Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 3.7e-117 424.9 210 100.0
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 4.1e-76 288.5 286 58.0
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.6e-72 276.6 285 56.5
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 5.8e-70 268.1 228 64.5
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 9.6e-49 197.6 202 57.4
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 1.3e-45 187.2 270 44.4
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 2.9e-45 186.0 256 47.3
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 3.8e-45 185.7 269 43.5
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 8.4e-45 184.5 261 44.4
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 8.4e-45 184.5 269 43.5
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 1.4e-44 183.7 257 43.6
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 2.4e-44 183.0 276 43.1
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 3.2e-44 182.6 260 45.4
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 5.4e-44 181.8 269 42.0
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 1.6e-43 180.3 266 43.6
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 2.1e-43 179.9 268 42.9
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 2.1e-43 179.9 279 41.6
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 2.7e-43 179.5 243 46.1
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 2.7e-43 179.5 181 53.6
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 2.7e-43 179.5 268 44.8
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 3.5e-43 179.1 276 42.8
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 4.6e-43 178.7 241 44.4
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 4.6e-43 178.7 275 41.5
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 1.3e-42 177.2 266 42.5
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 1.8e-42 176.8 279 41.9
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 1.8e-42 176.8 269 40.9
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 1.8e-42 176.8 269 40.9
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 2.3e-42 176.4 264 41.3
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 3.0e-42 176.0 272 42.3
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 3.9e-42 175.6 244 44.3
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 5.1e-42 175.3 243 45.3
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 5.1e-42 175.3 276 42.0
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 6.7e-42 174.9 275 42.2
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 8.7e-42 174.5 246 43.5
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 8.7e-42 174.5 240 45.0
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 8.7e-42 174.5 276 42.0
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 8.7e-42 174.5 242 45.0
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 1.1e-41 174.1 281 40.6
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 1.9e-41 173.3 273 41.8
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 2.5e-41 172.9 255 43.1
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 3.3e-41 172.6 290 39.7
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 3.3e-41 172.6 251 45.4
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 4.3e-41 172.2 267 40.8
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 4.3e-41 172.2 274 42.3
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 5.6e-41 171.8 241 44.0
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 5.6e-41 171.8 273 42.9
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 7.4e-41 171.4 289 39.8
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 7.4e-41 171.4 241 45.6
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 9.6e-41 171.0 241 44.0
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 9.6e-41 171.0 241 44.0
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 9.6e-41 171.0 241 44.4
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 1.6e-40 170.2 269 39.8
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 1.6e-40 170.2 268 39.9
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 2.1e-40 169.9 271 42.1
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 2.8e-40 169.5 271 40.6
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 3.7e-40 169.1 270 41.5
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 6.2e-40 168.3 243 44.0
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 6.2e-40 168.3 274 42.3
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 1.4e-39 167.2 269 42.4
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 1.4e-39 167.2 270 40.7
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 1.4e-39 167.2 269 41.3
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 1.8e-39 166.8 274 42.3
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 3.1e-39 166.0 268 42.5
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 4.0e-39 165.6 268 39.9
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 6.9e-39 164.9 276 39.9
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 9.0e-39 164.5 277 40.1
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 9.0e-39 164.5 267 38.6
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 9.0e-39 164.5 288 39.9
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 1.2e-38 164.1 266 40.2
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 1.5e-38 163.7 277 38.6
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 2.6e-38 162.9 267 39.3
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 3.4e-38 162.5 255 40.4
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 4.5e-38 162.2 271 39.9
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 4.5e-38 162.2 269 41.3
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 4.5e-38 162.2 268 39.2
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 5.8e-38 161.8 265 41.9
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 5.8e-38 161.8 246 44.3
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 7.6e-38 161.4 271 39.9
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 7.6e-38 161.4 276 37.3
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 1.0e-37 161.0 271 39.9
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 1.0e-37 161.0 278 40.3
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 2.2e-37 159.8 268 39.9
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 2.9e-37 159.5 269 38.3
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 4.9e-37 158.7 278 38.5
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 6.5e-37 158.3 248 41.5
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 1.4e-36 157.1 278 38.5
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 2.5e-36 156.4 277 39.0
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 3.2e-36 156.0 244 43.0
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 4.2e-36 155.6 277 39.0
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 7.1e-36 154.8 268 38.4
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 1.2e-35 154.1 274 38.3
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 1.2e-35 154.1 278 38.8
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 2.1e-35 153.3 272 39.7
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 3.5e-35 152.5 274 39.4
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 7.9e-35 151.4 263 38.0
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 1.0e-34 151.0 271 37.3
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 1.3e-34 150.6 278 37.1
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 1.3e-34 150.6 263 38.0
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 2.3e-34 149.8 228 44.3
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 3.9e-34 149.1 281 37.4
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 5.1e-34 148.7 268 36.6
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 5.1e-34 148.7 275 37.8
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 1.1e-33 147.5 268 36.2
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 1.5e-33 147.1 268 36.2
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 1.9e-33 146.7 278 36.7
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 4.3e-33 145.6 272 37.1
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 1.3e-32 144.1 267 37.5
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 2.8e-32 142.9 268 35.1
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 8.2e-32 141.4 260 39.2
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 1.1e-31 141.0 266 37.2
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 1.8e-31 140.2 211 42.7
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 2.6e-30 136.3 222 38.7
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 3.4e-30 136.0 280 36.1
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 2.2e-29 133.3 237 39.7
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 6.5e-29 131.7 223 40.8
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 1.4e-28 130.6 293 34.1
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 5.5e-28 128.6 266 35.0
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 2.1e-27 126.7 223 38.6
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 1.5e-25 120.6 223 38.1
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 2.2e-24 116.7 218 37.6
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 3.4e-22 109.4 97 61.9
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.2e-19 100.9 87 62.1
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 6.1e-19 98.6 141 44.7
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 7.9e-19 98.2 97 55.7
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 4.1e-15 85.9 68 61.8
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 2.6e-14 83.2 124 42.7
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 2.2e-13 80.1 107 43.0
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 1.2e-11 74.3 119 39.5
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 2.7e-11 73.2 102 45.1


User provided reference genes

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