Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1098G021 Amborella trichopoda HOM05D018609 ORTHO05D019561 8.1e-155 551.2 499 100.0
Aqoxy1G01656 Aquilegia oxysepala HOM05D018609 ORTHO05D019561 6.6e-40 169.5 450 31.6
TAR629G1245 Trochodendron aralioides HOM05D018609 ORTHO05D019561 1.3e-35 155.2 447 49.2
Nn3g20313 Nelumbo nucifera HOM05D018609 ORTHO05D019561 7.6e-28 129.4 318 37.7
MBI18_g10589_MAGBIO Magnolia biondii HOM05D018609 ORTHO05D019561 1.3e-27 128.6 224 33.9
PSO541G4921 Papaver somniferum HOM05D018609 ORTHO05D019561 1.4e-18 98.6 341 51.6
PSO675G7793 Papaver somniferum HOM05D018609 ORTHO05D019561 4.3e-15 87.0 202 57.9
Hma1.2p1_0111F.1_g053850 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 5.1e-08 63.5 176 23.3
Hma1.2p1_0111F.1_g053860 Hydrangea macrophylla HOM05D000855 ORTHO05D008530 5.1e-08 63.5 176 23.3
Eucgr.K03209 Eucalyptus grandis HOM05D000855 ORTHO05D008530 1.5e-07 62.0 159 23.3
QL07p045308 Quercus lobata HOM05D000855 ORTHO05D008530 1.5e-07 62.0 176 22.7
MSTRG.19138 Avicennia marina HOM05D000855 ORTHO05D008530 2.0e-07 61.6 136 24.3
Migut.J00415 Erythranthe guttata HOM05D000855 ORTHO05D008530 2.6e-07 61.2 135 23.7
PSO339G3775 Papaver somniferum HOM05D000855 ORTHO05D008530 2.6e-07 61.2 159 23.3
TPR.G30250 Trifolium pratense HOM05D000855 ORTHO05D008530 3.3e-07 60.8 159 22.6
CARHR084060 Cardamine hirsuta HOM05D000855 ORTHO05D008530 4.4e-07 60.5 159 21.4
Nn2g12986 Nelumbo nucifera HOM05D000855 ORTHO05D008530 4.4e-07 60.5 159 22.6
Aqoxy4G03187 Aquilegia oxysepala HOM05D000855 ORTHO05D008530 5.7e-07 60.1 159 23.3
Psat6g067680 Pisum sativum HOM05D000855 ORTHO05D008530 5.7e-07 60.1 160 24.4
CSS0013853 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 7.4e-07 59.7 159 23.3
CSS0023086 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008530 7.4e-07 59.7 159 23.3
CAN.G1476.6 Capsicum annuum HOM05D000424 ORTHO05D000355 7.4e-07 59.7 92 37.0
Manes.08G003100 Manihot esculenta HOM05D000855 ORTHO05D008530 9.7e-07 59.3 157 23.6
EL10Ac7g17347 Beta vulgaris HOM05D000855 ORTHO05D008530 1.3e-06 58.9 159 24.5
Lj5g0021887 Lotus japonicus HOM05D000855 ORTHO05D008530 1.3e-06 58.9 159 22.0
GSVIVG01025536001 Vitis vinifera HOM05D000855 ORTHO05D008530 1.7e-06 58.5 160 25.0
FvH4_6g15290 Fragaria vesca HOM05D000855 ORTHO05D008530 2.2e-06 58.2 152 23.7
Cfa017505 Carpinus fangiana HOM05D000855 ORTHO05D008530 2.8e-06 57.8 157 21.7
Haze_20657 Corylus avellana HOM05D000855 ORTHO05D008530 2.8e-06 57.8 157 21.7
Potri.016G085300 Populus trichocarpa HOM05D000855 ORTHO05D008530 2.8e-06 57.8 159 23.9
Dinv35708 Davidia involucrata HOM05D000855 ORTHO05D008530 3.7e-06 57.4 159 22.0
FAN02G3427 Fragaria x ananassa HOM05D000855 ORTHO05D008530 3.7e-06 57.4 152 23.7
FAN09G2418 Fragaria x ananassa HOM05D000855 ORTHO05D008530 3.7e-06 57.4 155 23.2
Prupe.8G019300 Prunus persica HOM05D007083 ORTHO05D008801 3.7e-06 57.4 89 32.6
Sc20g0004090 Simmondsia chinensis HOM05D000855 ORTHO05D008530 3.7e-06 57.4 159 22.6
THA.LOC104810436 Tarenaya hassleriana HOM05D002453 ORTHO05D008746 3.7e-06 57.4 84 36.9
TAR369G0350 Trochodendron aralioides HOM05D000001 ORTHO05D000003 3.7e-06 57.4 87 39.1
Medtr1g066900 Medicago truncatula HOM05D000855 ORTHO05D008530 4.8e-06 57.0 159 21.4
THA.LOC104819595 Tarenaya hassleriana HOM05D007083 ORTHO05D008801 4.8e-06 57.0 86 34.9
AT3G09650 Arabidopsis thaliana HOM05D000855 ORTHO05D008530 6.3e-06 56.6 159 20.8
Ca_11448_v3 Cicer arietinum L. HOM05D000855 ORTHO05D008530 6.3e-06 56.6 159 22.0
FAN14G2211 Fragaria x ananassa HOM05D000855 ORTHO05D008530 6.3e-06 56.6 152 23.7
Glyma.10G049200 Glycine max HOM05D000855 ORTHO05D008530 6.3e-06 56.6 158 20.9
RcHm_v2.0_Chr2g0089541 Rosa chinensis HOM05D000001 ORTHO05D000003 6.3e-06 56.6 98 38.8
VMungo0720G3091 Vigna mungo HOM05D000855 ORTHO05D008530 6.3e-06 56.6 97 28.9
DCAR_003849 Daucus carota HOM05D000855 ORTHO05D008530 8.2e-06 56.2 160 23.8
DCAR_009287 Daucus carota HOM05D000855 ORTHO05D008530 8.2e-06 56.2 160 23.8


User provided reference genes

Program Settings