Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1149G139 Amborella trichopoda HOM05D000104 ORTHO05D026582 2.8e-72 275.0 126 100.0
ATR0680G059 Amborella trichopoda HOM05D000104 ORTHO05D004024 8.9e-26 120.6 85 71.8
CSS0043783 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D004024 2.6e-09 65.9 77 44.2
TWI14G1411 Tripterygium wilfordii HOM05D000104 ORTHO05D004024 3.4e-09 65.5 96 40.6
TAR375G0536 Trochodendron aralioides HOM05D000104 ORTHO05D004024 3.4e-09 65.5 95 36.8
Dinv32495 Davidia involucrata HOM05D000104 ORTHO05D004024 4.5e-09 65.1 77 44.2
PSO478G3174 Papaver somniferum HOM05D000104 ORTHO05D004024 4.5e-09 65.1 76 43.4
PSO782G4172 Papaver somniferum HOM05D000104 ORTHO05D004024 5.8e-09 64.7 76 43.4
Lj7C510T14 Lonicera japonica HOM05D000104 ORTHO05D004024 9.9e-09 63.9 77 42.9
Atru.chr5.516 Acer truncatum HOM05D000104 ORTHO05D004024 1.3e-08 63.5 77 45.5
Ciclev10018438m.g Citrus clementina HOM05D000104 ORTHO05D004024 1.7e-08 63.2 82 41.5
Haze_15527 Corylus avellana HOM05D000104 ORTHO05D004024 2.2e-08 62.8 77 42.9
Cfa003903 Carpinus fangiana HOM05D000104 ORTHO05D004024 2.9e-08 62.4 77 42.9
Glyma.18G234700 Glycine max HOM05D000104 ORTHO05D004024 2.9e-08 62.4 77 42.9
QL04p053980 Quercus lobata HOM05D000104 ORTHO05D004024 2.9e-08 62.4 79 41.8
TAR374G1169 Trochodendron aralioides HOM05D000104 ORTHO05D004024 2.9e-08 62.4 75 42.7
Thecc.01G357200 Theobroma cacao HOM05D000104 ORTHO05D004024 4.9e-08 61.6 77 42.9
TWI23G0799 Tripterygium wilfordii HOM05D000104 ORTHO05D004024 6.4e-08 61.2 80 43.8
Medtr8g030550 Medicago truncatula HOM05D000104 ORTHO05D004024 8.4e-08 60.8 77 40.3
GSVIVG01026952001 Vitis vinifera HOM05D000104 ORTHO05D004024 8.4e-08 60.8 81 43.2
Psat4g212400 Pisum sativum HOM05D000104 ORTHO05D004024 1.1e-07 60.5 77 40.3
ClCG05G001450 Citrullus lanatus HOM05D000104 ORTHO05D004024 1.4e-07 60.1 79 41.8
Sed0000619 Sechium edule HOM05D000104 ORTHO05D004024 1.4e-07 60.1 79 40.5
Dinv43833 Davidia involucrata HOM05D000104 ORTHO05D004024 1.9e-07 59.7 58 44.8
Manes.05G032800 Manihot esculenta HOM05D000104 ORTHO05D004024 1.9e-07 59.7 91 38.5
Medtr7g078090 Medicago truncatula HOM05D000104 ORTHO05D004024 2.4e-07 59.3 73 42.5
Prupe.2G172900 Prunus persica HOM05D000104 ORTHO05D004024 2.4e-07 59.3 79 43.0
Ca_23613_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004024 3.2e-07 58.9 65 49.2
Phvul.008G061000 Phaseolus vulgaris HOM05D000104 ORTHO05D004024 3.2e-07 58.9 77 41.6
FvH4_7g14720 Fragaria vesca HOM05D000104 ORTHO05D004024 4.2e-07 58.5 98 33.7
FAN06G0929 Fragaria x ananassa HOM05D000104 ORTHO05D004024 4.2e-07 58.5 98 33.7
FAN06G2979 Fragaria x ananassa HOM05D000104 ORTHO05D004024 4.2e-07 58.5 98 33.7
FAN10G0475 Fragaria x ananassa HOM05D000104 ORTHO05D004024 4.2e-07 58.5 98 33.7
FAN10G3702 Fragaria x ananassa HOM05D000104 ORTHO05D004024 4.2e-07 58.5 98 33.7
Glyma.09G257900 Glycine max HOM05D000104 ORTHO05D004024 4.2e-07 58.5 77 40.3
VMungo1383G0951 Vigna mungo HOM05D000104 ORTHO05D004024 4.2e-07 58.5 77 40.3
Aqoxy7G00269 Aquilegia oxysepala HOM05D000104 ORTHO05D004024 5.5e-07 58.2 77 37.7
Psat3g107600 Pisum sativum HOM05D000104 ORTHO05D004024 5.5e-07 58.2 75 40.0
Psat5g241000 Pisum sativum HOM05D000104 ORTHO05D026582 5.5e-07 58.2 65 47.7
COL.COLO4_12730 Corchorus olitorius HOM05D000104 ORTHO05D004024 7.1e-07 57.8 77 41.6
MELO3C006101.2 Cucumis melo HOM05D000104 ORTHO05D004024 7.1e-07 57.8 79 40.5
CsaV3_3G008840 Cucumis sativus L. HOM05D000104 ORTHO05D004024 7.1e-07 57.8 79 40.5
Duzib268G0692 Durio zibethinus HOM05D000104 ORTHO05D004024 7.1e-07 57.8 77 40.3
FAN03G1309 Fragaria x ananassa HOM05D000104 ORTHO05D004024 7.1e-07 57.8 98 33.7
Gohir.D07G147500 Gossypium hirsutum HOM05D000104 ORTHO05D004024 7.1e-07 57.8 77 39.0
Gorai.001G168700 Gossypium raimondii HOM05D000104 ORTHO05D004024 7.1e-07 57.8 77 39.0
Lalb_Chr17g0339481 Lupinus albus HOM05D000104 ORTHO05D004024 7.1e-07 57.8 77 39.0
RcHm_v2.0_Chr1g0356661 Rosa chinensis HOM05D000104 ORTHO05D004024 7.1e-07 57.8 98 34.7
Ca_07936_v3 Cicer arietinum L. HOM05D000104 ORTHO05D004024 9.3e-07 57.4 84 39.3
Gohir.A11G090000 Gossypium hirsutum HOM05D000104 ORTHO05D004024 9.3e-07 57.4 77 39.0
FAN01G0653 Fragaria x ananassa HOM05D000104 ORTHO05D004024 1.2e-06 57.0 98 32.7
Gorai.008G121100 Gossypium raimondii HOM05D000104 ORTHO05D004024 1.2e-06 57.0 77 40.3
Nn6g33365 Nelumbo nucifera HOM05D000104 ORTHO05D004024 1.2e-06 57.0 79 40.5
Actinidia20892 Actinidia chinensis HOM05D000104 ORTHO05D004024 1.6e-06 56.6 77 41.6
Gohir.A12G108600 Gossypium hirsutum HOM05D000104 ORTHO05D004024 1.6e-06 56.6 77 40.3
Phvul.010G100100 Phaseolus vulgaris HOM05D000104 ORTHO05D004024 1.6e-06 56.6 77 37.7
CANSAT56G1829 Cannabis sativa HOM05D000104 ORTHO05D004024 2.1e-06 56.2 79 40.5
Lalb_Chr10g0096851 Lupinus albus HOM05D000104 ORTHO05D004024 2.1e-06 56.2 77 39.0
Hund16655 Selenicereus undatus HOM05D000104 ORTHO05D004024 2.1e-06 56.2 69 43.5
arahy.Tifrunner.gnm1.ann1.8BN0DB Arachis hypogaea HOM05D000104 ORTHO05D004024 2.7e-06 55.8 75 38.7
arahy.Tifrunner.gnm1.ann1.AXD4AC Arachis hypogaea HOM05D000104 ORTHO05D004024 2.7e-06 55.8 75 38.7
CiPaw.02G032300 Carya illinoinensis HOM05D000104 ORTHO05D004024 2.7e-06 55.8 59 47.5
Gohir.A07G141800 Gossypium hirsutum HOM05D000104 ORTHO05D004024 2.7e-06 55.8 60 45.0
MD07G1134800 Malus domestica HOM05D000104 ORTHO05D004024 2.7e-06 55.8 95 34.7
TPR.G16549 Trifolium pratense HOM05D000104 ORTHO05D004024 2.7e-06 55.8 77 37.7
Lj3g0005670 Lotus japonicus HOM05D000104 ORTHO05D004024 3.5e-06 55.5 57 47.4
vmacro20931 Vaccinium macrocarpon HOM05D000104 ORTHO05D004024 3.5e-06 55.5 77 37.7
Gohir.D12G111700 Gossypium hirsutum HOM05D000104 ORTHO05D004024 4.6e-06 55.1 77 39.0
MBI18_g02828_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D004024 4.6e-06 55.1 78 41.0
Cc02_g38210 Coffea canephora HOM05D000104 ORTHO05D004024 6.0e-06 54.7 82 34.1
Glyma.07G069400 Glycine max HOM05D000104 ORTHO05D004024 6.0e-06 54.7 77 36.4
Gohir.D11G094400 Gossypium hirsutum HOM05D000104 ORTHO05D004024 7.9e-06 54.3 77 37.7
Gorai.007G100800 Gossypium raimondii HOM05D000104 ORTHO05D004024 7.9e-06 54.3 77 37.7


User provided reference genes

Program Settings