Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0980G009 Amborella trichopoda HOM05D005112 ORTHO05D006681 7.7e-79 297.0 140 100.0
ATR0745G067 Amborella trichopoda HOM05D005112 ORTHO05D006681 5.4e-72 274.2 138 92.8
Aqoxy2G00366 Aquilegia oxysepala HOM05D005112 ORTHO05D006681 3.2e-40 168.7 139 54.7
CSS0041800 Camellia sinensis var. sinensis HOM05D005112 ORTHO05D006681 1.2e-39 166.8 136 55.1
PSO339G5424 Papaver somniferum HOM05D005112 ORTHO05D006681 7.8e-39 164.1 139 53.2
Hma1.2p1_1202F.1_g266810 Hydrangea macrophylla HOM05D005112 ORTHO05D006681 3.0e-38 162.2 136 54.4
Hma1.2p1_1202F.1_g266830 Hydrangea macrophylla HOM05D005112 ORTHO05D006681 3.0e-38 162.2 136 54.4
Dinv32028 Davidia involucrata HOM05D005112 ORTHO05D006681 3.9e-38 161.8 140 51.4
GSVIVG01013489001 Vitis vinifera HOM05D005112 ORTHO05D006681 8.7e-38 160.6 137 51.8
MBI09_g12849_MAGBIO Magnolia biondii HOM05D005112 ORTHO05D006681 3.3e-37 158.7 138 52.9
TPR.G27820 Trifolium pratense HOM05D005112 ORTHO05D006681 3.3e-37 158.7 132 53.0
Actinidia02264 Actinidia chinensis HOM05D005112 ORTHO05D006681 4.3e-37 158.3 136 50.7
RcHm_v2.0_Chr1g0324261 Rosa chinensis HOM05D005112 ORTHO05D006681 4.3e-37 158.3 136 52.9
CANSAT56G3144 Cannabis sativa HOM05D005112 ORTHO05D006681 5.6e-37 157.9 138 52.2
Prupe.2G035800 Prunus persica HOM05D005112 ORTHO05D006681 5.6e-37 157.9 136 52.9
PGR044G1764 Punica granatum HOM05D005112 ORTHO05D006681 5.6e-37 157.9 99 68.7
TAR636G2362 Trochodendron aralioides HOM05D005112 ORTHO05D006681 5.6e-37 157.9 136 50.0
Rhsim01G0124100 Rhododendron simsii HOM05D005112 ORTHO05D006681 7.3e-37 157.5 136 49.3
DCAR_006636 Daucus carota HOM05D005112 ORTHO05D006681 9.6e-37 157.1 133 51.9
MELO3C012472.2 Cucumis melo HOM05D005112 ORTHO05D006681 1.3e-36 156.8 132 53.8
MD02G1287500 Malus domestica HOM05D005112 ORTHO05D006681 1.3e-36 156.8 136 51.5
CsaV3_5G036760 Cucumis sativus L. HOM05D005112 ORTHO05D006681 1.6e-36 156.4 132 53.0
Medtr8g039160 Medicago truncatula HOM05D005112 ORTHO05D006681 1.6e-36 156.4 132 52.3
BcaB02g08488 Brassica carinata HOM05D005112 ORTHO05D006681 2.8e-36 155.6 98 64.3
Nn7g36668 Nelumbo nucifera HOM05D005112 ORTHO05D006681 2.8e-36 155.6 139 52.5
BcaC02g09069 Brassica carinata HOM05D005112 ORTHO05D006681 3.6e-36 155.2 98 65.3
A04p05380 Brassica napus HOM05D005112 ORTHO05D006681 3.6e-36 155.2 98 65.3
C04p38070 Brassica napus HOM05D005112 ORTHO05D006681 3.6e-36 155.2 98 65.3
BraA04t16238Z Brassica rapa HOM05D005112 ORTHO05D006681 3.6e-36 155.2 98 65.3
FvH4_7g03060 Fragaria vesca HOM05D005112 ORTHO05D006681 3.6e-36 155.2 112 60.7
COL.COLO4_20752 Corchorus olitorius HOM05D005112 ORTHO05D006681 4.8e-36 154.8 136 50.7
FAN06G0154 Fragaria x ananassa HOM05D005112 ORTHO05D006681 4.8e-36 154.8 112 60.7
Manes.04G159700 Manihot esculenta HOM05D005112 ORTHO05D006681 4.8e-36 154.8 138 50.7
TAR636G0153 Trochodendron aralioides HOM05D005112 ORTHO05D006681 4.8e-36 154.8 136 49.3
Prupe.2G035600 Prunus persica HOM05D005112 ORTHO05D006681 6.2e-36 154.5 136 52.2
FAN10G2928 Fragaria x ananassa HOM05D005112 ORTHO05D006681 1.1e-35 153.7 112 58.9
FAN10G3804 Fragaria x ananassa HOM05D005112 ORTHO05D006681 1.1e-35 153.7 112 58.9
Sc14g0005780 Simmondsia chinensis HOM05D005112 ORTHO05D006681 1.1e-35 153.7 139 48.9
Thecc.10G157000 Theobroma cacao HOM05D005112 ORTHO05D006681 1.1e-35 153.7 136 50.7
CDE08G0398 Ceratophyllum demersum HOM05D005112 ORTHO05D006681 1.4e-35 153.3 137 49.6
Eucgr.J01181 Eucalyptus grandis HOM05D005112 ORTHO05D006681 1.4e-35 153.3 98 65.3
Sed0008595 Sechium edule HOM05D005112 ORTHO05D006681 1.4e-35 153.3 134 53.0
Gohir.A06G175300 Gossypium hirsutum HOM05D005112 ORTHO05D006681 1.8e-35 152.9 136 51.5
Gohir.D06G185100 Gossypium hirsutum HOM05D005112 ORTHO05D006681 1.8e-35 152.9 136 51.5
Gorai.010G216500 Gossypium raimondii HOM05D005112 ORTHO05D006681 1.8e-35 152.9 136 51.5
Lalb_Chr01g0007751 Lupinus albus HOM05D005112 ORTHO05D006681 1.8e-35 152.9 101 60.4
Potri.001G027400 Populus trichocarpa HOM05D005112 ORTHO05D006681 1.8e-35 152.9 105 60.0
Sabra01G0019900 Salix brachista HOM05D005112 ORTHO05D006681 1.8e-35 152.9 105 61.0
BolC4t25382H Brassica oleracea HOM05D005112 ORTHO05D006681 3.1e-35 152.1 98 64.3
THA.LOC104824194 Tarenaya hassleriana HOM05D005112 ORTHO05D006681 4.0e-35 151.8 136 50.7
ECA238G0687 Erigeron canadensis HOM05D005112 ORTHO05D006681 5.3e-35 151.4 136 48.5
Migut.B01228 Erythranthe guttata HOM05D005112 ORTHO05D006681 5.3e-35 151.4 96 64.6
Lj9C664G6 Lonicera japonica HOM05D005112 ORTHO05D006681 5.3e-35 151.4 138 51.4
Lj3g0016153 Lotus japonicus HOM05D005112 ORTHO05D006681 5.3e-35 151.4 137 48.9
QL04p017903 Quercus lobata HOM05D005112 ORTHO05D006681 5.3e-35 151.4 137 52.6
FAN03G1408 Fragaria x ananassa HOM05D005112 ORTHO05D006681 6.9e-35 151.0 112 58.0
Nitab4.5_0002123g0040 Nicotiana tabacum HOM05D005112 ORTHO05D006681 6.9e-35 151.0 136 49.3
Psat4g144800 Pisum sativum HOM05D005112 ORTHO05D006681 6.9e-35 151.0 137 48.2
Thhalv10010080m.g Eutrema salsugineum HOM05D005112 ORTHO05D006681 9.0e-35 150.6 98 63.3
Peaxi162Scf00767g00521 Petunia axillaris HOM05D005112 ORTHO05D006681 9.0e-35 150.6 136 50.0
Carub.0005s2104 Capsella rubella HOM05D005112 ORTHO05D006681 1.2e-34 150.2 98 64.3
Ca_23958_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 1.2e-34 150.2 137 48.9
Ca_30885_v3 Cicer arietinum L. HOM05D005112 ORTHO05D006681 1.2e-34 150.2 137 48.9
AUR62032651 Chenopodium quinoa HOM05D005112 ORTHO05D006681 1.5e-34 149.8 136 52.2
Lsat_1_v5_gn_2_64381 Lactuca sativa HOM05D005112 ORTHO05D006681 1.5e-34 149.8 134 50.0
Nitab4.5_0000013g0140 Nicotiana tabacum HOM05D005112 ORTHO05D006681 1.5e-34 149.8 136 47.8
HanXRQChr14g0446561 Helianthus annuus HOM05D005112 ORTHO05D006681 2.0e-34 149.4 138 49.3
AL5G35490 Arabidopsis lyrata HOM05D005112 ORTHO05D006681 2.6e-34 149.1 95 64.2
Cpa.g.sc540.3 Carica papaya HOM05D005112 ORTHO05D006681 2.6e-34 149.1 141 51.1
Potri.003G196500 Populus trichocarpa HOM05D005112 ORTHO05D006681 2.6e-34 149.1 112 55.4
ClCG05G026800 Citrullus lanatus HOM05D005112 ORTHO05D006681 4.5e-34 148.3 132 50.8
Sabra03G0146500 Salix brachista HOM05D005112 ORTHO05D006681 4.5e-34 148.3 99 60.6
Aa31LG10G13430 Aethionema arabicum HOM05D005112 ORTHO05D006681 5.8e-34 147.9 95 64.2
Cfa010916 Carpinus fangiana HOM05D005112 ORTHO05D006681 5.8e-34 147.9 113 55.8
AUR62026862 Chenopodium quinoa HOM05D005112 ORTHO05D006681 5.8e-34 147.9 136 50.7
Sp5g07980 Schrenkiella parvula HOM05D005112 ORTHO05D006681 7.6e-34 147.5 95 62.1
AT3G54440 Arabidopsis thaliana HOM05D005112 ORTHO05D006681 9.9e-34 147.1 98 63.3
Glyma.13G197000 Glycine max HOM05D005112 ORTHO05D006681 9.9e-34 147.1 138 48.6
Solyc08g014480.4 Solanum lycopersicum HOM05D005112 ORTHO05D006681 9.9e-34 147.1 136 47.8
arahy.Tifrunner.gnm1.ann1.LQLC9G Arachis hypogaea HOM05D005112 ORTHO05D006681 1.3e-33 146.7 137 48.9
MSTRG.20515 Avicennia marina HOM05D005112 ORTHO05D006681 1.3e-33 146.7 95 61.1
Sopen08g005470 Solanum pennellii HOM05D005112 ORTHO05D006681 1.3e-33 146.7 136 47.8
TWI38G0195 Tripterygium wilfordii HOM05D005112 ORTHO05D006681 1.7e-33 146.4 112 52.7
vmacro12696 Vaccinium macrocarpon HOM05D005112 ORTHO05D006681 2.2e-33 146.0 136 45.6
Cc02_g30230 Coffea canephora HOM05D005112 ORTHO05D006681 2.9e-33 145.6 138 48.6
CAN.G176.1 Capsicum annuum HOM05D005112 ORTHO05D006681 3.8e-33 145.2 112 55.4
Mapoly0086s0033 Marchantia polymorpha HOM05D005112 ORTHO05D006681 3.8e-33 145.2 97 59.8
Phvul.011G206800 Phaseolus vulgaris HOM05D005112 ORTHO05D006681 8.4e-33 144.1 138 48.6
Duzib114G0621 Durio zibethinus HOM05D005112 ORTHO05D006681 3.2e-32 142.1 136 49.3
VMungo1127G0803 Vigna mungo HOM05D005112 ORTHO05D006681 3.2e-32 142.1 138 47.1
Os01g0952600 Oryza sativa ssp. japonica HOM05D005112 ORTHO05D006681 4.2e-32 141.7 139 46.8
arahy.Tifrunner.gnm1.ann1.2RH035 Arachis hypogaea HOM05D005112 ORTHO05D006681 5.4e-32 141.4 137 47.4
EL10Ac2g02802 Beta vulgaris HOM05D005112 ORTHO05D006681 5.4e-32 141.4 128 50.8
Atru.chr12.1338 Acer truncatum HOM05D005112 ORTHO05D006681 9.3e-32 140.6 88 64.8
CiPaw.13G013600 Carya illinoinensis HOM05D005112 ORTHO05D006681 2.7e-31 139.0 113 52.2
unitig_22.g5425 Utricularia gibba HOM05D005112 ORTHO05D006681 1.8e-30 136.3 96 57.3
Pp3c7_1630 Physcomitrium patens HOM05D005112 ORTHO05D006681 2.3e-30 136.0 107 53.3
Ciclev10027821m.g Citrus clementina HOM05D005112 ORTHO05D006681 5.1e-30 134.8 137 46.7
AagrBONN_evm.TU.Sc2ySwM_368.212 Anthoceros agrestis HOM05D005112 ORTHO05D006681 1.9e-29 132.9 93 57.0
SGA_v2.0_scaffold124G33611 Striga asiatica HOM05D005112 ORTHO05D006681 9.6e-29 130.6 103 54.4
Zm00001eb140720 Zea mays HOM05D005112 ORTHO05D006681 1.6e-28 129.8 99 54.5
SMO266G0060 Selaginella moellendorffii HOM05D005112 ORTHO05D006681 2.8e-28 129.0 96 55.2
CBR_g32018 Chara braunii HOM05D005112 ORTHO05D006681 7.9e-23 110.9 99 47.5
Cre08.g379450 Chlamydomonas reinhardtii HOM05D005112 ORTHO05D006681 3.0e-14 82.4 93 43.0


User provided reference genes

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