Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1147G045 Amborella trichopoda HOM05D005229 ORTHO05D006378 1.7e-120 436.0 224 100.0
MBI07_g06134_MAGBIO Magnolia biondii HOM05D005229 ORTHO05D006378 2.8e-86 322.4 225 77.8
TWI36G1337 Tripterygium wilfordii HOM05D005229 ORTHO05D006378 1.0e-85 320.5 203 81.3
MSTRG.17960 Avicennia marina HOM05D005229 ORTHO05D006378 2.3e-85 319.3 224 74.6
Oeu025298.1 Olea europaea HOM05D005229 ORTHO05D006378 8.9e-85 317.4 224 75.0
QL01p048658 Quercus lobata HOM05D005229 ORTHO05D006378 8.9e-85 317.4 201 81.1
Oeu013526.1 Olea europaea HOM05D005229 ORTHO05D006378 1.5e-84 316.6 225 74.2
Lj2P1112T20 Lonicera japonica HOM05D005229 ORTHO05D006378 2.6e-84 315.8 204 79.4
TAR365G0963 Trochodendron aralioides HOM05D005229 ORTHO05D006378 4.4e-84 315.1 223 74.9
TWI18G1321 Tripterygium wilfordii HOM05D005229 ORTHO05D006378 5.7e-84 314.7 202 81.2
Peaxi162Scf00841g00210 Petunia axillaris HOM05D005229 ORTHO05D006378 7.5e-84 314.3 226 73.0
CDE06G2797 Ceratophyllum demersum HOM05D005229 ORTHO05D006378 9.8e-84 313.9 224 75.0
CiPaw.07G079800 Carya illinoinensis HOM05D005229 ORTHO05D006378 1.3e-83 313.5 202 80.2
GSVIVG01019114001 Vitis vinifera HOM05D005229 ORTHO05D006378 2.9e-83 312.4 202 79.2
SGA_v2.0_scaffold29G12061 Striga asiatica HOM05D005229 ORTHO05D006378 3.7e-83 312.0 225 73.3
MSTRG.12743 Avicennia marina HOM05D005229 ORTHO05D006378 4.9e-83 311.6 224 75.0
Hund07343 Selenicereus undatus HOM05D005229 ORTHO05D006378 6.4e-83 311.2 202 78.7
arahy.Tifrunner.gnm1.ann1.MF538D Arachis hypogaea HOM05D005229 ORTHO05D006378 1.1e-82 310.5 219 73.5
HanXRQChr12g0363961 Helianthus annuus HOM05D005229 ORTHO05D006378 1.1e-82 310.5 224 72.8
arahy.Tifrunner.gnm1.ann1.18YQBF Arachis hypogaea HOM05D005229 ORTHO05D006378 1.4e-82 310.1 219 73.5
Nn1g09761 Nelumbo nucifera HOM05D005229 ORTHO05D006378 1.8e-82 309.7 223 72.6
Prupe.6G361000 Prunus persica HOM05D005229 ORTHO05D006378 1.8e-82 309.7 202 77.7
PGR083G1330 Punica granatum HOM05D005229 ORTHO05D006378 1.8e-82 309.7 227 71.4
SalBow3G3798 Salvia bowleyana HOM05D005229 ORTHO05D006378 1.8e-82 309.7 224 72.8
EL10Ac4g09972 Beta vulgaris HOM05D005229 ORTHO05D006378 2.4e-82 309.3 202 78.7
vmacro14690 Vaccinium macrocarpon HOM05D005229 ORTHO05D006378 2.4e-82 309.3 226 71.7
AUR62006659 Chenopodium quinoa HOM05D005229 ORTHO05D006378 4.1e-82 308.5 223 73.1
Lsat_1_v5_gn_8_98481 Lactuca sativa HOM05D005229 ORTHO05D006378 5.4e-82 308.1 225 71.6
VMungo1383G0609 Vigna mungo HOM05D005229 ORTHO05D006378 5.4e-82 308.1 222 72.5
Actinidia34531 Actinidia chinensis HOM05D005229 ORTHO05D006378 7.0e-82 307.8 226 71.2
DCAR_018610 Daucus carota HOM05D005229 ORTHO05D006378 7.0e-82 307.8 224 71.9
Rhsim01G0247800 Rhododendron simsii HOM05D005229 ORTHO05D006378 7.0e-82 307.8 227 72.7
Lalb_Chr19g0127611 Lupinus albus HOM05D005229 ORTHO05D006378 9.2e-82 307.4 219 72.6
FAN05G0704 Fragaria x ananassa HOM05D005229 ORTHO05D006378 1.2e-81 307.0 202 77.2
CSS0044510 Camellia sinensis var. sinensis HOM05D005229 ORTHO05D006378 1.6e-81 306.6 201 77.6
Glyma.09G250800 Glycine max HOM05D005229 ORTHO05D006378 1.6e-81 306.6 219 73.1
Glyma.18G241700 Glycine max HOM05D005229 ORTHO05D006378 1.6e-81 306.6 219 72.6
Lalb_Chr01g0020361 Lupinus albus HOM05D005229 ORTHO05D006378 1.6e-81 306.6 208 75.0
Cfa006268 Carpinus fangiana HOM05D005229 ORTHO05D006378 2.0e-81 306.2 202 77.7
HanXRQChr08g0231801 Helianthus annuus HOM05D005229 ORTHO05D006378 2.0e-81 306.2 200 77.5
Cpa.g.sc8.42 Carica papaya HOM05D005229 ORTHO05D006378 2.7e-81 305.8 226 73.0
AUR62000314 Chenopodium quinoa HOM05D005229 ORTHO05D006378 2.7e-81 305.8 223 72.6
FAN14G1738 Fragaria x ananassa HOM05D005229 ORTHO05D006378 2.7e-81 305.8 201 77.6
Thecc.05G199500 Theobroma cacao HOM05D005229 ORTHO05D006378 2.7e-81 305.8 202 78.2
Cc01_g15890 Coffea canephora HOM05D005229 ORTHO05D006378 3.5e-81 305.4 226 72.1
DCAR_012704 Daucus carota HOM05D005229 ORTHO05D006378 3.5e-81 305.4 226 71.7
ECA236G3288 Erigeron canadensis HOM05D005229 ORTHO05D006378 3.5e-81 305.4 226 71.2
Phvul.008G054400 Phaseolus vulgaris HOM05D005229 ORTHO05D006378 3.5e-81 305.4 219 72.1
unitig_0.g420 Utricularia gibba HOM05D005229 ORTHO05D006378 3.5e-81 305.4 226 70.8
AL9U11740 Arabidopsis lyrata HOM05D005229 ORTHO05D006378 4.6e-81 305.1 226 70.8
Haze_04550 Corylus avellana HOM05D005229 ORTHO05D006378 4.6e-81 305.1 202 78.7
FAN02G4095 Fragaria x ananassa HOM05D005229 ORTHO05D006378 5.9e-81 304.7 201 77.1
Medtr7g079900 Medicago truncatula HOM05D005229 ORTHO05D006378 5.9e-81 304.7 219 69.9
Potri.002G239700 Populus trichocarpa HOM05D005229 ORTHO05D006378 5.9e-81 304.7 224 74.1
FvH4_6g00530 Fragaria vesca HOM05D005229 ORTHO05D006378 1.0e-80 303.9 222 72.5
FAN09G4314 Fragaria x ananassa HOM05D005229 ORTHO05D006378 1.0e-80 303.9 222 72.5
THA.LOC104808816 Tarenaya hassleriana HOM05D005229 ORTHO05D006378 1.0e-80 303.9 226 71.7
CANSAT54G2118 Cannabis sativa HOM05D005229 ORTHO05D006378 1.3e-80 303.5 224 71.9
Gorai.001G101200 Gossypium raimondii HOM05D005229 ORTHO05D006378 1.3e-80 303.5 208 76.0
Lj1g0022024 Lotus japonicus HOM05D005229 ORTHO05D006378 1.3e-80 303.5 226 71.2
MD04G1244400 Malus domestica HOM05D005229 ORTHO05D006378 1.3e-80 303.5 202 76.2
MD12G1260300 Malus domestica HOM05D005229 ORTHO05D006378 1.3e-80 303.5 202 76.2
Sp7g09420 Schrenkiella parvula HOM05D005229 ORTHO05D006378 1.3e-80 303.5 226 70.4
Ca_07979_v3 Cicer arietinum L. HOM05D005229 ORTHO05D006378 1.7e-80 303.1 219 70.3
RcHm_v2.0_Chr3g0447921 Rosa chinensis HOM05D005229 ORTHO05D006378 1.7e-80 303.1 222 72.5
unitig_60.g25573 Utricularia gibba HOM05D005229 ORTHO05D006378 1.7e-80 303.1 224 72.8
CAN.G874.38 Capsicum annuum HOM05D005229 ORTHO05D006378 2.3e-80 302.8 224 73.2
CAN.G874.39 Capsicum annuum HOM05D005229 ORTHO05D006378 2.3e-80 302.8 224 73.2
SEGI_02964 Sequoiadendron giganteum HOM05D005229 ORTHO05D006378 2.3e-80 302.8 173 85.5
CARHR218150 Cardamine hirsuta HOM05D005229 ORTHO05D006378 3.0e-80 302.4 226 69.5
ECA247G0242 Erigeron canadensis HOM05D005229 ORTHO05D006378 3.0e-80 302.4 200 77.0
BcaC02g09463 Brassica carinata HOM05D005229 ORTHO05D006378 3.9e-80 302.0 226 69.9
A04p09140 Brassica napus HOM05D005229 ORTHO05D006378 3.9e-80 302.0 226 69.9
C04p43050 Brassica napus HOM05D005229 ORTHO05D006378 3.9e-80 302.0 226 69.9
BolC4t25883H Brassica oleracea HOM05D005229 ORTHO05D006378 3.9e-80 302.0 226 69.9
Migut.D00776 Erythranthe guttata HOM05D005229 ORTHO05D006378 3.9e-80 302.0 226 69.0
Thhalv10026195m.g Eutrema salsugineum HOM05D005229 ORTHO05D006378 3.9e-80 302.0 226 69.9
TPR.G30351 Trifolium pratense HOM05D005229 ORTHO05D006378 3.9e-80 302.0 220 70.5
Sabra02G0182500 Salix brachista HOM05D005229 ORTHO05D006378 5.0e-80 301.6 224 72.8
ClCG11G010740 Citrullus lanatus HOM05D005229 ORTHO05D006378 6.6e-80 301.2 224 72.3
Ciclev10016637m.g Citrus clementina HOM05D005229 ORTHO05D006378 6.6e-80 301.2 224 72.8
MELO3C008731.2 Cucumis melo HOM05D005229 ORTHO05D006378 6.6e-80 301.2 224 72.3
Gohir.A07G089500 Gossypium hirsutum HOM05D005229 ORTHO05D006378 6.6e-80 301.2 223 72.2
Gohir.D07G094300 Gossypium hirsutum HOM05D005229 ORTHO05D006378 6.6e-80 301.2 224 72.3
Manes.12G055600 Manihot esculenta HOM05D005229 ORTHO05D006378 6.6e-80 301.2 199 75.9
Sed0023204 Sechium edule HOM05D005229 ORTHO05D006378 6.6e-80 301.2 224 71.9
Potri.014G175600 Populus trichocarpa HOM05D005229 ORTHO05D006378 8.6e-80 300.8 224 71.9
Psat3g138440 Pisum sativum HOM05D005229 ORTHO05D006378 1.1e-79 300.4 219 69.4
Atru.chr6.3527 Acer truncatum HOM05D005229 ORTHO05D006378 1.9e-79 299.7 226 71.2
Aa31LG9G5690 Aethionema arabicum HOM05D005229 ORTHO05D006378 1.9e-79 299.7 226 68.6
C08p09050 Brassica napus HOM05D005229 ORTHO05D006378 1.9e-79 299.7 226 69.5
Thecc.01G207800 Theobroma cacao HOM05D005229 ORTHO05D006378 1.9e-79 299.7 224 72.3
BcaC07g37428 Brassica carinata HOM05D005229 ORTHO05D006378 2.5e-79 299.3 226 69.0
CsaV3_2G009680 Cucumis sativus L. HOM05D005229 ORTHO05D006378 2.5e-79 299.3 224 71.4
Gohir.A07G160500 Gossypium hirsutum HOM05D005229 ORTHO05D006378 2.5e-79 299.3 224 71.9
Gohir.D07G168100 Gossypium hirsutum HOM05D005229 ORTHO05D006378 2.5e-79 299.3 224 71.9
Lsat_1_v5_gn_9_16861 Lactuca sativa HOM05D005229 ORTHO05D006378 3.3e-79 298.9 200 75.0
Sabra14G0134400 Salix brachista HOM05D005229 ORTHO05D006378 3.3e-79 298.9 224 71.9
AT4G12800 Arabidopsis thaliana HOM05D005229 ORTHO05D006378 4.3e-79 298.5 226 68.6
A08p07360 Brassica napus HOM05D005229 ORTHO05D006378 4.3e-79 298.5 226 69.0
BraA08t32752Z Brassica rapa HOM05D005229 ORTHO05D006378 4.3e-79 298.5 226 69.0
BolC8t47751H Brassica oleracea HOM05D005229 ORTHO05D006378 7.3e-79 297.7 226 69.0
COL.COLO4_07353 Corchorus olitorius HOM05D005229 ORTHO05D006378 7.3e-79 297.7 224 70.5
Gorai.N002100 Gossypium raimondii HOM05D005229 ORTHO05D006378 9.5e-79 297.4 223 71.7
Eucgr.K02362 Eucalyptus grandis HOM05D005229 ORTHO05D006378 1.2e-78 297.0 238 68.9
Sopen06g034340 Solanum pennellii HOM05D005229 ORTHO05D006378 1.2e-78 297.0 224 71.4
PGSC0003DMG400027671 Solanum tuberosum HOM05D005229 ORTHO05D006378 1.2e-78 297.0 224 71.4
BcaB03g16154 Brassica carinata HOM05D005229 ORTHO05D006378 1.6e-78 296.6 226 69.0
Carub.0007s3001 Capsella rubella HOM05D005229 ORTHO05D006378 1.6e-78 296.6 226 68.6
Os12g0420400 Oryza sativa ssp. japonica HOM05D005229 ORTHO05D006378 1.6e-78 296.6 201 75.6
PGSC0003DMG400027672 Solanum tuberosum HOM05D005229 ORTHO05D006378 1.6e-78 296.6 224 71.4
Sed0003052 Sechium edule HOM05D005229 ORTHO05D006378 2.1e-78 296.2 224 69.6
Solyc06g082950.4 Solanum lycopersicum HOM05D005229 ORTHO05D006378 2.8e-78 295.8 227 69.2
BcaB04g17739 Brassica carinata HOM05D005229 ORTHO05D006378 6.2e-78 294.7 226 69.0
Solyc06g082940.3 Solanum lycopersicum HOM05D005229 ORTHO05D006378 6.2e-78 294.7 227 69.2
Sopen06g034330 Solanum pennellii HOM05D005229 ORTHO05D006378 6.2e-78 294.7 224 70.5
Ah.04g158950 Amaranthus hybridus HOM05D005229 ORTHO05D006378 8.0e-78 294.3 222 69.4
Aqoxy2G04070 Aquilegia oxysepala HOM05D005229 ORTHO05D006378 3.1e-77 292.4 224 68.3
Mapoly0102s0025 Marchantia polymorpha HOM05D005229 ORTHO05D006378 3.1e-77 292.4 192 75.5
PGR044G1943 Punica granatum HOM05D005229 ORTHO05D006378 4.0e-77 292.0 227 70.9
Zm00001eb123000 Zea mays HOM05D005229 ORTHO05D006378 4.0e-77 292.0 201 74.6
Lj1P104T52 Lonicera japonica HOM05D005229 ORTHO05D006378 8.9e-77 290.8 162 84.6
Duzib138G0242 Durio zibethinus HOM05D005229 ORTHO05D006378 3.4e-76 288.9 224 70.1
PSO017G0175 Papaver somniferum HOM05D005229 ORTHO05D006378 2.2e-75 286.2 226 68.1
PSO675G2116 Papaver somniferum HOM05D005229 ORTHO05D006378 2.2e-75 286.2 226 68.1
Zm00001eb336580 Zea mays HOM05D005229 ORTHO05D006378 1.9e-74 283.1 162 81.5
Pp3c5_4200 Physcomitrium patens HOM05D005229 ORTHO05D006378 1.2e-73 280.4 223 66.8
Pp3c16_5670 Physcomitrium patens HOM05D005229 ORTHO05D006378 3.0e-72 275.8 164 80.5
Pp3c27_2310 Physcomitrium patens HOM05D005229 ORTHO05D006378 6.6e-72 274.6 227 65.6
AagrBONN_evm.TU.Sc2ySwM_362.2854 Anthoceros agrestis HOM05D005229 ORTHO05D006378 2.5e-71 272.7 179 74.9
CDE06G0966 Ceratophyllum demersum HOM05D005229 ORTHO05D006378 1.4e-69 266.9 199 71.9
Nitab4.5_0001348g0130 Nicotiana tabacum HOM05D005229 ORTHO05D006378 9.2e-66 254.2 162 77.2
CBR_g27900 Chara braunii HOM05D005229 ORTHO05D006378 8.6e-64 247.7 224 58.9
Dinv28794 Davidia involucrata HOM05D005229 ORTHO05D006378 1.1e-50 204.1 223 57.0
MCO13G042 Micromonas commoda HOM05D005229 ORTHO05D006378 5.6e-47 191.8 161 59.6
Cre12.g486300 Chlamydomonas reinhardtii HOM05D005229 ORTHO05D006378 9.6e-47 191.0 168 59.5
Nitab4.5_0001348g0080 Nicotiana tabacum HOM05D005229 ORTHO05D006378 2.1e-46 189.9 222 52.7
PRCOL_00002830 Prasinoderma coloniale HOM05D005229 ORTHO05D006378 3.1e-45 186.0 150 60.7
Hma1.2p1_0171F.1_g075540 Hydrangea macrophylla HOM05D005229 ORTHO05D006378 9.3e-42 174.5 127 68.5
Peaxi162Scf01242g00025 Petunia axillaris HOM05D005229 ORTHO05D006378 2.3e-40 169.9 226 49.1
Actinidia23801 Actinidia chinensis HOM05D005229 ORTHO05D006378 4.9e-35 152.1 144 59.7
MD04G1204600 Malus domestica HOM05D000208 ORTHO05D000130 3.0e-16 89.7 88 59.1
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 5.3e-13 79.0 56 66.1
Actinidia12853 Actinidia chinensis HOM05D001772 ORTHO05D000476 5.3e-13 79.0 56 66.1


User provided reference genes

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