Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0827G035 Amborella trichopoda HOM05D005234 ORTHO05D006583 7.0e-84 313.9 159 100.0
Nn2g10556 Nelumbo nucifera HOM05D005234 ORTHO05D006583 4.3e-41 171.8 158 58.2
CSS0021401 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 6.8e-39 164.5 155 55.5
SEGI_06338 Sequoiadendron giganteum HOM05D005234 ORTHO05D006583 8.9e-39 164.1 156 55.1
CSS0032920 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 1.5e-38 163.3 155 55.5
COL.COLO4_05802 Corchorus olitorius HOM05D005234 ORTHO05D006583 4.4e-38 161.8 155 55.5
Lj8A92T86 Lonicera japonica HOM05D005234 ORTHO05D006583 4.4e-38 161.8 151 55.0
Aqoxy4G03097 Aquilegia oxysepala HOM05D005234 ORTHO05D006583 7.5e-38 161.0 156 53.2
GSVIVG01032632001 Vitis vinifera HOM05D005234 ORTHO05D006583 1.7e-37 159.8 156 55.8
QL08p057492 Quercus lobata HOM05D005234 ORTHO05D006583 2.2e-37 159.5 156 53.8
CiPaw.01G279400 Carya illinoinensis HOM05D005234 ORTHO05D006583 3.7e-37 158.7 155 53.5
Cpa.g.sc1.299 Carica papaya HOM05D005234 ORTHO05D006583 4.9e-37 158.3 153 52.9
Manes.07G106500 Manihot esculenta HOM05D005234 ORTHO05D006583 6.4e-37 157.9 154 51.9
Sabra08G0033600 Salix brachista HOM05D005234 ORTHO05D006583 1.1e-36 157.1 158 53.2
CANSAT56G3438 Cannabis sativa HOM05D005234 ORTHO05D006583 1.4e-36 156.8 157 53.5
Actinidia38226 Actinidia chinensis HOM05D005234 ORTHO05D006583 2.4e-36 156.0 155 56.1
PSO063G5764 Papaver somniferum HOM05D005234 ORTHO05D006583 2.4e-36 156.0 158 51.3
Cfa001561 Carpinus fangiana HOM05D005234 ORTHO05D006583 3.2e-36 155.6 156 52.6
RcHm_v2.0_Chr1g0364981 Rosa chinensis HOM05D005234 ORTHO05D006583 7.1e-36 154.5 156 50.6
Carub.0005s2171 Capsella rubella HOM05D005234 ORTHO05D006583 1.2e-35 153.7 155 54.2
Ciclev10032643m.g Citrus clementina HOM05D005234 ORTHO05D006583 2.7e-35 152.5 156 52.6
Haze_16968 Corylus avellana HOM05D005234 ORTHO05D006583 2.7e-35 152.5 156 51.3
MD01G1116500 Malus domestica HOM05D005234 ORTHO05D006583 2.7e-35 152.5 156 51.9
BcaB01g00128 Brassica carinata HOM05D005234 ORTHO05D006583 6.0e-35 151.4 155 50.3
EL10Ac2g03507 Beta vulgaris HOM05D005234 ORTHO05D006583 7.8e-35 151.0 154 53.9
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 2.3e-34 149.4 156 49.4
SalBow4G2780 Salvia bowleyana HOM05D005234 ORTHO05D006583 2.3e-34 149.4 153 49.7
AL5G36200 Arabidopsis lyrata HOM05D005234 ORTHO05D006583 3.0e-34 149.1 155 51.6
CARHR165100 Cardamine hirsuta HOM05D005234 ORTHO05D006583 3.0e-34 149.1 156 50.6
Sopen06g012740 Solanum pennellii HOM05D005234 ORTHO05D006583 5.1e-34 148.3 152 51.3
Duzib114G0593 Durio zibethinus HOM05D005234 ORTHO05D006583 6.6e-34 147.9 155 53.5
Aa31LG10G10060 Aethionema arabicum HOM05D005234 ORTHO05D006583 8.6e-34 147.5 155 49.7
AUR62025541 Chenopodium quinoa HOM05D005234 ORTHO05D006583 8.6e-34 147.5 154 51.9
AUR62042662 Chenopodium quinoa HOM05D005234 ORTHO05D006583 1.5e-33 146.7 158 52.5
Gohir.A05G352700 Gossypium hirsutum HOM05D005234 ORTHO05D006583 1.9e-33 146.4 155 52.9
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.9e-33 146.4 156 48.7
Medtr1g115980 Medicago truncatula HOM05D005234 ORTHO05D006583 2.5e-33 146.0 155 50.3
CDE04G1829 Ceratophyllum demersum HOM05D005234 ORTHO05D006583 3.3e-33 145.6 153 54.2
VMungo0720G1519 Vigna mungo HOM05D005234 ORTHO05D006583 4.3e-33 145.2 156 51.3
HanXRQChr14g0460751 Helianthus annuus HOM05D005234 ORTHO05D006583 7.3e-33 144.4 157 49.7
Thhalv10010346m.g Eutrema salsugineum HOM05D005234 ORTHO05D006583 9.5e-33 144.1 155 48.4
Ca_11325_v3 Cicer arietinum L. HOM05D005234 ORTHO05D006583 1.2e-32 143.7 156 50.6
Glyma.10G292500 Glycine max HOM05D005234 ORTHO05D006583 1.2e-32 143.7 156 49.4
Lalb_Chr06g0164091 Lupinus albus HOM05D005234 ORTHO05D006583 1.6e-32 143.3 156 52.6
BcaC07g39833 Brassica carinata HOM05D005234 ORTHO05D006583 2.1e-32 142.9 155 50.3
C08p30350 Brassica napus HOM05D005234 ORTHO05D006583 2.1e-32 142.9 155 50.3
TPR.G10401 Trifolium pratense HOM05D005234 ORTHO05D006583 2.1e-32 142.9 156 49.4
AT3G55080 Arabidopsis thaliana HOM05D005234 ORTHO05D006583 2.8e-32 142.5 156 53.2
Cc02_g08680 Coffea canephora HOM05D005234 ORTHO05D006583 3.6e-32 142.1 159 50.9
Gorai.012G067000 Gossypium raimondii HOM05D005234 ORTHO05D006583 3.6e-32 142.1 155 51.6
Sp5g07340 Schrenkiella parvula HOM05D005234 ORTHO05D006583 3.6e-32 142.1 155 49.0
Gohir.D04G060251 Gossypium hirsutum HOM05D005234 ORTHO05D006583 8.1e-32 141.0 155 51.0
Phvul.007G007800 Phaseolus vulgaris HOM05D005234 ORTHO05D006583 1.4e-31 140.2 156 51.9
THA.LOC104809996 Tarenaya hassleriana HOM05D005234 ORTHO05D006583 1.4e-31 140.2 155 49.0
arahy.Tifrunner.gnm1.ann1.E1ZVHS Arachis hypogaea HOM05D005234 ORTHO05D006583 2.3e-31 139.4 155 49.7
BolC8t50657H Brassica oleracea HOM05D005234 ORTHO05D006583 2.3e-31 139.4 155 49.0
A09p48110 Brassica napus HOM05D005234 ORTHO05D006583 3.1e-31 139.0 155 49.0
CsaV3_5G026250 Cucumis sativus L. HOM05D005234 ORTHO05D006583 3.1e-31 139.0 155 47.1
ClCG09G020200 Citrullus lanatus HOM05D005234 ORTHO05D006583 8.9e-31 137.5 155 47.1
arahy.Tifrunner.gnm1.ann1.IBY72V Arachis hypogaea HOM05D005234 ORTHO05D006583 1.5e-30 136.7 155 49.7
Migut.A00396 Erythranthe guttata HOM05D005234 ORTHO05D006583 1.5e-30 136.7 157 49.7
Sed0019162 Sechium edule HOM05D005234 ORTHO05D006583 4.4e-30 135.2 155 48.4
TWI63G0851 Tripterygium wilfordii HOM05D005234 ORTHO05D006583 7.6e-30 134.4 151 48.3
SGA_v2.0_scaffold193G40685 Striga asiatica HOM05D005234 ORTHO05D006583 1.3e-29 133.7 155 46.5
HPP92_021203 Vanilla planifolia HOM05D005234 ORTHO05D006583 1.7e-29 133.3 155 43.9
MELO3C025470.2 Cucumis melo HOM05D005234 ORTHO05D006583 2.2e-29 132.9 155 45.8
Eucgr.J01148 Eucalyptus grandis HOM05D005234 ORTHO05D006583 2.2e-29 132.9 155 47.7
PGR044G0090 Punica granatum HOM05D005234 ORTHO05D006583 3.7e-29 132.1 155 47.7
Dinv31388 Davidia involucrata HOM05D005234 ORTHO05D006583 1.4e-28 130.2 135 52.6
BraA09t40265Z Brassica rapa HOM05D005234 ORTHO05D006583 9.2e-28 127.5 170 44.1
Mapoly0068s0008 Marchantia polymorpha HOM05D005234 ORTHO05D006583 9.2e-28 127.5 158 44.3
Hund06032 Selenicereus undatus HOM05D005234 ORTHO05D006583 1.6e-27 126.7 137 49.6
Potri.008G047400 Populus trichocarpa HOM05D005234 ORTHO05D006583 8.6e-26 120.9 137 48.2
Nitab4.5_0000271g0220 Nicotiana tabacum HOM05D005234 ORTHO05D006583 4.3e-25 118.6 136 47.8
Pp3c3_27330 Physcomitrium patens HOM05D005234 ORTHO05D006583 2.1e-24 116.3 154 42.9
FAN01G2148 Fragaria x ananassa HOM05D005234 ORTHO05D006583 3.6e-24 115.5 135 47.4
FAN01G2697 Fragaria x ananassa HOM05D005234 ORTHO05D006583 3.6e-24 115.5 135 47.4
SMO141G0013 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 1.4e-23 113.6 155 41.3
Solyc06g036670.2 Solanum lycopersicum HOM05D005234 ORTHO05D006583 6.8e-23 111.3 117 48.7
Peaxi162Scf00629g00122 Petunia axillaris HOM05D005234 ORTHO05D006583 7.6e-22 107.8 138 47.1
FAN06G4140 Fragaria x ananassa HOM05D005234 ORTHO05D006583 1.7e-21 106.7 102 52.0
FAN06G4823 Fragaria x ananassa HOM05D005234 ORTHO05D006583 2.9e-21 105.9 102 52.0
unitig_26.g8857 Utricularia gibba HOM05D005234 ORTHO05D006583 4.9e-21 105.1 153 41.2
Hma1.2p1_0348F.1_g131710 Hydrangea macrophylla HOM05D005234 ORTHO05D006583 9.3e-20 100.9 90 57.8
FAN03G0311 Fragaria x ananassa HOM05D002912 ORTHO05D003191 1.1e-17 94.0 108 48.1
Pp3c19_10210 Physcomitrium patens HOM05D005234 ORTHO05D006583 1.9e-17 93.2 148 41.2
Os01g0976450 Oryza sativa ssp. japonica HOM05D005234 ORTHO05D006583 3.1e-15 85.9 100 45.0
BcaC07g39828 Brassica carinata HOM05D005234 ORTHO05D006583 1.5e-14 83.6 137 39.4
BolC8t50642H Brassica oleracea HOM05D005234 ORTHO05D006583 1.5e-14 83.6 137 39.4
BolC8t50645H Brassica oleracea HOM05D005234 ORTHO05D006583 1.5e-14 83.6 137 39.4
BolC8t50648H Brassica oleracea HOM05D005234 ORTHO05D006583 1.5e-14 83.6 137 39.4
A09p32550 Brassica napus HOM05D005234 ORTHO05D006583 5.8e-14 81.6 155 36.1
Sc09g0006880 Simmondsia chinensis HOM05D005234 ORTHO05D006583 9.9e-14 80.9 87 49.4
Atru.chr12.596 Acer truncatum HOM05D005234 ORTHO05D006583 8.4e-13 77.8 71 54.9
Nitab4.5_0006265g0070 Nicotiana tabacum HOM05D005234 ORTHO05D006583 1.1e-12 77.4 134 36.6
Mapoly0004s0119 Marchantia polymorpha HOM05D034728 ORTHO05D006583 3.2e-12 75.9 117 38.5
SMO340G0223 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 4.2e-12 75.5 152 33.6
SMO180G0001 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 5.4e-12 75.1 152 34.9
Mapoly0004s0106 Marchantia polymorpha HOM05D034728 ORTHO05D006583 6.0e-11 71.6 117 36.8
SMO348G0083 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 6.6e-10 68.2 150 30.0
MD01G1117100 Malus domestica HOM05D005234 ORTHO05D006583 6.9e-07 58.2 157 31.2
vmacro07107 Vaccinium macrocarpon HOM05D005234 ORTHO05D006583 6.9e-07 58.2 54 57.4
SMO367G0191 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 5.8e-06 55.1 146 27.4


User provided reference genes

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