Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR1096G071 Amborella trichopoda HOM05D012411 ORTHO05D011070 4.4e-135 484.6 237 100.0
ATR1096G135 Amborella trichopoda HOM05D012411 ORTHO05D011070 4.1e-48 195.7 170 64.1
ATR1096G102 Amborella trichopoda HOM05D012411 ORTHO05D011070 4.4e-26 122.5 138 54.3
ATR0071G017 Amborella trichopoda HOM05D012411 ORTHO05D011070 4.9e-25 119.0 92 65.2
ATR1096G136 Amborella trichopoda HOM05D012411 ORTHO05D011070 2.3e-22 110.2 121 55.4
ATR1096G074 Amborella trichopoda HOM05D012411 ORTHO05D011070 3.5e-15 86.3 111 48.6
ATR0737G124 Amborella trichopoda HOM05D012411 ORTHO05D011070 6.0e-15 85.5 152 36.8
ATR0736G153 Amborella trichopoda HOM05D012411 ORTHO05D011070 4.3e-13 79.3 170 33.5
ATR0736G026 Amborella trichopoda HOM05D012411 ORTHO05D011070 9.6e-13 78.2 167 36.5
Prupe.1G170100 Prunus persica HOM05D000007 ORTHO05D000521 1.5e-10 70.9 177 28.8
Eucgr.H02735 Eucalyptus grandis HOM05D000007 ORTHO05D000017 2.0e-10 70.5 164 32.3
FAN12G0768 Fragaria x ananassa HOM05D000007 ORTHO05D000521 4.4e-10 69.3 172 28.5
Glyma.10G199800 Glycine max HOM05D000007 ORTHO05D000039 5.8e-10 68.9 159 34.0
MD04G1021100 Malus domestica HOM05D000007 ORTHO05D000521 9.9e-10 68.2 185 27.6
VMungo0720G0867 Vigna mungo HOM05D000007 ORTHO05D000039 6.4e-09 65.5 158 32.3
Eucgr.H02734 Eucalyptus grandis HOM05D000007 ORTHO05D000017 1.9e-08 63.9 162 31.5
Lj1C674T8 Lonicera japonica HOM05D000007 ORTHO05D000039 2.4e-08 63.5 167 32.9
ATR0681G217 Amborella trichopoda HOM05D015801 ORTHO05D011070 4.2e-08 62.8 167 27.5
Lj1A671T55 Lonicera japonica HOM05D000007 ORTHO05D000039 5.4e-08 62.4 166 31.9
RcHm_v2.0_Chr4g0412631 Rosa chinensis HOM05D000007 ORTHO05D000521 5.4e-08 62.4 166 28.3
Medtr1g094210 Medicago truncatula HOM05D000007 ORTHO05D000017 1.2e-07 61.2 155 29.7
ATR0681G080 Amborella trichopoda HOM05D015022 ORTHO05D011070 1.6e-07 60.8 192 27.6
CSS0001643 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.6e-07 60.8 164 26.8
TPR.G17061 Trifolium pratense HOM05D000007 ORTHO05D000017 2.7e-07 60.1 172 27.9
Lj2C804T8 Lonicera japonica HOM05D000007 ORTHO05D000039 3.5e-07 59.7 204 26.5
Manes.09G122100 Manihot esculenta HOM05D000007 ORTHO05D000039 3.5e-07 59.7 217 27.2
CiPaw.07G037900 Carya illinoinensis HOM05D000007 ORTHO05D000017 4.6e-07 59.3 161 28.6
Lalb_Chr20g0118571 Lupinus albus HOM05D000007 ORTHO05D000017 4.6e-07 59.3 181 30.4
Haze_03184 Corylus avellana HOM05D000007 ORTHO05D000039 7.9e-07 58.5 193 28.5
Duzib268G1516 Durio zibethinus HOM05D000007 ORTHO05D000039 7.9e-07 58.5 172 24.4
Glyma.02G188000 Glycine max HOM05D000007 ORTHO05D000017 7.9e-07 58.5 169 27.8
AL1G53520 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.0e-06 58.2 184 28.3
arahy.Tifrunner.gnm1.ann1.K4WWU7 Arachis hypogaea HOM05D000007 ORTHO05D000039 1.3e-06 57.8 168 30.4
Ciclev10006734m.g Citrus clementina HOM05D000007 ORTHO05D000017 1.3e-06 57.8 167 27.5
COL.COLO4_14882 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.3e-06 57.8 168 30.4
COL.COLO4_15939 Corchorus olitorius HOM05D000007 ORTHO05D000521 1.3e-06 57.8 176 29.5
COL.COLO4_23737 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.3e-06 57.8 169 29.0
Hma1.2p1_1837F.1_g304820 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.3e-06 57.8 177 25.4
QL07p009589 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-06 57.8 219 25.6
BcaB01g04749 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-06 57.4 177 29.4
BcaC01g06612 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-06 57.4 177 29.4
Dinv38239 Davidia involucrata HOM05D000171 ORTHO05D000101 1.7e-06 57.4 166 30.1
Eucgr.F02950 Eucalyptus grandis HOM05D000007 ORTHO05D000039 1.7e-06 57.4 223 27.4
FvH4_4g13100 Fragaria vesca HOM05D000007 ORTHO05D000521 1.7e-06 57.4 180 27.8
FAN12G3766 Fragaria x ananassa HOM05D000234 ORTHO05D001258 1.7e-06 57.4 180 27.8
QL07p009479 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-06 57.4 159 30.2
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 2.3e-06 57.0 160 28.1
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 2.3e-06 57.0 168 29.2
Dinv06539 Davidia involucrata HOM05D000007 ORTHO05D000039 2.3e-06 57.0 163 29.4
Lj1P653T16 Lonicera japonica HOM05D000007 ORTHO05D000039 2.3e-06 57.0 175 27.4
Lj8C33T15 Lonicera japonica HOM05D000664 ORTHO05D000491 2.3e-06 57.0 166 33.1
Lalb_Chr23g0278141 Lupinus albus HOM05D002809 ORTHO05D004563 2.3e-06 57.0 175 30.3
QL04p036314 Quercus lobata HOM05D000007 ORTHO05D000039 2.3e-06 57.0 196 26.5
QL07p013622 Quercus lobata HOM05D000007 ORTHO05D000039 2.3e-06 57.0 177 28.8
Sabra11G0123100 Salix brachista HOM05D000007 ORTHO05D000521 2.3e-06 57.0 176 27.8
ATR0693G387 Amborella trichopoda HOM05D007162 ORTHO05D007631 3.0e-06 56.6 165 29.7
arahy.Tifrunner.gnm1.ann1.FB190S Arachis hypogaea HOM05D000007 ORTHO05D000039 3.0e-06 56.6 168 29.8
Haze_02856 Corylus avellana HOM05D000007 ORTHO05D000039 3.0e-06 56.6 175 28.0
Dinv05848 Davidia involucrata HOM05D000007 ORTHO05D000521 3.0e-06 56.6 180 27.8
Duzib114G0947 Durio zibethinus HOM05D000007 ORTHO05D000039 3.0e-06 56.6 162 28.4
QL08p020282 Quercus lobata HOM05D000007 ORTHO05D000039 3.0e-06 56.6 208 25.0
AT1G47790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.9e-06 56.2 204 26.0
AUR62017742 Chenopodium quinoa HOM05D000007 ORTHO05D000039 3.9e-06 56.2 227 27.8
Lsat_1_v5_gn_4_176941 Lactuca sativa HOM05D000007 ORTHO05D000039 3.9e-06 56.2 168 28.6
PSO675G8333 Papaver somniferum HOM05D000007 ORTHO05D000676 3.9e-06 56.2 170 27.6
QL04p045652 Quercus lobata HOM05D000007 ORTHO05D000039 3.9e-06 56.2 215 28.4
BcaB01g03958 Brassica carinata HOM05D000171 ORTHO05D000101 5.1e-06 55.8 155 29.7
CAN.G58.20 Capsicum annuum HOM05D000007 ORTHO05D000017 5.1e-06 55.8 166 27.7
FAN11G1989 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.1e-06 55.8 184 27.2
A07p03320 Brassica napus HOM05D000171 ORTHO05D000101 6.6e-06 55.5 174 30.5
BolC3t13684H Brassica oleracea HOM05D000171 ORTHO05D000101 6.6e-06 55.5 177 28.8
BraA07t28133Z Brassica rapa HOM05D000171 ORTHO05D000101 6.6e-06 55.5 174 30.5
ECA234G2595 Erigeron canadensis HOM05D000007 ORTHO05D000039 6.6e-06 55.5 180 30.0
FvH4_3g18082 Fragaria vesca HOM05D000007 ORTHO05D000017 6.6e-06 55.5 165 25.5
FAN16G3618 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.6e-06 55.5 165 25.5
QL03p005922 Quercus lobata HOM05D000007 ORTHO05D000039 6.6e-06 55.5 221 23.5
QL04p064442 Quercus lobata HOM05D000007 ORTHO05D000039 6.6e-06 55.5 221 23.5
Sp5g04230 Schrenkiella parvula HOM05D000171 ORTHO05D000101 6.6e-06 55.5 167 30.5
PGSC0003DMG400018496 Solanum tuberosum HOM05D000007 ORTHO05D000039 6.6e-06 55.5 229 24.9
SGA_v2.0_scaffold66G22390 Striga asiatica HOM05D000007 ORTHO05D000039 6.6e-06 55.5 177 31.1
vmacro00492 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 6.6e-06 55.5 167 28.1
BolC7t40962H Brassica oleracea HOM05D000171 ORTHO05D000101 8.7e-06 55.1 170 31.8
COL.COLO4_25857 Corchorus olitorius HOM05D000007 ORTHO05D000521 8.7e-06 55.1 156 30.8
FAN22G1400 Fragaria x ananassa HOM05D000664 ORTHO05D000491 8.7e-06 55.1 222 27.0
Medtr1g054725 Medicago truncatula HOM05D000007 ORTHO05D000017 8.7e-06 55.1 174 31.0
Medtr4g031770 Medicago truncatula HOM05D000007 ORTHO05D000017 8.7e-06 55.1 159 28.9
Peaxi162Scf00608g00323 Petunia axillaris HOM05D000007 ORTHO05D000039 8.7e-06 55.1 160 28.8
Phvul.007G141400 Phaseolus vulgaris HOM05D000007 ORTHO05D000039 8.7e-06 55.1 150 30.7
QL07p009510 Quercus lobata HOM05D000007 ORTHO05D000039 8.7e-06 55.1 160 31.9
PGSC0003DMG400023054 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.7e-06 55.1 153 26.8
TPR.G40220 Trifolium pratense HOM05D000007 ORTHO05D000017 8.7e-06 55.1 171 28.7


User provided reference genes

Program Settings