Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1098G066 Amborella trichopoda HOM05D000048 ORTHO05D026566 9.8e-29 129.4 64 100.0
ATR1098G134 Amborella trichopoda HOM05D000048 ORTHO05D004674 8.9e-14 79.7 92 53.3
CDE11G0009 Ceratophyllum demersum HOM05D000048 ORTHO05D004674 5.8e-13 77.0 92 50.0
CDE05G3118 Ceratophyllum demersum HOM05D000048 ORTHO05D004674 9.8e-13 76.3 92 50.0
FAN02G2366 Fragaria x ananassa HOM05D000048 ORTHO05D004674 9.8e-13 76.3 102 47.1
RcHm_v2.0_Chr2g0152611 Rosa chinensis HOM05D000048 ORTHO05D004674 1.7e-12 75.5 102 46.1
TAR629G3344 Trochodendron aralioides HOM05D000048 ORTHO05D004674 1.7e-12 75.5 92 50.0
MBI18_g11232_MAGBIO Magnolia biondii HOM05D000048 ORTHO05D004674 2.9e-12 74.7 92 48.9
FvH4_6g39010 Fragaria vesca HOM05D000048 ORTHO05D004674 3.7e-12 74.3 102 46.1
FAN14G2171 Fragaria x ananassa HOM05D000031 ORTHO05D004674 3.7e-12 74.3 102 46.1
MD17G1131800 Malus domestica HOM05D000048 ORTHO05D004674 4.9e-12 73.9 92 47.8
TAR626G1969 Trochodendron aralioides HOM05D000048 ORTHO05D004674 4.9e-12 73.9 92 47.8
FAN09G3048 Fragaria x ananassa HOM05D000048 ORTHO05D004674 6.4e-12 73.6 102 46.1
MD09G1145600 Malus domestica HOM05D000048 ORTHO05D004674 6.4e-12 73.6 92 46.7
Nn3g20457 Nelumbo nucifera HOM05D000048 ORTHO05D004674 6.4e-12 73.6 92 46.7
Prupe.3G180200 Prunus persica HOM05D000048 ORTHO05D004674 6.4e-12 73.6 92 46.7
CDE02G2046 Ceratophyllum demersum HOM05D000048 ORTHO05D004674 8.3e-12 73.2 92 47.8
Lj1A585T43 Lonicera japonica HOM05D000048 ORTHO05D004674 8.3e-12 73.2 92 46.7
Manes.02G142000 Manihot esculenta HOM05D000048 ORTHO05D004674 8.3e-12 73.2 92 47.8
Prupe.3G180400 Prunus persica HOM05D000048 ORTHO05D004674 8.3e-12 73.2 92 46.7
Thecc.01G164700 Theobroma cacao HOM05D000048 ORTHO05D004674 8.3e-12 73.2 92 47.8
COL.COLO4_00057 Corchorus olitorius HOM05D000048 ORTHO05D004674 1.1e-11 72.8 92 47.8
SEGI_11648 Sequoiadendron giganteum HOM05D000048 ORTHO05D004674 1.1e-11 72.8 92 46.7
SEGI_37145 Sequoiadendron giganteum HOM05D000048 ORTHO05D004674 1.1e-11 72.8 92 46.7
FAN02G2612 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.4e-11 72.4 92 47.8
MBI18_g11234_MAGBIO Magnolia biondii HOM05D000048 ORTHO05D004674 1.4e-11 72.4 92 47.8
vmacro08744 Vaccinium macrocarpon HOM05D000048 ORTHO05D004674 1.9e-11 72.0 92 46.7
Cfa015509 Carpinus fangiana HOM05D002556 ORTHO05D003153 2.4e-11 71.6 92 47.8
CiPaw.03G192300 Carya illinoinensis HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 46.7
COL.COLO4_29910 Corchorus olitorius HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 45.7
Haze_01042 Corylus avellana HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 47.8
Dinv09724 Davidia involucrata HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 46.7
Duzib147G1645 Durio zibethinus HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 46.7
Eucgr.A02048 Eucalyptus grandis HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 47.8
FvH4_2g26470 Fragaria vesca HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 46.7
FAN15G3732 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 46.7
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 46.7
FAN24G1630 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 46.7
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 46.7
MD17G1132100 Malus domestica HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 44.6
Prupe.3G180900 Prunus persica HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 45.7
RcHm_v2.0_Chr2g0152571 Rosa chinensis HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 46.7
RcHm_v2.0_Chr6g0295151 Rosa chinensis HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 46.7
THA.LOC104802287 Tarenaya hassleriana HOM05D000048 ORTHO05D004674 2.4e-11 71.6 92 44.6
Duzib264G0006 Durio zibethinus HOM05D000048 ORTHO05D004674 3.2e-11 71.2 92 45.7
Psat0s1719g0120 Pisum sativum HOM05D000048 ORTHO05D004674 3.2e-11 71.2 92 46.7
TWI59G0465 Tripterygium wilfordii HOM05D000048 ORTHO05D004674 3.2e-11 71.2 92 47.8
vmacro03957 Vaccinium macrocarpon HOM05D000048 ORTHO05D004674 3.2e-11 71.2 92 45.7
CANSAT64G2167 Cannabis sativa HOM05D000048 ORTHO05D004674 4.1e-11 70.9 92 45.7
Ciclev10018340m.g Citrus clementina HOM05D000048 ORTHO05D004674 4.1e-11 70.9 92 45.7
Potri.002G055100 Populus trichocarpa HOM05D000048 ORTHO05D004674 4.1e-11 70.9 92 46.7
Potri.005G207500 Populus trichocarpa HOM05D000048 ORTHO05D004674 5.4e-11 70.5 92 46.7
Potri.005G207600 Populus trichocarpa HOM05D000048 ORTHO05D004674 5.4e-11 70.5 92 46.7
Duzib187G1893 Durio zibethinus HOM05D000048 ORTHO05D004674 7.0e-11 70.1 92 44.6
Gohir.A09G007700 Gossypium hirsutum HOM05D000048 ORTHO05D004674 7.0e-11 70.1 92 45.7
Gohir.A12G088500 Gossypium hirsutum HOM05D000048 ORTHO05D004674 7.0e-11 70.1 92 44.6
Gohir.D09G007100 Gossypium hirsutum HOM05D000048 ORTHO05D004674 7.0e-11 70.1 92 45.7
Gohir.D12G086900 Gossypium hirsutum HOM05D000048 ORTHO05D004674 7.0e-11 70.1 92 44.6
Gorai.006G008600 Gossypium raimondii HOM05D000048 ORTHO05D004674 7.0e-11 70.1 92 45.7
Gorai.008G097100 Gossypium raimondii HOM05D000048 ORTHO05D004674 7.0e-11 70.1 92 44.6
Medtr5g090290 Medicago truncatula HOM05D000048 ORTHO05D004674 7.0e-11 70.1 92 45.7
Sabra05G0158000 Salix brachista HOM05D000048 ORTHO05D004674 7.0e-11 70.1 92 46.7
Thecc.01G164900 Theobroma cacao HOM05D000048 ORTHO05D004674 7.0e-11 70.1 92 44.6
TPR.G8782 Trifolium pratense HOM05D000048 ORTHO05D004674 7.0e-11 70.1 92 45.7
Actinidia12525 Actinidia chinensis HOM05D000048 ORTHO05D004674 9.2e-11 69.7 92 45.7
CSS0023335 Camellia sinensis var. sinensis HOM05D000048 ORTHO05D004674 9.2e-11 69.7 92 46.7
Cfa023539 Carpinus fangiana HOM05D000048 ORTHO05D004674 9.2e-11 69.7 92 45.7
CiPaw.03G149800 Carya illinoinensis HOM05D000048 ORTHO05D004674 9.2e-11 69.7 92 46.7
COL.COLO4_29901 Corchorus olitorius HOM05D000048 ORTHO05D004674 1.2e-10 69.3 92 45.7
Duzib147G0940 Durio zibethinus HOM05D000048 ORTHO05D004674 1.2e-10 69.3 92 44.6
FvH4_6g38980 Fragaria vesca HOM05D000048 ORTHO05D004674 1.2e-10 69.3 92 45.7
FAN05G0622 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.2e-10 69.3 92 45.7
FAN14G3590 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.2e-10 69.3 92 45.7
Hma1.2p1_1405F.1_g281370 Hydrangea macrophylla HOM05D000048 ORTHO05D004674 1.2e-10 69.3 92 44.6
PGR042G1954 Punica granatum HOM05D000048 ORTHO05D004674 1.2e-10 69.3 92 45.7
Sabra05G0158100 Salix brachista HOM05D000048 ORTHO05D004674 1.2e-10 69.3 92 45.7
TWI14G0704 Tripterygium wilfordii HOM05D000048 ORTHO05D004674 1.2e-10 69.3 92 45.7
Aqoxy1G01670 Aquilegia oxysepala HOM05D000048 ORTHO05D004674 1.6e-10 68.9 92 45.7
Ca_06231_v3 Cicer arietinum L. HOM05D000048 ORTHO05D004674 1.6e-10 68.9 92 46.7
GSVIVG01020806001 Vitis vinifera HOM05D000048 ORTHO05D004674 1.6e-10 68.9 92 46.7
CSS0027444 Camellia sinensis var. sinensis HOM05D000048 ORTHO05D004674 2.0e-10 68.6 92 45.7
GSVIVG01020808001 Vitis vinifera HOM05D000048 ORTHO05D004674 2.0e-10 68.6 92 45.7
CANSAT64G0241 Cannabis sativa HOM05D000048 ORTHO05D004674 2.7e-10 68.2 92 43.5
AUR62015173 Chenopodium quinoa HOM05D000048 ORTHO05D004674 2.7e-10 68.2 92 45.7
AUR62017625 Chenopodium quinoa HOM05D000048 ORTHO05D004674 2.7e-10 68.2 92 45.7
Os12g0615700 Oryza sativa ssp. japonica HOM05D000048 ORTHO05D004674 2.7e-10 68.2 92 45.7
Rhsim12G0013800 Rhododendron simsii HOM05D000048 ORTHO05D004674 2.7e-10 68.2 92 43.5
VMungo0647G1089 Vigna mungo HOM05D000048 ORTHO05D004674 2.7e-10 68.2 92 43.5
Ah.01g013190 Amaranthus hybridus HOM05D000048 ORTHO05D004674 3.5e-10 67.8 92 45.7
EL10Ac9g22879 Beta vulgaris HOM05D000048 ORTHO05D004674 3.5e-10 67.8 92 45.7
Thecc.01G164800 Theobroma cacao HOM05D000048 ORTHO05D004674 3.5e-10 67.8 41 75.6
Cc05_g00460 Coffea canephora HOM05D000048 ORTHO05D004674 4.6e-10 67.4 92 44.6
Dinv11714 Davidia involucrata HOM05D000048 ORTHO05D004674 4.6e-10 67.4 92 43.5
TPR.G30689 Trifolium pratense HOM05D000048 ORTHO05D004674 4.6e-10 67.4 92 45.7
TWI12G0817 Tripterygium wilfordii HOM05D000048 ORTHO05D004674 4.6e-10 67.4 92 44.6
Cc05_g00390 Coffea canephora HOM05D000048 ORTHO05D004674 6.0e-10 67.0 92 43.5
Hma1.2p1_1909F.1_g307210 Hydrangea macrophylla HOM05D000048 ORTHO05D004674 6.0e-10 67.0 92 43.5
SEGI_13613 Sequoiadendron giganteum HOM05D000048 ORTHO05D004674 6.0e-10 67.0 90 45.6
Eucgr.A02047 Eucalyptus grandis HOM05D000048 ORTHO05D004674 7.8e-10 66.6 92 44.6
LjContig00049g0025635 Lotus japonicus HOM05D000048 ORTHO05D004674 7.8e-10 66.6 92 45.7
Peaxi162Scf00047g02333 Petunia axillaris HOM05D000048 ORTHO05D004674 7.8e-10 66.6 92 44.6
Phvul.008G197000 Phaseolus vulgaris HOM05D000048 ORTHO05D004674 7.8e-10 66.6 92 42.4
PGR042G0265 Punica granatum HOM05D000048 ORTHO05D004674 7.8e-10 66.6 92 44.6
QL04p060039 Quercus lobata HOM05D000048 ORTHO05D004674 7.8e-10 66.6 92 42.4
QL04p060066 Quercus lobata HOM05D000048 ORTHO05D004674 7.8e-10 66.6 92 44.6
Carub.0005s2579 Capsella rubella HOM05D000048 ORTHO05D004674 1.0e-09 66.2 92 43.5
Haze_13625 Corylus avellana HOM05D000048 ORTHO05D004674 1.0e-09 66.2 41 73.2
CARHR169440 Cardamine hirsuta HOM05D000048 ORTHO05D004674 1.3e-09 65.9 92 43.5
Phvul.006G028701 Phaseolus vulgaris HOM05D000048 ORTHO05D004674 1.3e-09 65.9 92 43.5
Phvul.L001777 Phaseolus vulgaris HOM05D000048 ORTHO05D004674 1.3e-09 65.9 92 43.5
Aa31LG10G13520 Aethionema arabicum HOM05D000048 ORTHO05D004674 1.7e-09 65.5 92 43.5
LjContig00049g0011307 Lotus japonicus HOM05D000048 ORTHO05D004674 1.7e-09 65.5 92 44.6
Sc15g0001190 Simmondsia chinensis HOM05D000048 ORTHO05D004674 1.7e-09 65.5 92 41.3
arahy.Tifrunner.gnm1.ann1.716UDI Arachis hypogaea HOM05D000048 ORTHO05D004674 2.3e-09 65.1 92 44.6
arahy.Tifrunner.gnm1.ann1.LUZ6WJ Arachis hypogaea HOM05D005129 ORTHO05D005585 2.3e-09 65.1 92 44.6
Glyma.14G032400 Glycine max HOM05D000048 ORTHO05D004674 2.3e-09 65.1 92 42.4
Hund08480 Selenicereus undatus HOM05D000048 ORTHO05D004674 2.3e-09 65.1 92 41.3
AL5G40910 Arabidopsis lyrata HOM05D000048 ORTHO05D004674 3.0e-09 64.7 92 43.5
arahy.Tifrunner.gnm1.ann1.FWRT0A Arachis hypogaea HOM05D000048 ORTHO05D004674 3.0e-09 64.7 92 44.6
Thhalv10005907m.g Eutrema salsugineum HOM05D000048 ORTHO05D004674 3.0e-09 64.7 92 43.5
BcaB02g07489 Brassica carinata HOM05D000048 ORTHO05D004674 3.9e-09 64.3 92 42.4
Lj6g0027629 Lotus japonicus HOM05D000048 ORTHO05D004674 3.9e-09 64.3 92 44.6
LjContig00049g0026376 Lotus japonicus HOM05D000048 ORTHO05D004674 3.9e-09 64.3 92 44.6
Sc15g0001200 Simmondsia chinensis HOM05D000048 ORTHO05D004674 3.9e-09 64.3 92 40.2
BcaC08g44951 Brassica carinata HOM05D000048 ORTHO05D004674 5.0e-09 63.9 92 42.4
A07p24420 Brassica napus HOM05D000048 ORTHO05D004674 5.0e-09 63.9 92 42.4
C06p25850 Brassica napus HOM05D000048 ORTHO05D004674 5.0e-09 63.9 92 42.4
BolC6t37746H Brassica oleracea HOM05D000048 ORTHO05D004674 5.0e-09 63.9 92 42.4
BraA07t30089Z Brassica rapa HOM05D000048 ORTHO05D004674 5.0e-09 63.9 92 42.4
Sp5g03950 Schrenkiella parvula HOM05D000048 ORTHO05D004674 5.0e-09 63.9 92 42.4
Manes.01G182000 Manihot esculenta HOM05D000048 ORTHO05D004674 6.6e-09 63.5 92 42.4
VMungo0540G1986 Vigna mungo HOM05D000048 ORTHO05D004674 6.6e-09 63.5 92 41.3
AT3G59030 Arabidopsis thaliana HOM05D000048 ORTHO05D004674 8.6e-09 63.2 92 42.4
Dinv01271 Davidia involucrata HOM05D000048 ORTHO05D004674 8.6e-09 63.2 92 43.5
FvH4_6g37810 Fragaria vesca HOM05D000048 ORTHO05D004674 8.6e-09 63.2 92 43.5
FAN02G3687 Fragaria x ananassa HOM05D000048 ORTHO05D004674 8.6e-09 63.2 92 43.5
FAN02G4396 Fragaria x ananassa HOM05D000048 ORTHO05D004674 8.6e-09 63.2 92 43.5
FAN04G1735 Fragaria x ananassa HOM05D000048 ORTHO05D004674 8.6e-09 63.2 92 43.5
FAN05G3021 Fragaria x ananassa HOM05D000048 ORTHO05D004674 8.6e-09 63.2 92 43.5
FAN09G2330 Fragaria x ananassa HOM05D000048 ORTHO05D004674 8.6e-09 63.2 92 43.5
FAN14G2985 Fragaria x ananassa HOM05D000048 ORTHO05D004674 8.6e-09 63.2 92 43.5
Nitab4.5_0002015g0100 Nicotiana tabacum HOM05D000048 ORTHO05D004674 8.6e-09 63.2 92 41.3
Nitab4.5_0004862g0020 Nicotiana tabacum HOM05D000048 ORTHO05D004674 8.6e-09 63.2 92 41.3
PSO541G4114 Papaver somniferum HOM05D000048 ORTHO05D004674 1.1e-08 62.8 92 42.4
PSO675G4319 Papaver somniferum HOM05D000048 ORTHO05D004674 1.1e-08 62.8 92 42.4
SEGI_11691 Sequoiadendron giganteum HOM05D000048 ORTHO05D004674 1.1e-08 62.8 42 69.0
SEGI_21123 Sequoiadendron giganteum HOM05D000048 ORTHO05D004674 1.5e-08 62.4 92 42.4
PGSC0003DMG400028825 Solanum tuberosum HOM05D000048 ORTHO05D004674 1.9e-08 62.0 92 41.3
Nn4g26623 Nelumbo nucifera HOM05D000048 ORTHO05D004674 2.5e-08 61.6 92 39.1
Medtr8g063590 Medicago truncatula HOM05D000048 ORTHO05D004674 3.3e-08 61.2 92 42.4
SEGI_08711 Sequoiadendron giganteum HOM05D000048 ORTHO05D004674 3.3e-08 61.2 42 69.0
Solyc12g006360.3 Solanum lycopersicum HOM05D000048 ORTHO05D004674 3.3e-08 61.2 92 41.3
Sopen12g002310 Solanum pennellii HOM05D000048 ORTHO05D004674 3.3e-08 61.2 92 41.3
Actinidia35481 Actinidia chinensis HOM05D000048 ORTHO05D004674 5.6e-08 60.5 92 39.1
CSS0033801 Camellia sinensis var. sinensis HOM05D000048 ORTHO05D026566 7.3e-08 60.1 97 40.2
Medtr5g087930 Medicago truncatula HOM05D000048 ORTHO05D004674 7.3e-08 60.1 40 65.0
SEGI_00802 Sequoiadendron giganteum HOM05D000048 ORTHO05D028396 9.5e-08 59.7 51 60.8
Actinidia37061 Actinidia chinensis HOM05D000048 ORTHO05D004674 1.6e-07 58.9 92 39.1
Medtr5g090280 Medicago truncatula HOM05D000048 ORTHO05D004674 1.6e-07 58.9 41 65.9
SEGI_32095 Sequoiadendron giganteum HOM05D000048 ORTHO05D004674 1.6e-07 58.9 42 66.7
SEGI_25025 Sequoiadendron giganteum HOM05D000048 ORTHO05D004674 2.1e-07 58.5 42 66.7
Lj4g0007477 Lotus japonicus HOM05D000048 ORTHO05D004674 2.3e-06 55.1 92 39.1
Oeu012370.1 Olea europaea HOM05D000048 ORTHO05D026566 2.3e-06 55.1 92 38.0
CSS0032750 Camellia sinensis var. sinensis HOM05D000048 ORTHO05D001179 3.1e-06 54.7 63 47.6
CSS0003302 Camellia sinensis var. sinensis HOM05D000048 ORTHO05D026566 6.8e-06 53.5 32 71.9


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