Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 6.9e-273 943.3 472 100.0
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 3.2e-153 545.8 420 63.1
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 3.7e-149 532.3 418 62.9
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 2.2e-146 523.1 417 60.7
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 6.5e-146 521.5 424 60.4
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.2e-145 519.2 479 56.6
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 5.5e-145 518.5 424 59.7
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 9.4e-145 517.7 425 60.5
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 1.6e-144 516.9 418 61.2
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 4.7e-144 515.4 438 59.1
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 6.1e-144 515.0 443 59.8
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 1.0e-143 514.2 423 60.0
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 1.8e-143 513.5 423 59.6
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 2.3e-143 513.1 424 60.4
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 2.3e-143 513.1 423 59.6
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 2.3e-143 513.1 432 59.5
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 4.0e-143 512.3 396 63.4
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 6.7e-143 511.5 417 60.4
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 8.8e-143 511.1 455 55.8
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 1.2e-142 510.8 429 60.8
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 3.3e-142 509.2 446 58.3
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 4.4e-142 508.8 435 58.6
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 9.7e-142 507.7 421 59.9
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 9.7e-142 507.7 468 57.1
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 2.2e-141 506.5 420 59.8
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 4.8e-141 505.4 449 57.0
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 1.1e-140 504.2 453 56.3
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 1.4e-140 503.8 420 59.8
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 1.8e-140 503.4 420 59.3
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 2.4e-140 503.1 431 58.0
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 2.4e-140 503.1 419 60.4
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 3.1e-140 502.7 418 58.6
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 4.1e-140 502.3 431 57.5
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 9.1e-140 501.1 425 59.5
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 9.1e-140 501.1 446 56.7
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 1.2e-139 500.7 425 58.1
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 1.2e-139 500.7 454 55.5
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 3.5e-139 499.2 421 58.0
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 1.3e-138 497.3 421 56.8
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 1.7e-138 496.9 453 55.0
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 3.8e-138 495.7 457 54.9
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 3.8e-138 495.7 423 58.9
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 5.0e-138 495.4 424 58.3
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 5.0e-138 495.4 460 55.2
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 6.5e-138 495.0 446 57.2
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 8.5e-138 494.6 430 57.2
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.5e-137 493.8 464 56.5
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 3.2e-137 492.7 430 56.5
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 3.2e-137 492.7 446 56.5
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 7.2e-137 491.5 446 57.0
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 1.4e-135 487.3 461 55.3
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 4.0e-135 485.7 500 51.8
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 5.2e-135 485.3 419 56.8
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 6.8e-135 485.0 470 54.3
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 6.8e-135 485.0 486 53.5
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 2.6e-134 483.0 393 59.5
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 4.4e-134 482.3 422 57.3
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 4.4e-134 482.3 459 52.3
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 4.4e-134 482.3 433 56.4
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 7.5e-134 481.5 421 58.0
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 3.1e-132 476.1 420 57.9
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 7.0e-132 474.9 444 56.1
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 2.0e-131 473.4 419 55.6
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 4.5e-131 472.2 444 55.9
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 5.9e-131 471.9 420 57.1
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.0e-130 471.1 433 55.0
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 1.3e-130 470.7 421 57.0
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 1.7e-130 470.3 444 55.2
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 7.2e-129 464.9 421 57.2
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 8.0e-128 461.5 422 57.3
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 2.3e-127 459.9 422 57.3
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 2.3e-127 459.9 453 53.2
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 2.6e-126 456.4 422 57.1
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.3e-125 454.1 417 56.1
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 8.3e-125 451.4 389 58.6
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 2.4e-124 449.9 437 51.5
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 1.7e-122 443.7 437 51.0
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 2.5e-121 439.9 453 53.0
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 3.0e-119 433.0 437 52.9
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 6.8e-119 431.8 485 48.0
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.5e-118 430.6 436 52.8
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 4.4e-118 429.1 422 51.7
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.5e-115 419.5 432 52.1
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 9.8e-110 401.4 347 58.2
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 1.9e-108 397.1 344 57.8
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 3.2e-108 396.4 393 49.1
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 5.4e-108 395.6 363 54.5
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.2e-104 384.4 429 49.9
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 5.2e-103 379.0 311 60.8
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 1.7e-101 374.0 308 60.7
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 8.6e-98 361.7 315 57.5
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 9.5e-97 358.2 290 59.7
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 1.2e-96 357.8 367 53.4
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 2.1e-96 357.1 383 48.0
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 1.4e-95 354.4 321 55.8
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 3.4e-94 349.7 424 44.3
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 1.6e-91 340.9 315 54.9
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 6.6e-90 335.5 313 55.6
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 9.6e-81 305.1 313 51.1
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 1.6e-80 304.3 313 50.2
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 1.1e-79 301.6 219 65.3
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 6.0e-75 285.8 400 42.2
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 8.7e-66 255.4 421 40.4
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 4.3e-65 253.1 352 41.8
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 1.1e-63 248.4 211 58.8
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 6.9e-63 245.7 234 55.6
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 4.9e-61 239.6 173 63.0
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 4.6e-59 233.0 211 55.0
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 3.4e-54 216.9 210 52.4
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 1.0e-50 205.3 209 53.1
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 3.1e-47 193.7 168 60.1
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 5.3e-47 193.0 233 45.1
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 8.2e-40 169.1 130 61.5
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 8.2e-40 169.1 124 66.9
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 3.1e-31 140.6 75 96.0
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 5.9e-30 136.3 142 51.4
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 3.2e-28 130.6 132 51.5
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 1.5e-25 121.7 128 50.8
Mapoly0062s0088 Marchantia polymorpha HOM05D005800 ORTHO05D026664 3.4e-25 120.6 381 26.2
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 1.7e-24 118.2 74 71.6
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 1.7e-21 108.2 103 48.5
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 1.2e-19 102.1 373 24.7
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 7.7e-14 82.8 117 42.7
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis HOM05D005800 ORTHO05D026664 1.9e-12 78.2 396 23.5
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 1.2e-06 58.9 71 50.7
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 3.5e-06 57.4 40 70.0


User provided reference genes

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