Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1145G095 Amborella trichopoda HOM05D000510 ORTHO05D031064 8.4e-54 213.4 105 100.0
ATR0824G045 Amborella trichopoda HOM05D000510 ORTHO05D006942 7.5e-26 120.6 149 50.3
ATR0559G088 Amborella trichopoda HOM05D000510 ORTHO05D031064 3.1e-24 115.2 149 49.0
ATR0661G548 Amborella trichopoda HOM05D000510 ORTHO05D031064 2.9e-14 82.0 133 43.6
MBI08_g14949_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D006942 4.2e-13 78.2 159 31.4
Nn1g09631 Nelumbo nucifera HOM05D000510 ORTHO05D006942 1.4e-11 73.2 156 31.4
Os03g0637800 Oryza sativa ssp. japonica HOM05D000510 ORTHO05D006942 3.0e-11 72.0 156 31.4
MBI11_g04862_MAGBIO Magnolia biondii HOM05D000510 ORTHO05D006942 6.8e-11 70.9 157 30.6
Cfa015170 Carpinus fangiana HOM05D000510 ORTHO05D006942 2.6e-10 68.9 165 29.7
Aqoxy2G04122 Aquilegia oxysepala HOM05D000510 ORTHO05D006942 3.4e-10 68.6 160 29.4
PSO017G6430 Papaver somniferum HOM05D000510 ORTHO05D006942 4.4e-10 68.2 157 29.9
PSO675G3025 Papaver somniferum HOM05D000510 ORTHO05D006942 4.4e-10 68.2 157 29.9
Haze_01505 Corylus avellana HOM05D000510 ORTHO05D006942 7.5e-10 67.4 165 29.1
EL10Ac3g05942 Beta vulgaris HOM05D000510 ORTHO05D006942 9.8e-10 67.0 157 29.9
Sc13g0006770 Simmondsia chinensis HOM05D000510 ORTHO05D006942 1.3e-09 66.6 157 28.7
PGR083G2844 Punica granatum HOM05D000510 ORTHO05D006942 2.2e-09 65.9 159 30.2
GSVIVG01010759001 Vitis vinifera HOM05D000510 ORTHO05D006942 2.2e-09 65.9 159 28.3
Zm00001eb406780 Zea mays HOM05D000510 ORTHO05D006942 6.3e-09 64.3 156 28.8
Actinidia11302 Actinidia chinensis HOM05D000510 ORTHO05D006942 1.1e-08 63.5 159 27.7
TAR362G0688 Trochodendron aralioides HOM05D000510 ORTHO05D006942 1.1e-08 63.5 158 27.8
Cpa.g.sc9.282 Carica papaya HOM05D000510 ORTHO05D006942 1.4e-08 63.2 165 27.9
Actinidia39849 Actinidia chinensis HOM05D000510 ORTHO05D006942 1.8e-08 62.8 159 28.3
Rhsim02G0077100 Rhododendron simsii HOM05D000510 ORTHO05D006942 1.8e-08 62.8 158 28.5
ECA240G0569 Erigeron canadensis HOM05D000510 ORTHO05D006942 2.4e-08 62.4 160 26.9
QL10p048845 Quercus lobata HOM05D000510 ORTHO05D006942 4.1e-08 61.6 163 27.6
COL.COLO4_07666 Corchorus olitorius HOM05D000510 ORTHO05D006942 5.4e-08 61.2 167 26.3
Duzib151G0818 Durio zibethinus HOM05D000510 ORTHO05D006942 5.4e-08 61.2 165 27.3
MD04G1040500 Malus domestica HOM05D000510 ORTHO05D006942 5.4e-08 61.2 165 27.9
TAR633G2069 Trochodendron aralioides HOM05D000510 ORTHO05D006942 5.4e-08 61.2 158 28.5
Thecc.04G179600 Theobroma cacao HOM05D000510 ORTHO05D006942 7.0e-08 60.8 165 27.3
ClCG07G015670 Citrullus lanatus HOM05D000510 ORTHO05D006942 1.2e-07 60.1 158 29.1
HanXRQChr03g0091111 Helianthus annuus HOM05D000510 ORTHO05D006942 1.2e-07 60.1 160 25.6
Sed0016530 Sechium edule HOM05D000510 ORTHO05D006942 1.6e-07 59.7 158 28.5
AUR62015382 Chenopodium quinoa HOM05D000510 ORTHO05D006942 2.0e-07 59.3 157 27.4
Gohir.D10G129101 Gossypium hirsutum HOM05D000510 ORTHO05D006942 2.0e-07 59.3 167 26.3
Gorai.011G142500 Gossypium raimondii HOM05D000510 ORTHO05D006942 2.0e-07 59.3 167 26.3
Lj6C53G4 Lonicera japonica HOM05D000510 ORTHO05D006942 2.7e-07 58.9 160 26.9
CsaV3_4G003440 Cucumis sativus L. HOM05D000510 ORTHO05D006942 3.5e-07 58.5 158 28.5
Ah.15g099620 Amaranthus hybridus HOM05D000510 ORTHO05D006942 4.5e-07 58.2 157 27.4
MELO3C017714.2 Cucumis melo HOM05D000510 ORTHO05D006942 4.5e-07 58.2 158 28.5
Medtr2g098910 Medicago truncatula HOM05D000510 ORTHO05D006942 4.5e-07 58.2 160 26.2
Psat5g289200 Pisum sativum HOM05D000510 ORTHO05D006942 4.5e-07 58.2 160 26.2
CiPaw.01G100000 Carya illinoinensis HOM05D000510 ORTHO05D006942 5.9e-07 57.8 165 26.7
Cc03_g12920 Coffea canephora HOM05D000510 ORTHO05D006942 5.9e-07 57.8 157 26.8
Migut.B00097 Erythranthe guttata HOM05D000510 ORTHO05D006942 5.9e-07 57.8 161 24.2
Gohir.A10G137500 Gossypium hirsutum HOM05D000510 ORTHO05D006942 5.9e-07 57.8 167 25.7
Nitab4.5_0002474g0030 Nicotiana tabacum HOM05D000510 ORTHO05D006942 5.9e-07 57.8 155 25.8
Oeu055655.1 Olea europaea HOM05D000510 ORTHO05D006942 5.9e-07 57.8 160 25.6
Potri.007G128400 Populus trichocarpa HOM05D000510 ORTHO05D006942 5.9e-07 57.8 161 26.7
Atru.chr3.1485 Acer truncatum HOM05D000510 ORTHO05D006942 7.7e-07 57.4 158 27.8
Duzib268G1091 Durio zibethinus HOM05D000510 ORTHO05D006942 7.7e-07 57.4 165 24.8
Manes.11G120900 Manihot esculenta HOM05D000510 ORTHO05D006942 7.7e-07 57.4 157 27.4
CSS0036325 Camellia sinensis var. sinensis HOM05D000510 ORTHO05D006942 1.0e-06 57.0 165 27.9
AUR62002308 Chenopodium quinoa HOM05D000510 ORTHO05D006942 1.0e-06 57.0 157 26.8
Ciclev10018759m.g Citrus clementina HOM05D000510 ORTHO05D006942 1.0e-06 57.0 158 27.2
Glyma.11G127700 Glycine max HOM05D000510 ORTHO05D006942 1.0e-06 57.0 158 27.8
Prupe.1G194300 Prunus persica HOM05D000510 ORTHO05D006942 1.0e-06 57.0 157 28.7
SHI26082 Sapria himalayana HOM05D000510 ORTHO05D006942 1.0e-06 57.0 165 26.1
TPR.G18847 Trifolium pratense HOM05D000510 ORTHO05D006942 1.0e-06 57.0 160 26.2
HPP92_023712 Vanilla planifolia HOM05D000510 ORTHO05D006942 1.0e-06 57.0 91 38.5
Eucgr.A00082 Eucalyptus grandis HOM05D000510 ORTHO05D006942 1.3e-06 56.6 161 24.8
FAN07G1914 Fragaria x ananassa HOM05D000510 ORTHO05D006942 1.3e-06 56.6 165 27.3
Nitab4.5_0004047g0060 Nicotiana tabacum HOM05D000510 ORTHO05D006942 1.3e-06 56.6 155 25.8
Oeu012284.1 Olea europaea HOM05D000510 ORTHO05D006942 1.3e-06 56.6 166 24.7
Phvul.011G054300 Phaseolus vulgaris HOM05D000510 ORTHO05D006942 1.3e-06 56.6 158 27.2
FvH4_4g10810 Fragaria vesca HOM05D000510 ORTHO05D006942 1.7e-06 56.2 165 26.7
FAN12G3624 Fragaria x ananassa HOM05D000510 ORTHO05D006942 1.7e-06 56.2 165 26.7
SGA_v2.0_scaffold58G20401 Striga asiatica HOM05D000510 ORTHO05D006942 1.7e-06 56.2 170 22.4
VMungo1127G0022 Vigna mungo HOM05D000510 ORTHO05D006942 1.7e-06 56.2 158 27.2
CANSAT78G1007 Cannabis sativa HOM05D000510 ORTHO05D006942 2.3e-06 55.8 159 25.8
Ca_20788_v3 Cicer arietinum L. HOM05D000510 ORTHO05D006942 2.3e-06 55.8 159 26.4
Glyma.12G052300 Glycine max HOM05D000510 ORTHO05D006942 2.3e-06 55.8 158 27.2
TPR.G34184 Trifolium pratense HOM05D000510 ORTHO05D006942 2.3e-06 55.8 158 25.9
FAN17G2837 Fragaria x ananassa HOM05D000510 ORTHO05D006942 2.9e-06 55.5 165 26.7
Sed0007298 Sechium edule HOM05D000510 ORTHO05D006942 2.9e-06 55.5 158 27.8
RcHm_v2.0_Chr4g0406691 Rosa chinensis HOM05D000510 ORTHO05D006942 3.8e-06 55.1 165 26.1
CAN.G451.1 Capsicum annuum HOM05D000510 ORTHO05D006942 5.0e-06 54.7 159 25.2
Lsat_1_v5_gn_3_115521 Lactuca sativa HOM05D000510 ORTHO05D006942 5.0e-06 54.7 82 39.0
Lj3g0024373 Lotus japonicus HOM05D000510 ORTHO05D006942 5.0e-06 54.7 160 24.4
Peaxi162Scf00126g00012 Petunia axillaris HOM05D000510 ORTHO05D006942 5.0e-06 54.7 158 24.1
Sabra17G0019300 Salix brachista HOM05D000510 ORTHO05D006942 5.0e-06 54.7 161 26.1
PGSC0003DMG400006667 Solanum tuberosum HOM05D000510 ORTHO05D006942 5.0e-06 54.7 156 24.4
Potri.017G029900 Populus trichocarpa HOM05D000510 ORTHO05D006942 6.6e-06 54.3 161 24.8
Sopen11g020450 Solanum pennellii HOM05D000510 ORTHO05D006942 8.6e-06 53.9 156 24.4


User provided reference genes

Program Settings