Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 0.0e+00 1379.8 687 100.0
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 0.0e+00 1312.0 687 95.9
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 1.8e-184 650.2 734 54.5
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 2.3e-184 649.8 705 55.7
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 7.4e-183 644.8 714 56.2
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 9.7e-183 644.4 599 62.6
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 4.8e-182 642.1 732 55.6
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 1.2e-180 637.5 664 58.4
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 7.7e-180 634.8 693 56.1
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 5.0e-179 632.1 714 55.2
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.1e-178 630.9 707 55.6
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 4.2e-178 629.0 725 54.3
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 4.2e-178 629.0 667 57.4
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 1.2e-177 627.5 734 53.8
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 1.2e-177 627.5 731 55.5
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 2.1e-177 626.7 705 55.7
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 4.7e-177 625.5 723 53.4
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 5.2e-176 622.1 733 54.6
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 5.2e-176 622.1 722 53.6
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 1.1e-175 620.9 714 54.8
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 1.1e-175 620.9 720 54.0
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 1.3e-174 617.5 727 53.9
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 2.2e-174 616.7 707 54.7
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 2.2e-174 616.7 617 59.3
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 3.7e-174 615.9 724 53.2
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 4.8e-174 615.5 730 53.4
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 4.8e-174 615.5 649 55.9
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 6.3e-174 615.1 715 53.8
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 6.3e-174 615.1 732 53.6
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 1.1e-173 614.4 727 51.7
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 5.3e-173 612.1 607 58.0
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 9.1e-173 611.3 599 59.4
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 2.0e-172 610.1 737 52.8
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 1.7e-171 607.1 716 52.8
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 2.9e-171 606.3 738 52.0
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 1.1e-170 604.4 724 52.5
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 1.5e-170 604.0 727 52.8
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 2.5e-170 603.2 730 52.3
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 2.5e-170 603.2 702 54.7
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 3.2e-170 602.8 732 51.4
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 1.6e-169 600.5 708 53.1
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 2.7e-169 599.7 722 53.0
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 4.0e-168 595.9 729 51.4
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 4.0e-168 595.9 722 53.0
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 6.8e-168 595.1 739 51.6
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 2.6e-167 593.2 715 52.7
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 4.4e-167 592.4 712 52.7
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 5.7e-167 592.0 718 51.9
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 9.8e-167 591.3 713 52.9
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 1.3e-166 590.9 723 52.6
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 2.2e-166 590.1 713 52.5
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 4.8e-166 589.0 717 52.7
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 4.8e-166 589.0 693 52.7
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 6.3e-166 588.6 707 51.9
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 8.3e-166 588.2 729 51.6
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 3.1e-165 586.3 721 52.1
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 3.1e-165 586.3 729 51.3
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 9.1e-165 584.7 707 52.9
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 9.1e-165 584.7 717 52.6
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 1.2e-164 584.3 719 52.3
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 1.6e-164 583.9 706 53.1
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 4.5e-164 582.4 729 51.7
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 7.7e-164 581.6 709 51.9
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 1.1e-162 577.8 721 52.8
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 1.1e-162 577.8 705 52.9
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 1.1e-162 577.8 730 50.3
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 1.9e-162 577.0 663 54.4
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 2.5e-162 576.6 712 52.2
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 2.5e-162 576.6 730 50.0
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 3.2e-162 576.2 703 52.5
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 1.2e-161 574.3 720 52.1
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 6.1e-161 572.0 719 51.0
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 2.3e-160 570.1 576 57.5
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 4.0e-160 569.3 727 50.5
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 2.0e-159 567.0 705 52.6
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 3.4e-159 566.2 728 51.0
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 5.7e-159 565.5 728 50.4
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 9.8e-159 564.7 606 57.3
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 1.7e-158 563.9 707 53.0
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 3.1e-157 559.7 722 51.5
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 7.0e-157 558.5 584 56.0
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 9.1e-157 558.1 584 55.8
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 1.0e-155 554.7 715 50.1
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 2.3e-155 553.5 649 54.2
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 2.9e-155 553.1 745 49.5
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 5.0e-155 552.4 718 50.8
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 8.6e-155 551.6 727 50.9
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 4.2e-154 549.3 710 51.4
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 1.6e-153 547.4 709 49.4
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 1.6e-153 547.4 584 54.5
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 1.8e-152 543.9 575 54.6
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 4.0e-152 542.7 709 49.2
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 2.2e-150 537.0 649 51.3
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 1.4e-149 534.3 595 54.5
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 1.4e-149 534.3 580 54.1
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 9.2e-149 531.6 719 50.1
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 1.6e-148 530.8 720 47.5
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 2.7e-148 530.0 723 48.5
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 1.0e-147 528.1 702 48.6
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 4.7e-145 519.2 550 56.4
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 3.5e-140 503.1 667 51.3
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 2.6e-135 486.9 581 51.8
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 5.8e-135 485.7 547 52.8
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 5.8e-135 485.7 658 48.5
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 2.4e-133 480.3 550 52.2
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 2.4e-133 480.3 623 49.1
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 3.5e-132 476.5 576 50.5
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 8.6e-123 445.3 504 54.6
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 6.2e-121 439.1 310 75.8
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 7.9e-108 395.6 669 41.6
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 1.0e-107 395.2 597 45.6
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 1.2e-103 381.7 464 53.2
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 5.8e-103 379.4 409 54.3
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 2.4e-101 374.0 370 60.5
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 3.0e-91 340.5 836 34.6
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 3.9e-91 340.1 902 33.6
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 9.6e-90 335.5 347 59.1
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 2.1e-89 334.3 373 53.4
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 4.5e-87 326.6 342 57.0
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 3.9e-83 313.5 341 54.5
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 3.9e-75 287.0 286 58.0
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 6.9e-72 276.2 348 51.1
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 1.5e-71 275.0 390 46.7
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 8.8e-67 259.2 360 49.4
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 3.2e-61 240.7 418 40.9
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 2.6e-58 231.1 289 52.2
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 8.0e-52 209.5 314 44.3
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 7.5e-50 203.0 144 77.1
SHI01951 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-49 199.9 233 52.8
CDE06G0583 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 3.5e-39 167.5 187 45.5
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 5.0e-38 163.7 209 50.7
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.7e-33 148.7 130 63.1
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 9.2e-32 142.9 120 62.5
Cre04.g222300 Chlamydomonas reinhardtii HOM05D005511 ORTHO05D006616 2.7e-31 141.4 422 28.9
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 6.4e-25 120.2 138 52.9
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 3.9e-22 110.9 146 47.9
PGSC0003DMG400027627 Solanum tuberosum HOM05D005511 ORTHO05D006616 1.7e-09 68.9 72 54.2
TAR371G0581 Trochodendron aralioides HOM05D000874 ORTHO05D003941 6.0e-07 60.5 68 44.1
TAR629G2997 Trochodendron aralioides HOM05D000874 ORTHO05D001267 1.0e-06 59.7 67 44.8
PRCOL_00003186 Prasinoderma coloniale HOM05D000032 ORTHO05D006970 1.3e-06 59.3 41 63.4
PRCOL_00003511 Prasinoderma coloniale HOM05D005511 ORTHO05D006616 1.3e-06 59.3 60 43.3
Lj5P134T60 Lonicera japonica HOM05D000874 ORTHO05D001267 2.3e-06 58.5 68 42.6
AUR62021535 Chenopodium quinoa HOM05D000874 ORTHO05D001267 3.0e-06 58.2 68 44.1
MD06G1209200 Malus domestica HOM05D000251 ORTHO05D007889 3.9e-06 57.8 64 46.9
EL10Ac5g11157 Beta vulgaris HOM05D000874 ORTHO05D001267 5.1e-06 57.4 68 44.1
AUR62036928 Chenopodium quinoa HOM05D000251 ORTHO05D007889 5.1e-06 57.4 93 39.8
ECA246G3190 Erigeron canadensis HOM05D000874 ORTHO05D001267 5.1e-06 57.4 70 44.3
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 5.1e-06 57.4 76 44.7
SEGI_24030 Sequoiadendron giganteum HOM05D000874 ORTHO05D001267 5.1e-06 57.4 82 43.9
ATR0177G003 Amborella trichopoda HOM05D000874 ORTHO05D001267 6.6e-06 57.0 66 43.9
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 6.6e-06 57.0 63 46.0
GSVIVG01008206001 Vitis vinifera HOM05D000251 ORTHO05D007889 6.6e-06 57.0 67 44.8
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 8.6e-06 56.6 64 45.3
Pp3c12_4860 Physcomitrium patens HOM05D000874 ORTHO05D001267 8.6e-06 56.6 89 38.2


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