Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 8.6e-150 535.4 561 100.0
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 3.8e-89 334.0 243 75.3
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 7.2e-88 329.7 236 75.4
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 7.2e-88 329.7 243 74.1
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 9.4e-88 329.3 243 72.8
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.2e-87 328.9 236 74.2
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 1.2e-87 328.9 243 75.3
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 3.9e-86 323.9 241 74.7
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 5.1e-86 323.6 236 70.3
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 6.7e-86 323.2 243 73.7
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 2.0e-85 321.6 243 73.7
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 4.4e-85 320.5 243 72.4
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 5.7e-85 320.1 243 72.0
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 5.7e-85 320.1 245 70.6
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 5.7e-85 320.1 236 69.9
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 5.7e-85 320.1 243 72.8
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 7.4e-85 319.7 218 79.4
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.3e-84 318.9 241 71.4
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 1.7e-84 318.5 243 72.4
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 2.2e-84 318.2 236 69.5
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 2.2e-84 318.2 239 65.3
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 2.2e-84 318.2 244 70.1
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 6.3e-84 316.6 243 71.2
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 1.4e-83 315.5 234 73.1
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 1.4e-83 315.5 236 69.1
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 1.8e-83 315.1 236 73.3
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 4.1e-83 313.9 244 70.5
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 7.0e-83 313.2 242 71.5
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 7.0e-83 313.2 236 71.6
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 7.0e-83 313.2 233 69.5
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 7.0e-83 313.2 233 73.0
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 9.1e-83 312.8 235 72.3
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 2.0e-82 311.6 243 72.0
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 7.7e-82 309.7 252 69.0
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 1.7e-81 308.5 235 71.1
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 3.8e-81 307.4 244 68.0
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 3.8e-81 307.4 240 70.4
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 5.0e-81 307.0 237 72.6
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 8.5e-81 306.2 236 71.6
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 1.1e-80 305.8 234 70.9
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 1.9e-80 305.1 245 67.3
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 1.9e-80 305.1 240 69.6
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 1.9e-80 305.1 244 69.7
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 2.5e-80 304.7 234 70.5
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 3.2e-80 304.3 245 64.5
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 4.2e-80 303.9 233 70.4
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 5.5e-80 303.5 235 69.8
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 5.5e-80 303.5 235 69.8
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 5.5e-80 303.5 233 72.5
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 9.4e-80 302.8 244 68.9
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 9.4e-80 302.8 263 65.8
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 9.4e-80 302.8 240 69.2
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.6e-79 302.0 243 67.1
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 2.1e-79 301.6 244 67.2
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 2.1e-79 301.6 235 69.4
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 2.1e-79 301.6 235 69.4
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 4.7e-79 300.4 244 64.3
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 8.0e-79 299.7 233 71.2
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 8.0e-79 299.7 244 67.6
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 1.0e-78 299.3 258 60.1
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 1.4e-78 298.9 236 70.3
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 1.4e-78 298.9 236 70.8
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 2.3e-78 298.1 235 69.8
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 2.3e-78 298.1 274 62.0
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 5.2e-78 297.0 246 66.3
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 5.2e-78 297.0 242 69.0
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 1.7e-76 292.0 242 65.7
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 8.2e-76 289.7 224 71.9
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 8.2e-76 289.7 244 65.2
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 1.6e-74 285.4 234 69.7
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 5.9e-74 283.5 214 73.4
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 7.7e-74 283.1 217 70.5
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 5.0e-73 280.4 243 63.8
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 9.4e-72 276.2 243 65.8
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 9.4e-72 276.2 223 66.8
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 1.0e-70 272.7 217 66.8
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 1.4e-70 272.3 207 72.9
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 2.0e-66 258.5 241 59.8
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 1.6e-58 232.3 153 78.4
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 3.4e-53 214.5 161 72.7
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 9.2e-51 206.5 155 69.0
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 3.6e-47 194.5 243 51.4
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 4.0e-46 191.0 242 50.8
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 6.4e-44 183.7 149 71.8
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 1.4e-43 182.6 148 74.3
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 1.9e-43 182.2 149 72.5
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 2.4e-43 181.8 149 72.5
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 5.2e-38 164.1 137 64.2
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 2.0e-37 162.2 179 54.7
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 3.4e-37 161.4 241 37.3
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 2.3e-33 148.7 110 75.5
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 2.3e-30 138.7 152 46.7
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 5.6e-24 117.5 81 66.7
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 8.9e-22 110.2 73 86.3


User provided reference genes

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