Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 6.3e-49 197.2 105 100.0
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 2.0e-31 139.0 75 96.0
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 5.9e-23 110.9 76 69.7
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 1.0e-22 110.2 76 72.4
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 1.3e-22 109.8 76 69.7
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 1.7e-22 109.4 76 68.4
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 2.2e-22 109.0 76 71.1
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 2.2e-22 109.0 76 71.1
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 2.9e-22 108.6 76 68.4
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 5.0e-22 107.8 109 55.0
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 1.1e-21 106.7 75 68.0
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 1.5e-21 106.3 75 68.0
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 1.9e-21 105.9 98 58.2
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 2.5e-21 105.5 75 69.3
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 2.5e-21 105.5 75 73.3
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 3.2e-21 105.1 75 69.3
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 4.2e-21 104.8 78 66.7
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 4.2e-21 104.8 76 69.7
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 4.2e-21 104.8 76 68.4
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 4.2e-21 104.8 76 68.4
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 5.5e-21 104.4 75 69.3
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 5.5e-21 104.4 76 68.4
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 7.2e-21 104.0 75 65.3
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 7.2e-21 104.0 75 68.0
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 9.4e-21 103.6 75 68.0
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 9.4e-21 103.6 75 66.7
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 9.4e-21 103.6 75 66.7
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 9.4e-21 103.6 75 68.0
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 1.2e-20 103.2 76 67.1
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 1.2e-20 103.2 75 65.3
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.2e-20 103.2 75 68.0
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 1.2e-20 103.2 75 68.0
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 1.6e-20 102.8 76 67.1
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 1.6e-20 102.8 76 67.1
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 1.6e-20 102.8 75 65.3
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 2.1e-20 102.4 75 68.0
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 2.7e-20 102.1 76 67.1
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 2.7e-20 102.1 75 66.7
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 2.7e-20 102.1 98 57.1
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 2.7e-20 102.1 75 68.0
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 3.6e-20 101.7 71 69.0
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 3.6e-20 101.7 76 68.4
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 3.6e-20 101.7 75 68.0
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 4.7e-20 101.3 76 67.1
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 4.7e-20 101.3 76 67.1
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 4.7e-20 101.3 100 58.0
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 4.7e-20 101.3 75 68.0
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 6.1e-20 100.9 100 55.0
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 6.1e-20 100.9 75 68.0
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 6.1e-20 100.9 76 64.5
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 8.0e-20 100.5 75 64.0
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 8.0e-20 100.5 76 65.8
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 8.0e-20 100.5 75 66.7
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 1.0e-19 100.1 75 68.0
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 1.0e-19 100.1 75 68.0
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 1.0e-19 100.1 76 65.8
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 1.0e-19 100.1 76 67.1
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 1.0e-19 100.1 98 55.1
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 1.4e-19 99.8 98 55.1
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 1.8e-19 99.4 75 65.3
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 1.8e-19 99.4 74 66.2
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 2.3e-19 99.0 75 66.7
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 2.3e-19 99.0 72 69.4
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 2.3e-19 99.0 76 68.4
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 2.3e-19 99.0 74 66.2
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 3.0e-19 98.6 98 56.1
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 4.0e-19 98.2 75 64.0
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 4.0e-19 98.2 82 62.2
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 4.0e-19 98.2 98 56.1
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 5.2e-19 97.8 75 62.7
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 5.2e-19 97.8 75 62.7
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 5.2e-19 97.8 76 65.8
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 6.8e-19 97.4 75 66.7
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 1.2e-18 96.7 75 65.3
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.5e-18 96.3 74 64.9
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.5e-18 96.3 98 56.1
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.5e-18 96.3 98 56.1
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 2.6e-18 95.5 75 61.3
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.6e-18 95.5 76 64.5
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 4.4e-18 94.7 74 63.5
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 4.4e-18 94.7 74 64.9
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 7.5e-18 94.0 97 52.6
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 7.5e-18 94.0 72 62.5
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 1.3e-17 93.2 75 64.0
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 1.7e-17 92.8 76 63.2
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 2.2e-17 92.4 74 63.5
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 2.8e-17 92.0 83 57.8
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 2.8e-17 92.0 75 61.3
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 3.7e-17 91.7 75 61.3
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 8.3e-17 90.5 76 60.5
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 1.1e-16 90.1 76 57.9
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 1.1e-16 90.1 75 60.0
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 1.8e-16 89.4 76 61.8
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 2.4e-16 89.0 76 60.5
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 2.4e-16 89.0 76 57.9
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 4.1e-16 88.2 75 60.0
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 4.1e-16 88.2 97 50.5
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 4.1e-16 88.2 97 50.5
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 4.1e-16 88.2 97 50.5
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 4.1e-16 88.2 75 60.0
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 7.0e-16 87.4 76 59.2
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 9.1e-16 87.0 76 59.2
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 1.6e-15 86.3 97 48.5
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 2.0e-15 85.9 97 50.5
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 3.8e-14 81.6 55 67.3
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 1.9e-13 79.3 67 59.7
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 2.7e-12 75.5 75 52.0
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 2.3e-06 55.8 36 69.4
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 3.8e-06 55.1 35 68.6


User provided reference genes

Program Settings