Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1128G075 Amborella trichopoda HOM05D002336 ORTHO05D002526 1.1e-104 383.3 195 100.0
ATR0751G251 Amborella trichopoda HOM05D002336 ORTHO05D002526 3.0e-44 182.6 148 72.3
Ah.01g002070 Amaranthus hybridus HOM05D002336 ORTHO05D002526 3.7e-18 95.9 140 40.0
MBI17_g08176_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 2.6e-16 89.7 185 36.2
MD10G1340900 Malus domestica HOM05D002336 ORTHO05D002526 2.6e-16 89.7 159 38.4
MD05G1363300 Malus domestica HOM05D002336 ORTHO05D002526 1.3e-15 87.4 158 37.3
Duzib235G1184 Durio zibethinus HOM05D002336 ORTHO05D002526 1.7e-15 87.0 165 36.4
Peaxi162Scf00811g00442 Petunia axillaris HOM05D002336 ORTHO05D002526 2.2e-15 86.7 169 35.5
Gohir.A06G157300 Gossypium hirsutum HOM05D002336 ORTHO05D002526 3.8e-15 85.9 151 35.8
Gorai.010G190700 Gossypium raimondii HOM05D002336 ORTHO05D002526 4.9e-15 85.5 151 35.8
MBI19_g01939_MAGBIO Magnolia biondii HOM05D002336 ORTHO05D002526 6.4e-15 85.1 162 37.7
Gohir.D06G163600 Gossypium hirsutum HOM05D002336 ORTHO05D002526 8.4e-15 84.7 151 35.8
Sc17g0008060 Simmondsia chinensis HOM05D002336 ORTHO05D002526 1.1e-14 84.3 174 36.2
Thecc.06G242900 Theobroma cacao HOM05D002336 ORTHO05D002526 2.4e-14 83.2 179 35.8
GSVIVG01003467001 Vitis vinifera HOM05D002336 ORTHO05D002526 2.4e-14 83.2 168 36.3
Prupe.4G002300 Prunus persica HOM05D002336 ORTHO05D002526 5.5e-14 82.0 165 36.4
RcHm_v2.0_Chr5g0000271 Rosa chinensis HOM05D002336 ORTHO05D002526 5.5e-14 82.0 135 35.6
CiPaw.10G083700 Carya illinoinensis HOM05D002336 ORTHO05D002526 7.1e-14 81.6 149 36.2
Dinv07137 Davidia involucrata HOM05D002336 ORTHO05D002526 7.1e-14 81.6 187 34.2
FAN06G2551 Fragaria x ananassa HOM05D002336 ORTHO05D002526 2.1e-13 80.1 124 40.3
PSO210G5018 Papaver somniferum HOM05D002336 ORTHO05D002526 2.1e-13 80.1 168 32.7
CANSAT56G2025 Cannabis sativa HOM05D002336 ORTHO05D002526 2.7e-13 79.7 148 35.8
CSS0011496 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 3.5e-13 79.3 174 35.1
PSO210G4730 Papaver somniferum HOM05D002336 ORTHO05D002526 6.0e-13 78.6 173 31.8
FvH4_3g00201 Fragaria vesca HOM05D002336 ORTHO05D002526 7.9e-13 78.2 157 32.5
FAN21G1357 Fragaria x ananassa HOM05D002336 ORTHO05D002526 7.9e-13 78.2 173 32.9
Hma1.2p1_0394F.1_g143540 Hydrangea macrophylla HOM05D002336 ORTHO05D002526 1.0e-12 77.8 169 33.1
EL10Ac9g22885 Beta vulgaris HOM05D002336 ORTHO05D002526 1.3e-12 77.4 154 35.1
Atru.chr1.2178 Acer truncatum HOM05D002336 ORTHO05D002526 1.8e-12 77.0 158 32.9
Lalb_Chr18g0057441 Lupinus albus HOM05D002336 ORTHO05D002526 1.8e-12 77.0 137 35.8
Nn1g07725 Nelumbo nucifera HOM05D002336 ORTHO05D002526 2.3e-12 76.6 158 33.5
Psat1g171880 Pisum sativum HOM05D002336 ORTHO05D002526 2.3e-12 76.6 161 31.7
Sed0019231 Sechium edule HOM05D002336 ORTHO05D002526 2.3e-12 76.6 150 36.0
Manes.09G085000 Manihot esculenta HOM05D002336 ORTHO05D002526 3.0e-12 76.3 157 32.5
AUR62015177 Chenopodium quinoa HOM05D002336 ORTHO05D002526 5.1e-12 75.5 143 35.0
Rhsim13G0138400 Rhododendron simsii HOM05D002336 ORTHO05D002526 5.1e-12 75.5 180 31.7
Cfa000015 Carpinus fangiana HOM05D002336 ORTHO05D002526 8.7e-12 74.7 169 30.8
Lalb_Chr20g0119621 Lupinus albus HOM05D002336 ORTHO05D002526 8.7e-12 74.7 171 33.3
CDE07G0676 Ceratophyllum demersum HOM05D002336 ORTHO05D002526 1.1e-11 74.3 132 34.8
COL.COLO4_31953 Corchorus olitorius HOM05D002336 ORTHO05D002526 1.1e-11 74.3 170 32.9
Eucgr.D00945 Eucalyptus grandis HOM05D002336 ORTHO05D002526 1.1e-11 74.3 166 33.1
Lj6g0012975 Lotus japonicus HOM05D002336 ORTHO05D002526 1.1e-11 74.3 143 32.9
THA.LOC104823021 Tarenaya hassleriana HOM05D002336 ORTHO05D002526 1.1e-11 74.3 151 33.8
Sp2g12487 Schrenkiella parvula HOM05D002336 ORTHO05D002526 1.9e-11 73.6 149 32.2
Zm00001eb189090 Zea mays HOM05D002336 ORTHO05D002526 1.9e-11 73.6 128 36.7
Medtr2g027530 Medicago truncatula HOM05D002336 ORTHO05D002526 2.5e-11 73.2 163 31.3
CsaV3_6G048110 Cucumis sativus L. HOM05D002336 ORTHO05D002526 3.3e-11 72.8 149 34.2
Nitab4.5_0010199g0060 Nicotiana tabacum HOM05D002336 ORTHO05D002526 3.3e-11 72.8 182 33.0
MELO3C007997.2 Cucumis melo HOM05D002336 ORTHO05D002526 7.4e-11 71.6 149 34.2
PGR004G0111 Punica granatum HOM05D002336 ORTHO05D002526 7.4e-11 71.6 168 31.0
Sabra16G0008400 Salix brachista HOM05D000456 ORTHO05D000887 7.4e-11 71.6 172 32.6
QL05p066607 Quercus lobata HOM05D002336 ORTHO05D002526 9.6e-11 71.2 162 31.5
Hund21625 Selenicereus undatus HOM05D002336 ORTHO05D002526 9.6e-11 71.2 138 39.1
A02p31610 Brassica napus HOM05D002336 ORTHO05D002526 1.3e-10 70.9 149 30.2
Solyc04g015180.3 Solanum lycopersicum HOM05D002336 ORTHO05D002526 1.3e-10 70.9 168 32.7
Duzib235G0330 Durio zibethinus HOM05D002336 ORTHO05D002526 1.6e-10 70.5 187 31.6
Thhalv10001026m.g Eutrema salsugineum HOM05D002336 ORTHO05D002526 1.6e-10 70.5 167 31.7
SalBow8G5548 Salvia bowleyana HOM05D002336 ORTHO05D002526 1.6e-10 70.5 138 39.1
Ciclev10016499m.g Citrus clementina HOM05D002336 ORTHO05D002526 2.1e-10 70.1 181 32.6
Potri.016G003200 Populus trichocarpa HOM05D002336 ORTHO05D002526 2.1e-10 70.1 175 32.0
Prupe.4G017900 Prunus persica HOM05D002336 ORTHO05D002526 2.1e-10 70.1 113 39.8
QL03p035757 Quercus lobata HOM05D002336 ORTHO05D002526 2.1e-10 70.1 153 34.6
Sopen04g007220 Solanum pennellii HOM05D002336 ORTHO05D002526 2.1e-10 70.1 169 33.1
vmacro03592 Vaccinium macrocarpon HOM05D002336 ORTHO05D002526 2.1e-10 70.1 178 31.5
SGA_v2.0_scaffold7G03662 Striga asiatica HOM05D002336 ORTHO05D002526 4.8e-10 68.9 165 31.5
Aqoxy3G03324 Aquilegia oxysepala HOM05D002336 ORTHO05D002526 6.2e-10 68.6 173 31.2
Cc09_g00160 Coffea canephora HOM05D002336 ORTHO05D002526 8.2e-10 68.2 151 31.1
C02p48950 Brassica napus HOM05D002336 ORTHO05D002526 1.1e-09 67.8 128 32.8
FAN19G0974 Fragaria x ananassa HOM05D002336 ORTHO05D002526 1.1e-09 67.8 133 37.6
Ca_00777_v3 Cicer arietinum L. HOM05D000491 ORTHO05D000359 1.4e-09 67.4 168 30.4
ECA248G0907 Erigeron canadensis HOM05D002336 ORTHO05D002526 3.1e-09 66.2 162 30.9
Os02g0723300 Oryza sativa ssp. japonica HOM05D002336 ORTHO05D002526 3.1e-09 66.2 174 30.5
unitig_32.g11410 Utricularia gibba HOM05D002336 ORTHO05D002526 3.1e-09 66.2 150 32.7
AL7G39320 Arabidopsis lyrata HOM05D002336 ORTHO05D002526 5.3e-09 65.5 148 33.8
MSTRG.16067 Avicennia marina HOM05D002336 ORTHO05D002526 6.9e-09 65.1 166 31.9
arahy.Tifrunner.gnm1.ann1.WK75UE Arachis hypogaea HOM05D002336 ORTHO05D002526 2.0e-08 63.5 161 32.9
Lj5g0017254 Lotus japonicus HOM05D002336 ORTHO05D002526 3.4e-08 62.8 108 35.2
Phvul.006G135800 Phaseolus vulgaris HOM05D002336 ORTHO05D002526 3.4e-08 62.8 165 27.9
Carub.0007s2571 Capsella rubella HOM05D002336 ORTHO05D002526 4.5e-08 62.4 123 33.3
BolC2t10989H Brassica oleracea HOM05D000111 ORTHO05D007071 5.8e-08 62.0 121 30.6
Actinidia02276 Actinidia chinensis HOM05D002336 ORTHO05D002526 7.6e-08 61.6 180 30.0
BraA02t08164Z Brassica rapa HOM05D002336 ORTHO05D002526 7.6e-08 61.6 121 30.6
Aa31sc504G30 Aethionema arabicum HOM05D002336 ORTHO05D002526 1.0e-07 61.2 113 32.7
ECA220G0003 Erigeron canadensis HOM05D002336 ORTHO05D002526 1.7e-07 60.5 146 31.5
Glyma.09G016100 Glycine max HOM05D002336 ORTHO05D002526 1.7e-07 60.5 176 26.7
SGA_v2.0_scaffold186G40142 Striga asiatica HOM05D002336 ORTHO05D002526 1.7e-07 60.5 157 30.6
TWI38G0736 Tripterygium wilfordii HOM05D002336 ORTHO05D002526 1.7e-07 60.5 148 29.7
VMungo0540G1254 Vigna mungo HOM05D002336 ORTHO05D002526 2.2e-07 60.1 174 27.6
DCAR_019144 Daucus carota HOM05D002336 ORTHO05D002526 2.9e-07 59.7 87 44.8
Lsat_1_v5_gn_1_130320 Lactuca sativa HOM05D002176 ORTHO05D002598 2.9e-07 59.7 96 37.5
Rhsim08G0216900 Rhododendron simsii HOM05D002659 ORTHO05D002526 2.9e-07 59.7 145 33.1
CARHR290530 Cardamine hirsuta HOM05D002336 ORTHO05D002526 4.9e-07 58.9 123 30.9
arahy.Tifrunner.gnm1.ann1.7YIN9J Arachis hypogaea HOM05D002336 ORTHO05D002526 6.5e-07 58.5 150 31.3
Prupe.6G171500 Prunus persica HOM05D002336 ORTHO05D002526 6.5e-07 58.5 131 33.6
ClCG01G021110 Citrullus lanatus HOM05D002336 ORTHO05D002526 8.4e-07 58.2 126 34.1
MD15G1331500 Malus domestica HOM05D002336 ORTHO05D002526 8.4e-07 58.2 131 33.6
Glyma.15G121800 Glycine max HOM05D002336 ORTHO05D002526 1.1e-06 57.8 168 26.2
RcHm_v2.0_Chr2g0117051 Rosa chinensis HOM05D002336 ORTHO05D002526 1.1e-06 57.8 131 33.6
Migut.M01463 Erythranthe guttata HOM05D002336 ORTHO05D002526 1.4e-06 57.4 162 30.2
FvH4_1g22750 Fragaria vesca HOM05D002336 ORTHO05D002526 1.9e-06 57.0 131 33.6
Oeu031381.1 Olea europaea HOM05D002336 ORTHO05D002526 1.9e-06 57.0 150 34.7
CDE08G1499 Ceratophyllum demersum HOM05D002336 ORTHO05D002526 2.5e-06 56.6 118 34.7
AUR62017630 Chenopodium quinoa HOM05D002336 ORTHO05D002526 2.5e-06 56.6 147 31.3
Oeu025979.1 Olea europaea HOM05D002336 ORTHO05D002526 2.5e-06 56.6 170 28.8
Sed0001348 Sechium edule HOM05D002336 ORTHO05D002526 2.5e-06 56.6 131 30.5
THA.LOC104799288 Tarenaya hassleriana HOM05D002336 ORTHO05D002526 2.5e-06 56.6 131 30.5
CAN.G1456.5 Capsicum annuum HOM05D002336 ORTHO05D002526 3.2e-06 56.2 163 28.2
CANSAT01G2839 Cannabis sativa HOM05D002336 ORTHO05D002526 5.5e-06 55.5 131 29.8
PGR102G1725 Punica granatum HOM05D002336 ORTHO05D002526 5.5e-06 55.5 131 29.0
CSS0043110 Camellia sinensis var. sinensis HOM05D002336 ORTHO05D002526 7.1e-06 55.1 131 29.8
ClCG11G005590 Citrullus lanatus HOM05D002336 ORTHO05D002526 7.1e-06 55.1 131 31.3
MELO3C020022.2 Cucumis melo HOM05D002336 ORTHO05D002526 7.1e-06 55.1 131 31.3
CsaV3_6G002410 Cucumis sativus L. HOM05D002336 ORTHO05D002526 7.1e-06 55.1 131 31.3
Manes.09G146500 Manihot esculenta HOM05D002336 ORTHO05D002526 7.1e-06 55.1 131 32.1
QL06p031971 Quercus lobata HOM05D002336 ORTHO05D002526 7.1e-06 55.1 131 29.8
Thecc.01G114000 Theobroma cacao HOM05D002336 ORTHO05D002526 7.1e-06 55.1 131 29.0
GSVIVG01020782001 Vitis vinifera HOM05D002336 ORTHO05D002526 7.1e-06 55.1 131 29.8
Actinidia27104 Actinidia chinensis HOM05D002336 ORTHO05D002526 9.3e-06 54.7 136 29.4
HanXRQChr15g0471591 Helianthus annuus HOM05D002336 ORTHO05D002526 9.3e-06 54.7 136 27.9


User provided reference genes

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