2
MBI01_g13083_MAGBIO Magnolia biondii HOM05D005899 ORTHO05D007445 2.0e-23 112.5 85 63.5
Oeu064565.1 Olea europaea HOM05D005899 ORTHO05D007445 2.0e-23 112.5 98 59.2
Potri.005G050600 Populus trichocarpa HOM05D005899 ORTHO05D007445 2.0e-23 112.5 89 61.8
Sabra15G0041400 Salix brachista HOM05D005899 ORTHO05D007445 2.0e-23 112.5 89 61.8
Sabra15G0068500 Salix brachista HOM05D005899 ORTHO05D007445 2.0e-23 112.5 89 61.8
Ciclev10001942m.g Citrus clementina HOM05D005899 ORTHO05D007445 2.7e-23 112.1 85 64.7
HanXRQChr02g0057281 Helianthus annuus HOM05D005899 ORTHO05D007445 2.7e-23 112.1 84 66.7
BraA05t22981Z Brassica rapa HOM05D005899 ORTHO05D007445 3.5e-23 111.7 93 60.2
Lalb_Chr15g0076871 Lupinus albus HOM05D005899 ORTHO05D007445 3.5e-23 111.7 92 56.5
TWI56G0091 Tripterygium wilfordii HOM05D005899 ORTHO05D007445 3.5e-23 111.7 83 63.9
AT3G04880 Arabidopsis thaliana HOM05D005899 ORTHO05D007445 4.6e-23 111.3 93 58.1
Atru.chr2.742 Acer truncatum HOM05D005899 ORTHO05D007445 6.0e-23 110.9 86 62.8
Ciclev10001941m.g Citrus clementina HOM05D005899 ORTHO05D007445 6.0e-23 110.9 85 64.7
Atru.chr2.732 Acer truncatum HOM05D005899 ORTHO05D007445 7.8e-23 110.5 86 62.8
Atru.chr2.745 Acer truncatum HOM05D005899 ORTHO05D007445 7.8e-23 110.5 86 62.8
BcaNung06538 Brassica carinata HOM05D005899 ORTHO05D007445 7.8e-23 110.5 93 57.0
A05p42720 Brassica napus HOM05D005899 ORTHO05D007445 7.8e-23 110.5 93 59.1
C05p62440 Brassica napus HOM05D005899 ORTHO05D007445 7.8e-23 110.5 93 57.0
Carub.0003s0408 Capsella rubella HOM05D005899 ORTHO05D007445 7.8e-23 110.5 91 59.3
Lj7P487T33 Lonicera japonica HOM05D005899 ORTHO05D007445 7.8e-23 110.5 90 64.4
BolC5t34897H Brassica oleracea HOM05D005899 ORTHO05D007445 1.0e-22 110.2 95 56.8
arahy.Tifrunner.gnm1.ann1.41KAT0 Arachis hypogaea HOM05D005899 ORTHO05D007445 1.3e-22 109.8 95 57.9
CANSAT54G2589 Cannabis sativa HOM05D005899 ORTHO05D007445 1.3e-22 109.8 95 58.9
PSO761G0524 Papaver somniferum HOM05D005899 ORTHO05D007445 1.3e-22 109.8 87 62.1
vmacro14199 Vaccinium macrocarpon HOM05D005899 ORTHO05D007445 1.7e-22 109.4 105 59.0
unitig_744.g24569 Utricularia gibba HOM05D005899 ORTHO05D007445 3.0e-22 108.6 96 57.3
Eucgr.L01763 Eucalyptus grandis HOM05D005899 ORTHO05D007445 3.9e-22 108.2 90 57.8
Rhsim07G0131800 Rhododendron simsii HOM05D005899 ORTHO05D007445 3.9e-22 108.2 102 60.8
Oeu044665.1 Olea europaea HOM05D005899 ORTHO05D007445 5.0e-22 107.8 89 62.9
CDE05G2514 Ceratophyllum demersum HOM05D005899 ORTHO05D007445 6.6e-22 107.5 81 64.2
Cfa006460 Carpinus fangiana HOM05D005899 ORTHO05D007445 1.1e-21 106.7 88 59.1
Glyma.19G243000 Glycine max HOM05D005899 ORTHO05D007445 1.5e-21 106.3 85 60.0
Sed0018425 Sechium edule HOM05D005899 ORTHO05D007445 1.5e-21 106.3 83 63.9
CARHR079150 Cardamine hirsuta HOM05D005899 ORTHO05D007445 1.9e-21 105.9 93 55.9
Aa31LG5G15270 Aethionema arabicum HOM05D005899 ORTHO05D007445 2.5e-21 105.5 83 60.2
THA.LOC104802822 Tarenaya hassleriana HOM05D005899 ORTHO05D007445 2.5e-21 105.5 83 61.4
Thecc.05G288500 Theobroma cacao HOM05D005899 ORTHO05D007445 2.5e-21 105.5 88 60.2
ECA233G4289 Erigeron canadensis HOM05D005899 ORTHO05D007445 3.3e-21 105.1 86 58.1
Phvul.006G099800 Phaseolus vulgaris HOM05D005899 ORTHO05D007445 3.3e-21 105.1 84 60.7
VMungo0540G1799 Vigna mungo HOM05D005899 ORTHO05D007445 4.3e-21 104.8 84 60.7
Migut.N00303 Erythranthe guttata HOM05D005899 ORTHO05D007445 5.6e-21 104.4 102 54.9
SEGI_33796 Sequoiadendron giganteum HOM05D005899 ORTHO05D007445 9.5e-21 103.6 87 56.3
Psat0s62g0080 Pisum sativum HOM05D005899 ORTHO05D007445 1.6e-20 102.8 86 55.8
TPR.G21843 Trifolium pratense HOM05D005899 ORTHO05D007445 2.1e-20 102.4 85 58.8
Lsat_1_v5_gn_6_53000 Lactuca sativa HOM05D005899 ORTHO05D007445 2.8e-20 102.1 85 60.0
Lj1g0012490 Lotus japonicus HOM05D005899 ORTHO05D007445 8.1e-20 100.5 83 60.2
Medtr7g114750 Medicago truncatula HOM05D005899 ORTHO05D007445 8.1e-20 100.5 89 55.1
SGA_v2.0_scaffold517G52669 Striga asiatica HOM05D005899 ORTHO05D007445 1.1e-19 100.1 81 61.7
TPR.G6971 Trifolium pratense HOM05D005899 ORTHO05D007445 1.1e-19 100.1 85 56.5
Ca_09408_v3 Cicer arietinum L. HOM05D005899 ORTHO05D007445 3.1e-19 98.6 90 53.3
HPP92_023141 Vanilla planifolia HOM05D005899 ORTHO05D007445 5.2e-19 97.8 84 58.3
ATR0681G168 Amborella trichopoda HOM05D005899 ORTHO05D007445 8.9e-19 97.1 95 52.6
SHI18352 Sapria himalayana HOM05D005899 ORTHO05D007445 2.0e-18 95.9 95 51.6
Medtr8g098320 Medicago truncatula HOM05D005899 ORTHO05D007445 5.8e-18 94.4 87 55.2
Pp3c6_4500 Physcomitrium patens HOM05D005899 ORTHO05D007445 2.1e-15 85.9 97 46.4
Sp3g03700 Schrenkiella parvula HOM05D005899 ORTHO05D007445 5.1e-14 81.3 93 46.2
AUR62004985 Chenopodium quinoa HOM05D005899 ORTHO05D007445 6.6e-14 80.9 42 90.5
Medtr7g114730 Medicago truncatula HOM05D005899 ORTHO05D007445 1.1e-13 80.1 86 47.7
SMO367G0143 Selaginella moellendorffii HOM05D005899 ORTHO05D007445 7.3e-13 77.4 78 50.0
Os01g0542000 Oryza sativa ssp. japonica HOM05D005899 ORTHO05D007445 5.8e-10 67.8 87 43.7
Eucgr.B01710 Eucalyptus grandis HOM05D005899 ORTHO05D007445 2.9e-09 65.5 92 44.6
Eucgr.B01712 Eucalyptus grandis HOM05D005899 ORTHO05D007445 4.9e-09 64.7 92 45.7
Zm00001eb162780 Zea mays HOM05D005899 ORTHO05D007445 1.1e-08 63.5 85 42.4
Haze_04330 Corylus avellana HOM05D005899 ORTHO05D007445 1.4e-08 63.2 60 51.7


User provided reference genes

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