Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1145G006 Amborella trichopoda HOM05D006237 ORTHO05D002967 5.1e-94 347.8 185 100.0
ATR0680G220 Amborella trichopoda HOM05D006237 ORTHO05D002967 3.1e-75 285.4 217 74.7
MBI16_g19591_MAGBIO Magnolia biondii HOM05D006237 ORTHO05D002967 3.9e-46 188.7 193 57.5
TAR636G1281 Trochodendron aralioides HOM05D002456 ORTHO05D002967 2.5e-40 169.5 162 60.5
Nn1g09125 Nelumbo nucifera HOM05D006237 ORTHO05D002967 6.1e-39 164.9 181 56.9
Actinidia34142 Actinidia chinensis HOM05D006237 ORTHO05D002967 2.4e-35 152.9 166 58.4
TAR629G2491 Trochodendron aralioides HOM05D006237 ORTHO05D002967 9.1e-35 151.0 184 52.7
TWI56G0599 Tripterygium wilfordii HOM05D006237 ORTHO05D002967 1.5e-34 150.2 189 54.0
Peaxi162Scf00078g00351 Petunia axillaris HOM05D006237 ORTHO05D002967 7.7e-34 147.9 203 51.2
TWI12G0168 Tripterygium wilfordii HOM05D006237 ORTHO05D002967 1.1e-32 144.1 189 51.9
Cpa.g.sc1.394 Carica papaya HOM05D006237 ORTHO05D002967 1.9e-32 143.3 170 51.8
HPP92_005582 Vanilla planifolia HOM05D006237 ORTHO05D002967 3.2e-32 142.5 169 52.1
HPP92_005592 Vanilla planifolia HOM05D006237 ORTHO05D002967 3.2e-32 142.5 169 52.1
CSS0013329 Camellia sinensis var. sinensis HOM05D006237 ORTHO05D002967 4.2e-32 142.1 172 52.9
Aqoxy7G01479 Aquilegia oxysepala HOM05D006237 ORTHO05D002967 7.2e-32 141.4 196 49.5
Nitab4.5_0006974g0010 Nicotiana tabacum HOM05D006237 ORTHO05D002967 7.2e-32 141.4 188 48.9
Nitab4.5_0005550g0040 Nicotiana tabacum HOM05D006237 ORTHO05D002967 9.4e-32 141.0 189 49.2
FvH4_6g32580 Fragaria vesca HOM05D006237 ORTHO05D002967 1.2e-31 140.6 159 56.6
FAN14G2466 Fragaria x ananassa HOM05D006237 ORTHO05D002967 2.7e-31 139.4 157 56.1
Manes.14G023800 Manihot esculenta HOM05D006237 ORTHO05D002967 2.7e-31 139.4 165 53.3
CANSAT54G1461 Cannabis sativa HOM05D006237 ORTHO05D002967 4.7e-31 138.7 166 53.0
Prupe.3G056900 Prunus persica HOM05D006237 ORTHO05D002967 6.1e-31 138.3 194 47.9
MSTRG.27097 Avicennia marina HOM05D006237 ORTHO05D002967 1.4e-30 137.1 185 49.7
PGR142G0430 Punica granatum HOM05D006237 ORTHO05D002967 1.4e-30 137.1 180 51.1
FAN05G1350 Fragaria x ananassa HOM05D006237 ORTHO05D002967 5.2e-30 135.2 153 55.6
FAN05G1909 Fragaria x ananassa HOM05D006237 ORTHO05D002967 5.2e-30 135.2 153 55.6
Haze_00028 Corylus avellana HOM05D006237 ORTHO05D002967 6.7e-30 134.8 156 51.3
Cfa016275 Carpinus fangiana HOM05D006237 ORTHO05D002967 8.8e-30 134.4 182 48.4
Lsat_1_v5_gn_4_66521 Lactuca sativa HOM05D006237 ORTHO05D002967 1.5e-29 133.7 203 48.3
Sc20g0002110 Simmondsia chinensis HOM05D006237 ORTHO05D002967 1.5e-29 133.7 156 50.6
FAN02G0617 Fragaria x ananassa HOM05D006237 ORTHO05D002967 2.0e-29 133.3 153 54.2
Sopen10g030770 Solanum pennellii HOM05D006237 ORTHO05D002967 2.0e-29 133.3 142 57.7
MD15G1412900 Malus domestica HOM05D006237 ORTHO05D002967 2.6e-29 132.9 190 45.3
Potri.012G144700 Populus trichocarpa HOM05D006237 ORTHO05D002967 3.3e-29 132.5 193 46.6
DCAR_027497 Daucus carota HOM05D006237 ORTHO05D002967 5.7e-29 131.7 154 51.3
RcHm_v2.0_Chr2g0141031 Rosa chinensis HOM05D006237 ORTHO05D002967 1.3e-28 130.6 192 49.0
Duzib128G1632 Durio zibethinus HOM05D006237 ORTHO05D002967 2.2e-28 129.8 159 52.2
CiPaw.15G152100 Carya illinoinensis HOM05D006237 ORTHO05D002967 4.8e-28 128.6 154 52.6
Solyc10g080160.2 Solanum lycopersicum HOM05D006237 ORTHO05D002967 6.3e-28 128.3 139 56.8
MD09G1200300 Malus domestica HOM05D006237 ORTHO05D002967 1.1e-27 127.5 190 44.7
GSVIVG01036122001 Vitis vinifera HOM05D006237 ORTHO05D002967 1.1e-27 127.5 146 56.2
Eucgr.K00287 Eucalyptus grandis HOM05D006237 ORTHO05D002967 1.4e-27 127.1 189 46.6
PGSC0003DMG400023687 Solanum tuberosum HOM05D006237 ORTHO05D002967 1.4e-27 127.1 139 56.8
Sed0010472 Sechium edule HOM05D006237 ORTHO05D002967 1.8e-27 126.7 167 50.3
arahy.Tifrunner.gnm1.ann1.B3F3VS Arachis hypogaea HOM05D006237 ORTHO05D002967 2.4e-27 126.3 202 47.5
Cc02_g29180 Coffea canephora HOM05D006237 ORTHO05D002967 2.4e-27 126.3 117 62.4
unitig_0.g1076 Utricularia gibba HOM05D006237 ORTHO05D002967 4.1e-27 125.6 169 49.1
SGA_v2.0_scaffold44G16742 Striga asiatica HOM05D006237 ORTHO05D002967 7.0e-27 124.8 149 53.7
Thecc.05G176100 Theobroma cacao HOM05D006237 ORTHO05D002967 7.0e-27 124.8 188 46.8
CsaV3_5G001160 Cucumis sativus L. HOM05D006237 ORTHO05D002967 9.1e-27 124.4 177 48.6
CDE06G2505 Ceratophyllum demersum HOM05D003460 ORTHO05D004277 1.2e-26 124.0 184 45.7
MELO3C005830.2 Cucumis melo HOM05D006237 ORTHO05D002967 1.6e-26 123.6 174 50.0
Gohir.A09G129100 Gossypium hirsutum HOM05D006237 ORTHO05D002967 2.0e-26 123.2 156 51.3
Gorai.006G144100 Gossypium raimondii HOM05D006237 ORTHO05D002967 2.0e-26 123.2 156 51.3
Migut.F00315 Erythranthe guttata HOM05D006237 ORTHO05D002967 2.6e-26 122.9 140 56.4
AUR62027921 Chenopodium quinoa HOM05D006237 ORTHO05D002967 3.5e-26 122.5 139 54.7
Lj3g0001662 Lotus japonicus HOM05D006237 ORTHO05D002967 3.5e-26 122.5 170 50.0
arahy.Tifrunner.gnm1.ann1.C9TN30 Arachis hypogaea HOM05D006237 ORTHO05D002967 4.5e-26 122.1 202 46.5
QL09p013331 Quercus lobata HOM05D006237 ORTHO05D002967 4.5e-26 122.1 94 70.2
Ciclev10005229m.g Citrus clementina HOM05D006237 ORTHO05D002967 5.9e-26 121.7 173 49.7
AUR62020779 Chenopodium quinoa HOM05D006237 ORTHO05D002967 7.7e-26 121.3 141 54.6
FAN09G4095 Fragaria x ananassa HOM05D006237 ORTHO05D002967 1.0e-25 120.9 154 50.0
SalBow4G0349 Salvia bowleyana HOM05D006237 ORTHO05D002967 1.0e-25 120.9 171 51.5
Ca_08896_v3 Cicer arietinum L. HOM05D006237 ORTHO05D002967 1.3e-25 120.6 189 46.0
ClCG01G001020 Citrullus lanatus HOM05D006237 ORTHO05D002967 2.2e-25 119.8 164 49.4
Atru.chr1.396 Acer truncatum HOM05D006237 ORTHO05D002967 2.9e-25 119.4 138 57.2
Ah.16g108280 Amaranthus hybridus HOM05D006237 ORTHO05D002967 1.1e-24 117.5 156 51.9
Psat6g075200 Pisum sativum HOM05D006237 ORTHO05D002967 2.5e-24 116.3 191 46.1
Sabra12G0108700 Salix brachista HOM05D006237 ORTHO05D002967 4.2e-24 115.5 193 43.0
Phvul.011G076300 Phaseolus vulgaris HOM05D006237 ORTHO05D002967 5.5e-24 115.2 170 45.3
Glyma.12G020800 Glycine max HOM05D006237 ORTHO05D002967 1.6e-23 113.6 168 47.0
Lalb_Chr19g0139751 Lupinus albus HOM05D006237 ORTHO05D002967 2.1e-23 113.2 182 46.7
ECA248G0219 Erigeron canadensis HOM05D006237 ORTHO05D002967 2.7e-23 112.8 168 47.6
Lalb_Chr01g0001091 Lupinus albus HOM05D006237 ORTHO05D002967 2.7e-23 112.8 169 46.2
THA.LOC104821384 Tarenaya hassleriana HOM05D006237 ORTHO05D002967 2.7e-23 112.8 219 39.7
BcaB01g00750 Brassica carinata HOM05D006237 ORTHO05D002967 6.1e-23 111.7 103 62.1
Glyma.11G094400 Glycine max HOM05D006237 ORTHO05D002967 6.1e-23 111.7 169 45.6
Rhsim03G0189600 Rhododendron simsii HOM05D006237 ORTHO05D002967 6.1e-23 111.7 183 44.8
TPR.G21017 Trifolium pratense HOM05D006237 ORTHO05D002967 8.0e-23 111.3 190 45.3
VMungo1127G1244 Vigna mungo HOM05D001780 ORTHO05D004373 8.0e-23 111.3 173 46.8
CARHR157920 Cardamine hirsuta HOM05D006237 ORTHO05D002967 1.0e-22 110.9 95 64.2
Sp5g12990 Schrenkiella parvula HOM05D006237 ORTHO05D002967 1.0e-22 110.9 95 63.2
BcaC07g39385 Brassica carinata HOM05D006237 ORTHO05D002967 1.4e-22 110.5 103 61.2
C08p24080 Brassica napus HOM05D006237 ORTHO05D002967 1.4e-22 110.5 103 61.2
BolC8t50029H Brassica oleracea HOM05D006237 ORTHO05D002967 1.4e-22 110.5 103 61.2
AL5G28600 Arabidopsis lyrata HOM05D006237 ORTHO05D002967 2.3e-22 109.8 105 60.0
AT3G49080 Arabidopsis thaliana HOM05D006237 ORTHO05D002967 2.3e-22 109.8 105 60.0
Carub.0005s1528 Capsella rubella HOM05D006237 ORTHO05D002967 2.3e-22 109.8 95 63.2
Aa31LG4G17550 Aethionema arabicum HOM05D006237 ORTHO05D002967 3.0e-22 109.4 179 43.0
A06p18660 Brassica napus HOM05D006237 ORTHO05D002967 3.0e-22 109.4 186 44.6
Thhalv10010396m.g Eutrema salsugineum HOM05D006237 ORTHO05D002967 5.2e-22 108.6 127 55.1
Oeu048745.1 Olea europaea HOM05D006237 ORTHO05D002967 5.2e-22 108.6 226 39.8
BraA06t24944Z Brassica rapa HOM05D006237 ORTHO05D002967 6.7e-22 108.2 129 54.3
vmacro12929 Vaccinium macrocarpon HOM05D006237 ORTHO05D002967 2.6e-21 106.3 83 65.1
HanXRQChr02g0055961 Helianthus annuus HOM05D006237 ORTHO05D002967 7.5e-21 104.8 185 44.9
PSO566G0038 Papaver somniferum HOM05D006237 ORTHO05D002967 1.7e-20 103.6 162 47.5
Zm00001eb329680 Zea mays HOM05D006237 ORTHO05D002967 2.2e-20 103.2 174 44.8
CAN.G65.182 Capsicum annuum HOM05D006237 ORTHO05D002967 3.7e-20 102.4 90 60.0
PSO173G0153 Papaver somniferum HOM05D006237 ORTHO05D002967 4.8e-20 102.1 180 43.9
Os07g0658200 Oryza sativa ssp. japonica HOM05D006237 ORTHO05D002967 1.1e-19 100.9 82 65.9
Phvul.011G049550 Phaseolus vulgaris HOM05D006237 ORTHO05D002967 2.0e-18 96.7 80 65.0
Medtr3g078370 Medicago truncatula HOM05D006237 ORTHO05D002967 2.7e-18 96.3 199 39.7
Gohir.D09G125100 Gossypium hirsutum HOM05D006237 ORTHO05D002967 7.7e-18 94.7 170 42.9
SEGI_03568 Sequoiadendron giganteum HOM05D006237 ORTHO05D002967 1.7e-17 93.6 78 61.5
SHI13756 Sapria himalayana HOM05D006237 ORTHO05D002967 3.8e-17 92.4 193 39.4
Oeu022599.1 Olea europaea HOM05D006237 ORTHO05D002967 5.7e-13 78.6 204 33.8
Lj4A176T35 Lonicera japonica HOM05D006237 ORTHO05D002967 4.1e-11 72.4 62 62.9
Pp3c4_6350 Physcomitrium patens HOM05D006237 ORTHO05D002967 5.9e-10 68.6 75 58.7
Rhsim09G0091100 Rhododendron simsii HOM05D006237 ORTHO05D002967 1.0e-09 67.8 86 51.2
Mapoly0187s0001 Marchantia polymorpha HOM05D006237 ORTHO05D002967 1.1e-08 64.3 81 51.9
C03p65840 Brassica napus HOM05D006237 ORTHO05D002967 2.8e-07 59.7 80 47.5
BolC3t18842H Brassica oleracea HOM05D006237 ORTHO05D002967 2.8e-07 59.7 80 47.5
BraA06t25746Z Brassica rapa HOM05D006237 ORTHO05D027135 5.2e-06 55.5 48 64.6


User provided reference genes

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